EWM27400.1, cds3269 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|585109631|gb|EWM27400.1| (short chain dehydrogenase reductase [Nannochloropsis gaditana]) HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0 Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0
Query: 1 MDAPSLSTSSLSPSLSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRKEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
MDAPSLSTSSLSPSLSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRKEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL
Sbjct: 1 MDAPSLSTSSLSPSLSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRKEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1183490163|gb|ORZ13855.1| (hypothetical protein BCR41DRAFT_323634 [Lobosporangium transversale]) HSP 1 Score: 289.271 bits (739), Expect = 1.103e-94 Identity = 150/271 (55.35%), Postives = 193/271 (71.22%), Query Frame = 0
Query: 12 SPSLSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASR--KEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPR 280
S S+ + LF+V+DK VL+TGG GIG MIA GFV NGA+V+I++R K+ + A ++++ P + C + ADL + Q + RE K+HVLVNNAG NWA P+ESYP AFEKV+ LNL FSLT+ LPLL ATAT +PA VINIGS+DG R + + +AYS+SKAALHQ++KV+AG LG +HITVN +APGPF SKMM TL +++EI G LGRIG PED+A A++LASRAGAY TGA++ VDGG+LVKPR
Sbjct: 4 SSSMHIPSLFNVKDKVVLVTGGSRGIGLMIAHGFVANGAKVYISARTAKDCDKVAEDLMKLG---PGQ--CFSIPADLQSLQEVQHLVREISKREL--KVHVLVNNAGANWAAPIESYPDSAFEKVINLNLKRVFSLTQAMLPLLLATATETHPASVINIGSVDGVRNPIQETYAYSASKAALHQMTKVMAGHLGSKHITVNAIAPGPFESKMMAATLQNSKDEIVRGIPLGRIGQPEDLAATAIYLASRAGAYTTGAIIPVDGGLLVKPR 267
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1022804558|ref|XP_016212067.1| (hypothetical protein PV09_06354 [Verruconis gallopava] >gi|759225206|gb|KIW02198.1| hypothetical protein PV09_06354 [Verruconis gallopava]) HSP 1 Score: 273.092 bits (697), Expect = 1.677e-88 Identity = 144/279 (51.61%), Postives = 190/279 (68.10%), Query Frame = 0
Query: 15 LSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRK-EATQAAAEIVRASSRPPSRVF-----------CRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
+ ++ LF+V+DK VL+TGG GIGRMI++GFV NGA+V+I+SR +A Q A + + A+ P R F C+ L A+LSK RE+A LHVLVNN+G+NWAEP + YP A+++V+ LNL F++T+L PLLE G+PARVINIGSIDG RV ++ FAYS+SKA LH LS+VLA LG R+IT NT+A GPF SKMMK TL + +E I+ G L RIGSPED+AG LFL+SRAG+YV GA + +DGG ++ +L
Sbjct: 1 MDINTLFNVKDKVVLVTGGAKGIGRMISEGFVRNGAKVYISSRDAKACQQACDELNATG--PGRAFSIPANFYDEKDCKKLAAELSK-------------RESA--LHVLVNNSGSNWAEPYDVYPDSAWDRVLTLNLKRVFTITQLLTPLLEKGQKEGDPARVINIGSIDGLRVPRLETFAYSASKAGLHHLSRVLASHLGERNITSNTIACGPFRSKMMKATLEKFEESIKEGIPLHRIGSPEDVAGTCLFLSSRAGSYVNGATITLDGGSILSTKL 262
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1183487302|gb|ORZ11022.1| (hypothetical protein BCR41DRAFT_357371 [Lobosporangium transversale] >gi|1183487959|gb|ORZ11671.1| hypothetical protein BCR41DRAFT_356731 [Lobosporangium transversale]) HSP 1 Score: 269.626 bits (688), Expect = 4.235e-87 Identity = 141/269 (52.42%), Postives = 184/269 (68.40%), Query Frame = 0
Query: 14 SLSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRKE--ATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPR 280
S+ LFDV+DK VL+TGG GIG MIA GF+ NGA+V+I+SR + A E+ + P + C L ADL + E L++ +++ + K+HVLVNNAG W P+ESYP +AFEKV+ LNL FSLT+ LPLL+A AT PA +INIGS+DG V ++ +AYS+SKAALHQ+++VLAG LGHR+IT N +APGPF SKMM TL E I + +GRIG PED+A ++LASRAGAY TGA++ VDGG LVK +
