EWM27368.1, cds3305 (CDS) Nannochloropsis gaditana

Overview
NameEWM27368.1
Unique Namecds3305
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:92601..92881 -
Alignment locationCM002461.1:92421..92504 -
Alignment locationCM002461.1:92235..92322 -
Alignment locationCM002461.1:92059..92156 -
Alignment locationCM002461.1:91788..91882 -
Alignment locationCM002461.1:91547..91650 -
Alignment locationCM002461.1:91309..91366 -
Alignment locationCM002461.1:91100..91190 -
Alignment locationCM002461.1:90646..90749 -
Alignment locationCM002461.1:90421..90509 -
Alignment locationCM002461.1:90241..90327 -
Alignment locationCM002461.1:90010..90093 -
Alignment locationCM002461.1:89843..89929 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27368.1
Productatp-dependent protease la
Orig transcript idgnl|cribi|Naga_100216g5.230.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:92601..92881 -
CM002461.1supercontigCM002461.1:92421..92504 -
CM002461.1supercontigCM002461.1:92235..92322 -
CM002461.1supercontigCM002461.1:92059..92156 -
CM002461.1supercontigCM002461.1:91788..91882 -
CM002461.1supercontigCM002461.1:91547..91650 -
CM002461.1supercontigCM002461.1:91309..91366 -
CM002461.1supercontigCM002461.1:91100..91190 -
CM002461.1supercontigCM002461.1:90646..90749 -
CM002461.1supercontigCM002461.1:90421..90509 -
CM002461.1supercontigCM002461.1:90241..90327 -
CM002461.1supercontigCM002461.1:90010..90093 -
CM002461.1supercontigCM002461.1:89843..89929 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0004252serine-type endopeptidase activity
GO:0004176ATP-dependent peptidase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0016043cellular component organization
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0030163protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005777peroxisome
Vocabulary: INTERPRO
TermDefinition
IPR027065Lon_Prtase
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|585109590|gb|EWM27368.1| (atp-dependent protease la [Nannochloropsis gaditana])

HSP 1 Score: 906.36 bits (2341), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0
Query:    1 MGPSQWPSSGSYAFSLLALLSSPRPSHTHFLPPRVATLQSPLPPLCLPPLSRFRFLPRPPQASPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPR 449
            MGPSQWPSSGSYAFSLLALLSSPRPSHTHFLPPRVATLQSPLPPLCLPPLSRFRFLPRPPQASPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPR
Sbjct:    1 MGPSQWPSSGSYAFSLLALLSSPRPSHTHFLPPRVATLQSPLPPLCLPPLSRFRFLPRPPQASPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPR 449          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|299471164|emb|CBN79021.1| (ATP-dependent protease La [Ectocarpus siliculosus])

HSP 1 Score: 491.5 bits (1264), Expect = 6.130e-160
Identity = 234/385 (60.78%), Postives = 300/385 (77.92%), Query Frame = 0
Query:   62 ASPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIV 446
            ASP A+AD L + +N+P   KQ +LEE  LE RLR  LEL+REQ  ++ ++SKI++EVE +L++R REYYLRQQLK I+ +LGEE   SE D++  L  +++A  LP E    A+++L RLKRMQ SQPE++V+RTYLE + +LPW                 + V E  +D+R  + QLD+DH+GL KVK+RI+EYIAVRSL    KG ILCLVGPPGVGKTSLGRSIA AL R+FQRLSLGGVHDEAEIRGHRRTYIGA+PG I++C+++AGT +P+ LLDEVDK+GS++RGGDPSAA+LEVLDPEQN +FTDHY+N+P+DLS V F+ATAN+ D IPEPLLDR+EVI++PGYT+EEKV IAE YLIPKQ+  NG+  EH+++
Sbjct:  222 ASPGAVADVLASSINIPTNQKQAILEETSLEKRLRRVLELVREQTRVLSIASKINSEVEGKLNSRHREYYLRQQLKAIRSELGEEGGSSEGDEVAALEAKIEAAGLPPEASKVAKRDLSRLKRMQASQPEYTVIRTYLETVSELPW-----------------NRVSEETYDIRRAQRQLDKDHYGLNKVKQRIVEYIAVRSLLSDSKGSILCLVGPPGVGKTSLGRSIAAALNRKFQRLSLGGVHDEAEIRGHRRTYIGAMPGGIVRCLRRAGTRNPVMLLDEVDKIGSNVRGGDPSAALLEVLDPEQNDSFTDHYVNVPFDLSSVLFVATANKVDAIPEPLLDRLEVIHIPGYTLEEKVKIAEAYLIPKQMKKNGVGAEHMLL 589          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|1027002851|ref|XP_016606582.1| (ATP-dependent protease La [Spizellomyces punctatus DAOM BR117] >gi|907092462|gb|KNC98542.1| ATP-dependent protease La [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 437.573 bits (1124), Expect = 2.055e-142
Identity = 219/407 (53.81%), Postives = 285/407 (70.02%), Query Frame = 0
Query:   38 LQSPLPPLCLPPLSRFRFLPRPPQASPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHV 444
            L + L  L LPP    +         P  LAD   + ++V +E K ++LE   ++ R+   LEL+  Q++++K+S K+ + VE +L  +QRE+YLRQQL  IK++LGE +D  EEDD+ +L  R+    LP E   AAE+ELRRLKRM PS  E+ VVRTYLEW+ +LPW     E +  D              D+    +QLD DH GL KVK RILEY+AVR L + LKGPILC +GPPGVGKTSLG+S+A ALGR+F R+SLGGV DEAEIRGHRRTYIGALPG I+Q +++ G  +P+ LLDE+DKLG   R GDPS+A+LEVLDPEQNSTFTDHYLN+P+DLS V F+ATAN  DTIP PL DRMEVI +PGYT +EK+ IA+++L+PKQ+ A+G+ P+ +
Sbjct:  188 LANVLSQLQLPPTVLNQLRQMLDSTPPGQLADLFASMIDVSMEEKLQILETIDVKTRITRTLELLTRQIQVLKISQKLQSTVESKLGKKQREFYLRQQLDAIKKELGESDD-QEEDDVADLTKRISEAKLPEEATKAAERELRRLKRMHPSMAEYQVVRTYLEWLSELPW-----EKQTEDV------------MDIARARSQLDEDHFGLEKVKTRILEYLAVRKLKQDLKGPILCFLGPPGVGKTSLGKSLANALGRKFHRISLGGVRDEAEIRGHRRTYIGALPGRIIQGLRRCGVNNPVILLDEIDKLGHDAR-GDPSSALLEVLDPEQNSTFTDHYLNVPFDLSNVLFIATANDADTIPGPLFDRMEVIRIPGYTFDEKLHIAKRHLLPKQIKAHGIEPDEI 575          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|672820972|gb|KFH65868.1| (ATP-dependent protease La [Mortierella verticillata NRRL 6337])

