EWM27370.1, cds3304 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|585109592|gb|EWM27370.1| (atp-dependent protease la [Nannochloropsis gaditana]) HSP 1 Score: 795.423 bits (2053), Expect = 0.000e+0 Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0
Query: 1 MQVASHSSPAVQVEGGREGEEEEGMQEGGGGGEMGEGEHGREEGLEEGVEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFEPPSLPTSLPSSLSMEGGRLTPSSLPSPAAMTGTMPVAARERDRNRAGDKEGNRAEEGDGLFPSQADLYHPFFSSGDPKEGAQSSYEEGTEAVQEEGREGGGVEGLDLSGPVLRSLL 406
MQVASHSSPAVQVEGGREGEEEEGMQEGGGGGEMGEGEHGREEGLEEGVEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFEPPSLPTSLPSSLSMEGGRLTPSSLPSPAAMTGTMPVAARERDRNRAGDKEGNRAEEGDGLFPSQADLYHPFFSSGDPKEGAQSSYEEGTEAVQEEGREGGGVEGLDLSGPVLRSLL
Sbjct: 1 MQVASHSSPAVQVEGGREGEEEEGMQEGGGGGEMGEGEHGREEGLEEGVEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFEPPSLPTSLPSSLSMEGGRLTPSSLPSPAAMTGTMPVAARERDRNRAGDKEGNRAEEGDGLFPSQADLYHPFFSSGDPKEGAQSSYEEGTEAVQEEGREGGGVEGLDLSGPVLRSLL 406
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|553182940|ref|XP_005853810.1| (atp-dependent protease la [Nannochloropsis gaditana CCMP526] >gi|422295249|gb|EKU22548.1| atp-dependent protease la [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.502 bits (872), Expect = 3.686e-114 Identity = 183/205 (89.27%), Postives = 183/205 (89.27%), Query Frame = 0
Query: 34 MGEGEHGREEGLEEGVEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIK 238
MGEGEHGREEGLEEGVEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGP DGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIK
Sbjct: 1 MGEGEHGREEGLEEGVEGVLTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGP----------------------DGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIK 183
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|1040212948|gb|OBS70791.1| (hypothetical protein A6R68_00664, partial [Neotoma lepida]) HSP 1 Score: 219.164 bits (557), Expect = 5.393e-66 Identity = 113/230 (49.13%), Postives = 155/230 (67.39%), Query Frame = 0
Query: 61 VVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
+++ L++ILGP YE E + R+S PGV GLAW GG+++F+E S + G G LT+TG+LG++MKESA +A+SWL+S + + + + G L TDIHLH PAGA+ KDGPSAGV + LASL +GR V+ +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++HV +P RN KDL+++PS+VRQDL+F A + +VL AF+
Sbjct: 3 ILIDFHALKDILGPPLYELEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDG-EGQLTLTGQLGDIMKESAHLAISWLRSN-----------------AKKYHLTNAYGS--FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKHVIIPQRNEKDLEEIPSNVRQDLSFITASCLDEVLNAAFD 212
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|472390790|ref|XP_004414699.1| (PREDICTED: lon protease homolog 2, peroxisomal, partial [Odobenus rosmarus divergens]) HSP 1 Score: 220.32 bits (560), Expect = 2.195e-65 Identity = 123/264 (46.59%), Postives = 165/264 (62.50%), Query Frame = 0
Query: 33 EMGEGEHGREEGLEEGV-EGV-----LTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
++ EGE RE LE+ E + L P +++ L++ILGP YE E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S T + L TDIHLH PAGA+ KDGPSAGV + LASL +GR V+ +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ V +P RN KDL+++P +VRQDL+F A ++ +VL AF+
Sbjct: 53 DVAEGEGCREHILEDAKPESIGDTPDLALPPEMPILIDFHALKDILGPPMYEMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNASGS-------------------FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVIIPQRNEKDLEEIPGNVRQDLSFVTASSLDEVLNAAFD 296
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|664778784|ref|XP_008508701.1| (PREDICTED: lon protease homolog 2, peroxisomal-like [Equus przewalskii]) HSP 1 Score: 216.853 bits (551), Expect = 3.795e-65 Identity = 114/230 (49.57%), Postives = 150/230 (65.22%), Query Frame = 0
Query: 61 VVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
+++ L++ILGP YE E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S T + L TDIHLH PAGA+ KDGPSAGV + LASL +GR V+ +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ V LP RN KDL+++P +VRQDL+F A + +VL AF+
Sbjct: 3 ILIDFHALKDILGPPMYEMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNASGS-------------------FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVILPQRNEKDLEEIPGNVRQDLSFVTASCLDEVLNAAFD 212
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|700356358|ref|XP_009922536.1| (PREDICTED: lon protease homolog 2, peroxisomal-like, partial [Haliaeetus albicilla]) HSP 1 Score: 216.468 bits (550), Expect = 1.016e-64 Identity = 119/255 (46.67%), Postives = 161/255 (63.14%), Query Frame = 0