Sbjct: 3 SMQSSSLFDVKDKVVLVTGGSRGIGLMIAHGFIVNGAKVYISSRSAGVCDKVADELTKLG---PGK--CISLPADL-QSMDEVKRLVAEISKRES-KVHVLVNNAGATWGAPIESYPDEAFEKVMNLNLKRVFSLTQAMLPLLDAAATEKTPASIINIGSVDGIHVPTLETYAYSASKAALHQMTRVLAGHLGHRYITCNAIAPGPFQSKMMAATLRDFGETIVSNIPMGRIGQPEDIAATCIYLASRAGAYTTGAIIPVDGGALVKAK 264
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1183517124|gb|ORZ40340.1| (hypothetical protein BCR44DRAFT_1172834 [Catenaria anguillulae PL171]) HSP 1 Score: 269.24 bits (687), Expect = 9.602e-87 Identity = 143/271 (52.77%), Postives = 184/271 (67.90%), Query Frame = 0
Query: 10 SLSPSLSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASR-KEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHR-HITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVK 278
++ P + + LFDV+DK VL+TGG GIG MIA GFV NGA+V+I +R K+ +AAA+ + A P C +T DL Q + RE G +HVLVNNAG NW P+E YP +AFEKV+ LN+ FSLT+ LPLL A T +PARVINIGS+DG R ++ +AYS+SKAALH ++KV+A +L R HITVN +APGPF SKMMK TL + + I G LGRIG P DMAG ++LAS+AGAYV+GAV+ VDGG +V+
Sbjct: 4 AIPPPMHISTLFDVKDKVVLVTGGSRGIGLMIASGFVANGAKVYITARSKQVNEAAAKALTAQG--PGE--CISITGDLQSMADVQKLVAEIRNREPQG-IHVLVNNAGANWGSPIEEYPDEAFEKVMNLNVRRVFSLTQACLPLLLAAGTKEDPARVINIGSVDGIRTPALETYAYSASKAALHHMTKVMAAQLPSRGHITVNAVAPGPFESKMMKATLDKFHDAIVNGIPLGRIGEPADMAGVCIYLASKAGAYVSGAVIPVDGGAVVR 269
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|915153400|ref|XP_013328219.1| (Gluconate 5-dehydrogenase [Rasamsonia emersonii CBS 393.64] >gi|802091890|gb|KKA21607.1| Gluconate 5-dehydrogenase [Rasamsonia emersonii CBS 393.64]) HSP 1 Score: 267.314 bits (682), Expect = 3.045e-86 Identity = 142/268 (52.99%), Postives = 183/268 (68.28%), Query Frame = 0
Query: 15 LSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRKE-ATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
+ + LF+V+ K VL+TGG GIGRMI++G+V NGA V+I+SR E A + A + A + + + A+ K E Q + RE+ KLHVLVNN+G+NW P + YP A+ +V+ LNL F LTRL PLLE A+ G+PAR+INIGSIDG RV ++ FAYS+SKA LH LS+VLA LG R+IT NTLA GPF SKMM TL + ++ IEAG LGRIG+PED+AGA LFL+SRAGAYV GA + VDGG +V +L
Sbjct: 1 MDIQNLFNVKGKVVLVTGGAKGIGRMISEGYVTNGATVYISSRDEKALEKAVNELNALGKGKAYA----IPANFYKEEDCQKLVEELKKRES--KLHVLVNNSGSNWGAPYDEYPSSAWTRVLTLNLHRVFDLTRLLTPLLEKGASPGDPARIINIGSIDGLRVPALETFAYSASKAGLHHLSRVLANHLGKRNITSNTLACGPFQSKMMAATLEKYRDVIEAGIPLGRIGTPEDVAGACLFLSSRAGAYVNGATITVDGGCVVASKL 262
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|996653064|gb|KXH68028.1| (short chain dehydrogenase/reductase family protein [Colletotrichum salicis]) HSP 1 Score: 266.159 bits (679), Expect = 1.010e-85 Identity = 134/267 (50.19%), Postives = 189/267 (70.79%), Query Frame = 0
Query: 15 LSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASRKEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
+ V LF+V+DKN+L+TGG GIG MI++G++ NGA V+I+SR +A +A +++ P + C + ADL K + + L+ +A++T+GKLHVLVNN+G W + E+YP A+ K++ LNL F+LT+LA PLLE+ A+ +P+R+INIGS+DG RV LI +AYS+SKA LH LS+ LA +LG R IT NTLA GPF SKMM TL ++ IE + RIG+P+D+AGA LFL+ RAGA+VTGA + VDGGI++ +L
Sbjct: 1 MDVTSLFNVKDKNILVTGGAKGIGYMISEGYITNGATVYISSR-DAKACSASAATLTAKGPGK--CHAIPADLQKLD-DCKRLVDELAKQTSGKLHVLVNNSGAAWGDAFETYPDAAWTKLLTLNLQRVFTLTQLAAPLLESGASPSDPSRIINIGSVDGLRVPLISSYAYSASKAGLHHLSRALARELGPRGITSNTLACGPFESKMMAATLETMRDTIEEEIPMRRIGTPQDVAGACLFLSGRAGAFVTGATITVDGGIVLASKL 263