HSP 1 Score: 433.335 bits (1113), Expect = 2.257e-140
Identity = 215/387 (55.56%), Postives = 279/387 (72.09%), Query Frame = 0
Query:   64 PSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTR---SLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVT 447
            P  + D L++ +    + K  +LE   L+ R+  A+EL+  Q+ ++K+S K+ + VE +L+ +QRE+YLRQQ+  IKE+LGE+ D SEED+MT + NRL A  LP EV+ AA++E++RLK+MQP+  E+SV+R YL+W+ DLPW                 S   E   DV     QL+ DHHGL KVKRRILEY+AV  L +    +KGPILCLVGPPGVGKTSLGRSIATA+GR+F R+SLGGV DE+EIRGHRRTY+GALPG I+  +KK    +P+FLLDE+DK+GS    GDPSAA LEVLDPEQN+TFTDHYLN+P+DLS++ F+ATAN  DTIP PLLDRME+I +PGYT  EK+ IA  +L+PKQ+  +GLS   V VT
Sbjct:  245 PGQVVDLLMSTIESTYDEKITILEATDLKERIVKAIELLTRQIHVLKISQKVHDNVEGKLNKKQREFYLRQQMAAIKEELGEK-DSSEEDEMTTIENRLTAANLPPEVQKAADREIKRLKKMQPASSEYSVIRNYLDWLGDLPW-----------------SKSSEDILDVERARKQLNDDHHGLEKVKRRILEYLAVTKLQQLKGDVKGPILCLVGPPGVGKTSLGRSIATAMGRKFHRISLGGVWDESEIRGHRRTYVGALPGLIIHGLKKCEVNNPVFLLDEIDKVGSRGHHGDPSAAFLEVLDPEQNNTFTDHYLNVPFDLSKILFIATANSVDTIPAPLLDRMELITIPGYTYAEKLAIATNHLLPKQIQLHGLSESDVQVT 613          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|575482646|ref|XP_006680617.1| (hypothetical protein BATDEDRAFT_12969 [Batrachochytrium dendrobatidis JAM81] >gi|328768691|gb|EGF78737.1| hypothetical protein BATDEDRAFT_12969 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 424.091 bits (1089), Expect = 7.885e-140
Identity = 202/384 (52.60%), Postives = 277/384 (72.14%), Query Frame = 0
Query:   64 PSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVT 447
            P  LAD   + +++ L+ K  +LE   L+ RL   + L+  Q++++K+S K+ + V++RL  +QRE+ LR+QL+ IK++LGE +DG + DD+ +L  R+    LP E   AA++EL+RL RM P+  E+ V+RTYLEW+ +LPW  K  +N                  D+      LD DHHGL +VK R++EY+AVR L + L+GPILCLVGPPGVGKTSLG+SIA ALGR+F R+SLGG+HDEAEIRGHRRTY+G+LPG I+Q +++ G  +P+ LLDE+DKLG   R GDPS+A+LEVLDPEQNSTFTDHYL +P++LS V F+ATAN  DTIP PLLDRMEV+ + GYT++EK+ IA QYL+PKQ+ A+GL+ +HV + 
Sbjct:    7 PGQLADLFTSMIDLTLDEKLEILEMVDLKPRLTKVILLLNRQLQVLKISQKLQSTVQNRLGQKQREFLLREQLEAIKKELGENDDGKDADDVVDLTKRIAESKLPEEPLRAAQRELKRLSRMNPNMSEYQVIRTYLEWMAELPWSQKTPDN-----------------LDISHARGILDHDHHGLDRVKLRVIEYLAVRKLKQDLRGPILCLVGPPGVGKTSLGKSIANALGRKFHRISLGGIHDEAEIRGHRRTYLGSLPGLIVQGLRQCGVNNPVLLLDEIDKLGHDYR-GDPSSALLEVLDPEQNSTFTDHYLGVPFNLSNVLFIATANDMDTIPAPLLDRMEVVQISGYTVDEKLSIARQYLLPKQIHAHGLAEDHVKIN 372          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|1032645648|gb|OAQ26963.1| (ATP-dependent protease La [Mortierella elongata AG-77])

