EWM27411.1, cds3266 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|585109644|gb|EWM27411.1| (protein serine threonine kinase [Nannochloropsis gaditana]) HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 1 MEAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRRTVNGASRPSSAASSSARTPSSRVL 259 MEAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRRTVNGASRPSSAASSSARTPSSRVL Sbjct: 1 MEAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRRTVNGASRPSSAASSSARTPSSRVL 259
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|553183793|ref|XP_005853969.1| (checkpoint serine/threonine-protein kinase [Nannochloropsis gaditana CCMP526] >gi|422295095|gb|EKU22394.1| checkpoint serine/threonine-protein kinase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 312.383 bits (799), Expect = 5.758e-106 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 Query: 85 MPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRR 235 MPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRR Sbjct: 1 MPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRR 151
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|325181188|emb|CCA15602.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325181883|emb|CCA16338.1| conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 179.489 bits (454), Expect = 1.162e-48 Identity = 87/208 (41.83%), Postives = 132/208 (63.46%), Query Frame = 0 Query: 5 EWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEG 212 EWE SKENV+PL+ GRNVS+LN LS++ + RA+L + Q +E +++ +G+DPL W+ YI W++ P+D+++ VLE+C R + +A Y +YL IWI YA+ +++P +IFK+L++ KIG ALF+ WA V E+ G+ + A K++ K I+ +A P +LL ++ FQRRMSRHWLR+NE G E Sbjct: 15 EWENSKENVIPLQRGRNVSELNQELSKQQRHHISNRAELFKQSQEWE--------LTIESYKGDDPLSLWMGYIRWIESKTPNDTRKKLTVLEQCTRSLKNDAQYHNSSKYLTIWIQYANLVTNPKDIFKYLYQNKIGQHVALFYIGWALVLERLGDHAQAHKIFLKAIQKNAKPSQLLEQKFQEFQRRMSRHWLRMNETGHTQESEA 214
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|953503361|emb|CEG36129.1| (bub protein kinase [Plasmopara halstedii]) HSP 1 Score: 176.792 bits (447), Expect = 2.493e-48 Identity = 88/203 (43.35%), Postives = 126/203 (62.07%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEE 204 E EWE SKENV+PLK GRNV+ LN +L + + R LE E +A E+ + + G+DPL W+ Y+ WL+ MP D+++ VLE+C R ++ YK D RY+++WI YAD +S+P +IFKFL++ KIG +LF+ WA+V E N+ A K+Y K + +A P +LL + + FQRRMSR WLR+ EE Sbjct: 31 EVFEWESSKENVLPLKRGRNVTDLNKSLRDHNSFQTKMR--LEYEVKAKEDAVVAYD--------GDDPLAAWIEYVRWLEVKMPEDTRKKFTVLEKCTRELKDNLRYKNDMRYIRLWIQYADLVSNPKDIFKFLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKASQKNAEPQDLLERKYNEFQRRMSRQWLRMTEE 223
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|301114499|ref|XP_002999019.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111113|gb|EEY69165.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 176.022 bits (445), Expect = 8.581e-47 Identity = 89/210 (42.38%), Postives = 127/210 (60.48%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211 +A EWE SKENVMPLK GRNV+ LN L R D + E+ L+ EE ++ +G+DPL W+ Y+ WL+ MP D+++ VLE+C R ++ YK D RY+++WI YAD +S+P +IFK+L++ KIG +LF+ WA+V E N+ A K+Y K + A P +LL + FQRRMSR WLR+ EE A+ + Sbjct: 13 DAFEWEASKENVMPLKRGRNVADLNKAL---------RAHDSFQTKLRLEDELKTKEEA-VEAYDGDDPLAAWLEYVRWLEVKMPEDTRKKFAVLEKCTRELKDNPRYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETIANYPQAHKIYLKAGQKSAEPQDLLERKYKEFQRRMSRQWLRMTEETGASEID 212
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|570954423|gb|ETP19680.1| (hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >gi|570989375|gb|ETP47617.1| hypothetical protein F442_06465 [Phytophthora parasitica P10297]) HSP 1 Score: 173.326 bits (438), Expect = 5.385e-46 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211 +A EWE SKENVMPLK GRNV+ LN L + R LE E +A ++ ++ G+DPL W+ YI WL+ MP D+++ LE+C R ++ YK D RY+++WI YAD +S+P +IFK+L++ KIG +LF+ WA+V E N+ A K+Y K + +A P +LL + FQRRMSR WLR+ EE A + Sbjct: 81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|570954419|gb|ETP19676.1| (hypothetical protein F441_06427 [Phytophthora parasitica CJ01A1] >gi|570954420|gb|ETP19677.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570954421|gb|ETP19678.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570954422|gb|ETP19679.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 173.326 bits (438), Expect = 5.436e-46 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211 +A EWE SKENVMPLK GRNV+ LN L + R LE E +A ++ ++ G+DPL W+ YI WL+ MP D+++ LE+C R ++ YK D RY+++WI YAD +S+P +IFK+L++ KIG +LF+ WA+V E N+ A K+Y K + +A P +LL + FQRRMSR WLR+ EE A + Sbjct: 81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|568022301|gb|ETL96378.1| (BUB protein kinase, variant 6 [Phytophthora parasitica]) HSP 1 Score: 173.326 bits (438), Expect = 1.371e-45 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211 +A EWE SKENVMPLK GRNV+ LN L + R LE E +A ++ ++ G+DPL W+ YI WL+ MP D+++ LE+C R ++ YK D RY+++WI YAD +S+P +IFK+L++ KIG +LF+ WA+V E N+ A K+Y K + +A P +LL + FQRRMSR WLR+ EE A + Sbjct: 81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|568022300|gb|ETL96377.1| (BUB protein kinase, variant 5 [Phytophthora parasitica]) HSP 1 Score: 172.94 bits (437), Expect = 1.549e-45 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211 +A EWE SKENVMPLK GRNV+ LN L + R LE E +A ++ ++ G+DPL W+ YI WL+ MP D+++ LE+C R ++ YK D RY+++WI YAD +S+P +IFK+L++ KIG +LF+ WA+V E N+ A K+Y K + +A P +LL + FQRRMSR WLR+ EE A + Sbjct: 81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|675166025|ref|XP_008891897.1| (BUB protein kinase [Phytophthora parasitica INRA-310] >gi|568108040|gb|ETN22664.1| BUB protein kinase [Phytophthora parasitica INRA-310]) HSP 1 Score: 172.94 bits (437), Expect = 2.386e-45 Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0 Query: 2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211 +A EWE SKENVMPLK GRNV+ LN L + R LE E +A ++ ++ G+DPL W+ YI WL+ MP D+++ LE+C R ++ YK D RY+++WI YAD +S+P +IFK+L++ KIG +LF+ WA+V E N+ A K+Y K + +A P +LL + FQRRMSR WLR+ EE A + Sbjct: 81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280 The following BLAST results are available for this feature:
BLAST of EWM27411.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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