Query: 38 EHGREEGLEEGVEGV--LTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
EH E+ E + L P +++ L++ILGP YE E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S + R ++ + G L TDIHLH PAGA+ KDGPSAGV + LASL +GR V +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ + +P RN KDL+++ +VRQDLTF +A + +VL AF+
Sbjct: 3 EHVTEDAKTESISDTADLALPPEMPILIDFHALKDILGPPMYEMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSN-----------------AKRYQLTNASGS--FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPRRNEKDLEEIAVNVRQDLTFVMASCLDEVLNAAFD 237
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|698405327|ref|XP_009809867.1| (PREDICTED: lon protease homolog 2, peroxisomal-like, partial [Gavia stellata]) HSP 1 Score: 219.55 bits (558), Expect = 1.066e-64 Identity = 127/283 (44.88%), Postives = 173/283 (61.13%), Query Frame = 0
Query: 10 AVQVEGGREGEEEEGMQEGGGGGEMGEGEHGREEGLEEGVEGV--LTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
AV+V G+ E + E G G + E H E+ E + L P +++ L++ILGP YE E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S + R ++ + G L TDIHLH PAGA+ KDGPSAGV + LASL +GR V +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ + +P RN KDL+++ +VRQDLTF +A + +VL AF+
Sbjct: 64 AVKVAEGQHKETKPDRAEVGEGEDCKE--HVTEDAKPESISDTADLALPPEMPILIDFHALKDILGPPMYEMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSN-----------------AKRYQLTNASGS--FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPRRNEKDLEEIAVNVRQDLTFVMASCLDEVLNAAFD 324
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|704264263|ref|XP_010152006.1| (PREDICTED: lon protease homolog 2, peroxisomal-like [Eurypyga helias]) HSP 1 Score: 219.164 bits (557), Expect = 1.679e-64 Identity = 125/264 (47.35%), Postives = 166/264 (62.88%), Query Frame = 0
Query: 33 EMGEGEHGREEGLEEGV-EGV-----LTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
E+GEGE RE E+ E + L P +++ L++ILGP YE E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S + R ++ + G L TDIHLH PAGA+ KDGPSAGV + LASL +GR V +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ V +P RN KDL+++ + VRQDLTF A + +VL AF+
Sbjct: 89 EVGEGEDCREHVTEDAKPESISDTADLALPPEMPILIDFHALKDILGPPMYEMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSN-----------------AKRYQLTNASGS--FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVIIPQRNEKDLEEIAAHVRQDLTFVRASCLDEVLNAAFD 332
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|701399934|ref|XP_009968654.1| (PREDICTED: lon protease homolog 2, peroxisomal-like, partial [Tyto alba]) HSP 1 Score: 216.083 bits (549), Expect = 1.856e-64 Identity = 119/255 (46.67%), Postives = 161/255 (63.14%), Query Frame = 0
Query: 38 EHGREEGLEEGVEGV--LTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
EH E+ E + L P +++ L++ILGP YE E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S + R ++ + G L TDIHLH PAGA+ KDGPSAGV + LASL +GR V +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ + +P RN KDL+++ +VRQDLTF +A + +VL AF+
Sbjct: 3 EHVTEDAKPESISDTADLALPPEMPILIDFHALKDILGPPMYEMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSN-----------------AKRYQLTNASGS--FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPRRNEKDLEEIAVNVRQDLTFVMASCLDEVLNAAFD 237
BLAST of EWM27370.1 vs. NCBI_GenBank
Match: gi|723578336|ref|XP_010309348.1| (PREDICTED: lon protease homolog 2, peroxisomal-like, partial [Balearica regulorum gibbericeps]) HSP 1 Score: 220.705 bits (561), Expect = 2.373e-64 Identity = 127/283 (44.88%), Postives = 174/283 (61.48%), Query Frame = 0
Query: 10 AVQVEGGREGEEEEGMQEGGGGGEMGEGEHGREEGLEEGVEGV--LTREPFEQVVVTEDVLEEILGPVRYESEGATRVSVPGVVTGLAWKTTGGELLFIECSLVQGGRGTLTITGKLGEVMKESAAIALSWLKSKLPSPPPTPPPSTSSRTPSPRSEIESWVGPVLLPLTPTTDIHLHVPAGAIPKDGPSAGVAMAVALASLVTGRKVKPTIAMTGEMTLRGLVLPVGGIKEKLLAAHRGGIRHVCLPLRNAKDLQDLPSSVRQDLTFTLAGNITDVLAVAFE 290
AV+V G+ E + E G G + E H E+ E + L P +++ L++ILGP YE+E + R+S PGV GLAW GGE++F+E S + G G LT+TG+LG+VMKESA +A+SWL+S + R ++ + G L TDIHLH PAGA+ KDGPSAGV + LASL +GR V +AMTGE+TLRGLVLPVGGIK+K+LAAHR G++ + +P RN KDL+++ +VRQDLTF +A + +VL AF+
Sbjct: 126 AVKVAEGQHKETKPDRAEVGEGEDCKE--HVTEDTKPESISDTADLALPPEMPILIDFHALKDILGPPMYETEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDG-EGQLTLTGQLGDVMKESAHLAISWLRSN-----------------AKRYQLTNASGS--FDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPRRNEKDLEEIAVNVRQDLTFVMASCLDEVLNAAFD 386 The following BLAST results are available for this feature:
BLAST of EWM27370.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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