HSP 1 Score: 429.098 bits (1102), Expect = 3.395e-139
Identity = 220/417 (52.76%), Postives = 289/417 (69.30%), Query Frame = 0
Query:   35 VATLQS-PLPPLCLPPLSRFRFLPRPPQASPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTR---SLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVT 447
            V+ LQS  LP   L  L +F          P  + D L++ +   L+ K  +LE   L+ R+  A+EL+  Q+ ++K+S K+ + VE +L+ +QRE+YLRQQ+  IKE+LGE+ D  E+D+MT++ +RL A  LP +V+ AA++EL+RLK+MQPS  E+SV+R YL+W+ DLPW                 +   E   DV     QL+ DHHGL KVKRRILEY+AV  L +    ++GPILCLVGPPGVGKTSLGRSIA+A+GR+F R+SLGGV DE+EIRGHRRTY+GALPG I+  +KK    +P+FLLDE+DK+GS    GDPSAA LEVLDPEQNSTFTDHYLN+P+DLS++ F+ATAN  DTIP PLLDRME I +PGYT  EK+ IA  +L+PKQ+  +GL    V VT
Sbjct:  184 VSLLQSLKLPAPVLTQLQKFL---DNVAVMPGQVVDLLMSTIESSLDEKIMILEAVDLKDRISKAIELLTRQIHVLKISQKVHDNVEGKLNKKQREFYLRQQMAAIKEELGEK-DAGEDDEMTQIESRLAAVNLPADVQKAADRELKRLKKMQPSSSEYSVIRNYLDWLADLPW-----------------AKSSEDILDVEKARKQLNDDHHGLEKVKRRILEYLAVTKLQQLKGDVRGPILCLVGPPGVGKTSLGRSIASAMGRKFHRISLGGVWDESEIRGHRRTYVGALPGLIIHGLKKCEVNNPVFLLDEIDKVGSRGHHGDPSAAFLEVLDPEQNSTFTDHYLNVPFDLSKILFIATANSLDTIPAPLLDRMETITIPGYTYAEKLAIATNHLLPKQIRLHGLGETDVQVT 579          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|1127357425|gb|APR78828.1| (ATP-dependent protease La [Minicystis rosea])

HSP 1 Score: 427.172 bits (1097), Expect = 6.292e-139
Identity = 211/387 (54.52%), Postives = 280/387 (72.35%), Query Frame = 0
Query:   63 SPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVTPR 449
            +P ALAD +  +L+ P+E K +L+E   ++ R+R  L L+  Q+EI+K+  +I++++++ +   QREY LRQQLK IKE+LGE+E   ++ D+  L +R+    LP E    A+K+L+RL+ MQ    E++VVRTYL+WILD+PW      N   D              ++  V   LD DH+GL KVK+RILEY+AVR L +  KGPILCL+GPPGVGKTSLGRSIA ALGR+F R+SLGGVHDEA IRGHRRTY+GALPG I+Q MKK+GT +P+F++DEVDK+G   R GDPSAA+LEVLDPEQN+TF DHYL +PYDLS V F+ATAN  D IP PL DRME++ +PGYT  EK+ IA Q+L+PKQL+ +GL+PE + VT +
Sbjct:  174 APGALADLVAANLDAPVEEKAQLIETIEVKDRIRKVLRLLTRQLEILKMRERINSQIKEEMGKNQREYVLRQQLKAIKEELGEDE--GDQSDLDGLEDRIAKANLPTEAETVAKKQLKRLRTMQVGSAEYTVVRTYLDWILDIPW-----TNSTADN------------LEIGQVRKVLDEDHYGLEKVKKRILEYLAVRKLKQDKKGPILCLIGPPGVGKTSLGRSIARALGRKFVRVSLGGVHDEAAIRGHRRTYVGALPGQIIQGMKKSGTINPVFMMDEVDKIGHDFR-GDPSAALLEVLDPEQNNTFADHYLEIPYDLSHVMFVATANVADPIPPPLRDRMEILEIPGYTRREKLAIARQHLLPKQLSEHGLTPEQLEVTDK 540          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|1001616612|gb|KXS20354.1| (ATP-dependent protease La [Gonapodya prolifera JEL478])