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1066270827|ref|XP_018041900.1| (NAD(P)-binding protein [Paraphaeosphaeria sporulosa] >gi|1027151089|gb|OAG11535.1| NAD(P)-binding protein [Paraphaeosphaeria sporulosa]) HSP 1 Score: 265.388 bits (677), Expect = 1.820e-85 Identity = 141/264 (53.41%), Postives = 180/264 (68.18%), Query Frame = 0
Query: 20 LFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASR--KEATQAAAEIVRASSRPPSRVFCRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
LF V K VL+TGG GIGRMI++GFV NGA+V+I+SR K QA E+ + TADL K E + L+A ++ AGKL VLVNN+G+NW E ++YP A+++V+ LNL F LT+ PLLEA AT +P+RVINIGS+DG RV ++ FAYS+SKA LH LS+VLA LG R+IT NT+A GPF SKMMK TL + Q+ IEA LGRIGSPED+AG ++L+ RAGAYV GA + +DGG LV +L
Sbjct: 6 LFSVSGKVVLVTGGAKGIGRMISEGFVQNGAKVYISSRDAKACAQACDELNALGKGKADYI-----TADLYK--EEDITKLAAELKKRAGKLDVLVNNSGSNWGESYDTYPSAAWDRVLTLNLKRVFQLTQAVTPLLEAAATSASPSRVINIGSVDGLRVPALETFAYSASKAGLHHLSRVLASHLGKRNITSNTIACGPFQSKMMKATLEKFQDAIEATIPLGRIGSPEDVAGTCIWLSGRAGAYVNGATIALDGGSLVGSKL 262
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1069631311|ref|XP_018184559.1| (NAD(P)-binding protein [Xylona heveae TC161] >gi|1018266583|gb|KZF19004.1| NAD(P)-binding protein [Xylona heveae TC161]) HSP 1 Score: 265.388 bits (677), Expect = 2.075e-85 Identity = 141/279 (50.54%), Postives = 186/279 (66.67%), Query Frame = 0
Query: 15 LSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASR--KEATQAAAEIVR----ASSRPPSRVF----CRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLG--NPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
+ + LFDV+DK VL+TGG GIGRMI++GF+ NGA+V+I+SR K +A AE+ + + P+ + C+ L +L K ES KLH+LVNN+G+NW E SYP A+ +V+ LNL F++T+L PLLEA A+ +PAR+INIGS+DG RV ++ FAYS+SKA LH LS+VLA LG R+IT NT+A GPF SKMM TL R +E+IE LGRIG+PED+AG LFL+SRAGAYV GA + +DGG LV+ RL
Sbjct: 1 MDIPHLFDVKDKVVLVTGGAKGIGRMISEGFIRNGAKVYISSRDAKACAEAVAELNKIGPGKAEAIPANFYEEEECKRLAKELEKRES---------------KLHILVNNSGSNWGESYSSYPSSAWTRVLTLNLHRVFTITQLLTPLLEAAASENPLDPARIINIGSVDGLRVPALETFAYSASKAGLHHLSRVLANHLGTRNITSNTIACGPFESKMMAATLQRFREQIEGQIPLGRIGTPEDVAGTCLFLSSRAGAYVNGATIALDGGSLVRARL 264
BLAST of EWM27400.1 vs. NCBI_GenBank
Match: gi|1046779927|gb|OCK87726.1| (oxidoreductase [Cenococcum geophilum 1.58]) HSP 1 Score: 265.388 bits (677), Expect = 2.143e-85 Identity = 140/277 (50.54%), Postives = 183/277 (66.06%), Query Frame = 0
Query: 15 LSVDKLFDVRDKNVLITGGGTGIGRMIAQGFVDNGARVFIASR--KEATQAAAEIV---RASSRP-PSRVF----CRGLTADLSKGESEQMNLLSAVARETAGKLHVLVNNAGTNWAEPVESYPIKAFEKVVALNLLAAFSLTRLALPLLEATATLGNPARVINIGSIDGARVTLIDHFAYSSSKAALHQLSKVLAGKLGHRHITVNTLAPGPFASKMMKVTLARAQEEIEAGTALGRIGSPEDMAGAALFLASRAGAYVTGAVLVVDGGILVKPRL 281
+ V LFDV+DK VL+TGG GIGRMI++GFV NGA+V+I+SR K QA E+ + S+ P+ + C+ L +L K E KLH+LVNN+G+NW E ++YP A+ +V+ LNL F++T+L PLLE AT +PAR+INIGSIDG RV ++ FAYS+SKA LH LS+VLA LG RHIT NTLA GPF SKMM TL + ++ IE T LGRIG+P+D+AGA LFL SRAGA+V GA + +DGG + +L
Sbjct: 1 MDVSTLFDVKDKVVLVTGGAKGIGRMISEGFVQNGAKVYISSRDAKACEQACKELNALGKGSAYAIPANFYKEEDCKQLAQELGKREK---------------KLHILVNNSGSNWGESYDTYPDSAWTRVLTLNLHRVFTITQLLTPLLENAATAEDPARIINIGSIDGLRVPSLETFAYSASKAGLHHLSRVLANHLGRRHITSNTLACGPFESKMMAATLKKFRDVIEGQTTLGRIGTPQDVAGACLFLGSRAGAWVNGATIALDGGSAISAKL 262 The following BLAST results are available for this feature:
BLAST of EWM27400.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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