HSP 1 Score: 420.624 bits (1080), Expect = 1.940e-138
Identity = 202/381 (53.02%), Postives = 278/381 (72.97%), Query Frame = 0
Query:   64 PSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHV 444
            P  LAD + + +++ +E K  +L+    + R+   L+L+  Q++++K+S K+   VE +L  +QRE  LR+Q+  IK++LGE+++  ++D++ EL  R+K   LP E   AA++E++RLKRM PS  E+ VVR+YLEW+ DLPW                 + V E   D+ +   QL+ DH+GL K+K RILE++AVR L + ++GPILC VGPPGVGKTSLG+SIA AL R+F R+SLGGV DEAEIRGHRRTYIGA+PG ++Q M++ GT +P+FLLDE+DKLG   R GDPS+A+LEVLDPEQNSTF DHY+N+P+DLS+VFF+ATAN+  TIP PLLDRME+I LPGYT +EK+ IA +YL+PKQ+ A+GLS E V
Sbjct:    7 PPRLADMVASMIDLSIEEKLSVLDAVEPKDRIEKVLKLLARQIQVLKISRKLQTTVEGKLGEKQREAILREQMNAIKQELGEKDE--DQDEIEELVKRIKDSNLPEEADKAAQREIKRLKRMHPSMAEYQVVRSYLEWLADLPW-----------------NKVSEDRLDIDSARKQLNEDHYGLEKIKTRILEFLAVRKLKKDMRGPILCFVGPPGVGKTSLGKSIAAALNRKFYRISLGGVRDEAEIRGHRRTYIGAMPGMVIQGMRRCGTANPVFLLDEIDKLGRDFR-GDPSSALLEVLDPEQNSTFNDHYINVPFDLSKVFFIATANEESTIPGPLLDRMEIIRLPGYTFDEKLHIARKYLLPKQITAHGLSVEDV 367          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|1176151797|gb|OQX69336.1| (endopeptidase La [Sorangiineae bacterium NIC37A_2])

HSP 1 Score: 425.631 bits (1093), Expect = 2.168e-138
Identity = 209/385 (54.29%), Postives = 278/385 (72.21%), Query Frame = 0
Query:   63 SPSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHVIVT 447
            +P AL+D +  +L+ P+E K +L+E   ++ R+R  L L+  Q+EI+K+  +I++++++ +   QREY LRQQLK IKE+LGE+E   ++ D+  L  RL    LP E    A+K+L+RL+ MQ    E++VVRTYL+WILD+PW    ++N                  ++  V + LD DH+GL KVK+RI+EY+AVR L +  KGPILCL+GPPGVGKTSLGRSIA ALGR+F R+SLGGVHDEA IRGHRRTY+GALPG I+Q MKKAGT +P+F++DEVDK+G   R GDPSAA+LEVLDPEQN+TF DHYL +PYDLS V F+ATAN  D IP PL DRME++ +PGYT  EK+ IA Q+LIPKQL  +GL P+ + +T
Sbjct:  176 APGALSDLVAANLDAPVEEKAQLIETVDVKERIRKVLRLLTRQLEILKMRERINSQIKEEMGKNQREYVLRQQLKAIKEELGEDE--GDQSDLDGLEERLAKANLPAEADSVAKKQLKRLRSMQVGSAEYTVVRTYLDWILDIPWTESTEDN-----------------LEILEVRSVLDEDHYGLDKVKKRIVEYLAVRKLKKDKKGPILCLLGPPGVGKTSLGRSIARALGRKFVRVSLGGVHDEAAIRGHRRTYVGALPGQIIQGMKKAGTVNPVFMMDEVDKIGHDFR-GDPSAALLEVLDPEQNNTFADHYLEIPYDLSNVMFVATANVADPIPPPLRDRMEILEIPGYTRREKLAIARQHLIPKQLEEHGLKPDQLTIT 540          
BLAST of EWM27368.1 vs. NCBI_GenBank
Match: gi|1180084463|ref|WP_083604192.1| (endopeptidase La [Pajaroellobacter abortibovis])

HSP 1 Score: 425.631 bits (1093), Expect = 2.289e-138
Identity = 208/381 (54.59%), Postives = 274/381 (71.92%), Query Frame = 0
Query:   64 PSALADELVTHLNVPLEAKQRLLEEPRLEARLRGALELIREQVEIIKLSSKISNEVEDRLSTRQREYYLRQQLKTIKEQLGEEEDGSEEDDMTELANRLKAKPLPREVRVAAEKELRRLKRMQPSQPEHSVVRTYLEWILDLPWFLKDDENEAGDTDAQVPSNVEEAFFDVRAVEAQLDRDHHGLGKVKRRILEYIAVRSLTRSLKGPILCLVGPPGVGKTSLGRSIATALGRRFQRLSLGGVHDEAEIRGHRRTYIGALPGNILQCMKKAGTPDPLFLLDEVDKLGSSIRGGDPSAAMLEVLDPEQNSTFTDHYLNLPYDLSRVFFLATANQTDTIPEPLLDRMEVINLPGYTIEEKVFIAEQYLIPKQLAANGLSPEHV 444
            P ALAD +  +L+ P+E K  LLE   ++ R+R  L L+  Q+EI+K+  +I++++++ +   QREY LRQQLK IKE+LGE+E   ++ D+  L  R+    LP E    A+K+L+RL+ MQ    E++V+RTYL+WILDLPW ++  +N                  ++ AV   LD DH+GL KVK+RILEY+AVR L +  KGPILCL+GPPGVGKTSLGRSIA ALGR+F R+SLGGVHDEA IRGHRRTY+GALPG I+Q MKKA T +P+F+LDEVDK+G   R GDP+AA+LEVLDPEQN+ F DHYL +PYDLS V F+ATAN  D IP PL DRME++ +PGYT  EK+ IA+Q+LIPKQL  +G++ E +
Sbjct:  175 PGALADLVAANLDAPVEEKASLLETLDVKERMRKVLRLLTRQLEILKMRERINSQIKEEMGKNQREYVLRQQLKAIKEELGEDE--GDQGDLDGLEERIAKGHLPGEAEQVAKKQLKRLRNMQVGSAEYTVIRTYLDWILDLPWHIQTTDN-----------------LEIEAVRKVLDEDHYGLEKVKKRILEYLAVRKLKKDKKGPILCLIGPPGVGKTSLGRSIARALGRKFHRISLGGVHDEAAIRGHRRTYVGALPGQIIQGMKKASTINPIFMLDEVDKIGHDFR-GDPAAALLEVLDPEQNNVFADHYLEIPYDLSHVMFIATANVVDPIPAPLRDRMEILEIPGYTRREKLAIAQQHLIPKQLEEHGITQEQL 535          
The following BLAST results are available for this feature:
BLAST of EWM27368.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109590|gb|EWM27368.1|0.000e+0100.00atp-dependent protease la [Nannochloropsis gaditan... [more]
gi|299471164|emb|CBN79021.1|6.130e-16060.78ATP-dependent protease La [Ectocarpus siliculosus][more]
gi|1027002851|ref|XP_016606582.1|2.055e-14253.81ATP-dependent protease La [Spizellomyces punctatus... [more]
gi|672820972|gb|KFH65868.1|2.257e-14055.56ATP-dependent protease La [Mortierella verticillat... [more]
gi|575482646|ref|XP_006680617.1|7.885e-14052.60hypothetical protein BATDEDRAFT_12969 [Batrachochy... [more]
gi|1032645648|gb|OAQ26963.1|3.395e-13952.76ATP-dependent protease La [Mortierella elongata AG... [more]
gi|1127357425|gb|APR78828.1|6.292e-13954.52ATP-dependent protease La [Minicystis rosea][more]
gi|1001616612|gb|KXS20354.1|1.940e-13853.02ATP-dependent protease La [Gonapodya prolifera JEL... [more]
gi|1176151797|gb|OQX69336.1|2.168e-13854.29endopeptidase La [Sorangiineae bacterium NIC37A_2][more]
gi|1180084463|ref|WP_083604192.1|2.289e-13854.59endopeptidase La [Pajaroellobacter abortibovis][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3314rna3314Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications