EWM27411.1, cds3266 (CDS) Nannochloropsis gaditana

Overview
NameEWM27411.1
Unique Namecds3266
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1203956..1204050 +
Alignment locationCM002460.1:1204224..1204355 +
Alignment locationCM002460.1:1204505..1204570 +
Alignment locationCM002460.1:1204687..1204744 +
Alignment locationCM002460.1:1204841..1204891 +
Alignment locationCM002460.1:1204999..1205109 +
Alignment locationCM002460.1:1205176..1205222 +
Alignment locationCM002460.1:1205436..1205579 +
Alignment locationCM002460.1:1205777..1205826 +
Alignment locationCM002460.1:1205919..1205944 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27411.1
Productprotein serine threonine kinase
Orig transcript idgnl|cribi|Naga_100237g1.1703.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1203956..1204050 +
CM002460.1supercontigCM002460.1:1204224..1204355 +
CM002460.1supercontigCM002460.1:1204505..1204570 +
CM002460.1supercontigCM002460.1:1204687..1204744 +
CM002460.1supercontigCM002460.1:1204841..1204891 +
CM002460.1supercontigCM002460.1:1204999..1205109 +
CM002460.1supercontigCM002460.1:1205176..1205222 +
CM002460.1supercontigCM002460.1:1205436..1205579 +
CM002460.1supercontigCM002460.1:1205777..1205826 +
CM002460.1supercontigCM002460.1:1205919..1205944 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
GO:0007094mitotic spindle assembly checkpoint
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR015661Bub1/Mad3
IPR013212Mad3/Bub1_I
Homology
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|585109644|gb|EWM27411.1| (protein serine threonine kinase [Nannochloropsis gaditana])

HSP 1 Score: 528.094 bits (1359), Expect = 0.000e+0
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query:    1 MEAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRRTVNGASRPSSAASSSARTPSSRVL 259
            MEAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRRTVNGASRPSSAASSSARTPSSRVL
Sbjct:    1 MEAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRRTVNGASRPSSAASSSARTPSSRVL 259          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|553183793|ref|XP_005853969.1| (checkpoint serine/threonine-protein kinase [Nannochloropsis gaditana CCMP526] >gi|422295095|gb|EKU22394.1| checkpoint serine/threonine-protein kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 312.383 bits (799), Expect = 5.758e-106
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query:   85 MPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRR 235
            MPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRR
Sbjct:    1 MPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEGGDEGGPEGRGGRSALATKKEKRR 151          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|325181188|emb|CCA15602.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325181883|emb|CCA16338.1| conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 179.489 bits (454), Expect = 1.162e-48
Identity = 87/208 (41.83%), Postives = 132/208 (63.46%), Query Frame = 0
Query:    5 EWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFEG 212
            EWE SKENV+PL+ GRNVS+LN  LS++ +     RA+L  + Q +E          +++ +G+DPL  W+ YI W++   P+D+++   VLE+C R  + +A Y    +YL IWI YA+ +++P +IFK+L++ KIG   ALF+  WA V E+ G+ + A K++ K I+ +A P +LL ++   FQRRMSRHWLR+NE G     E 
Sbjct:   15 EWENSKENVIPLQRGRNVSELNQELSKQQRHHISNRAELFKQSQEWE--------LTIESYKGDDPLSLWMGYIRWIESKTPNDTRKKLTVLEQCTRSLKNDAQYHNSSKYLTIWIQYANLVTNPKDIFKYLYQNKIGQHVALFYIGWALVLERLGDHAQAHKIFLKAIQKNAKPSQLLEQKFQEFQRRMSRHWLRMNETGHTQESEA 214          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|953503361|emb|CEG36129.1| (bub protein kinase [Plasmopara halstedii])

HSP 1 Score: 176.792 bits (447), Expect = 2.493e-48
Identity = 88/203 (43.35%), Postives = 126/203 (62.07%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEE 204
            E  EWE SKENV+PLK GRNV+ LN +L +      + R  LE E +A E+ +   +        G+DPL  W+ Y+ WL+  MP D+++   VLE+C R  ++   YK D RY+++WI YAD +S+P +IFKFL++ KIG   +LF+  WA+V E   N+  A K+Y K  + +A P +LL  + + FQRRMSR WLR+ EE
Sbjct:   31 EVFEWESSKENVLPLKRGRNVTDLNKSLRDHNSFQTKMR--LEYEVKAKEDAVVAYD--------GDDPLAAWIEYVRWLEVKMPEDTRKKFTVLEKCTRELKDNLRYKNDMRYIRLWIQYADLVSNPKDIFKFLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKASQKNAEPQDLLERKYNEFQRRMSRQWLRMTEE 223          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|301114499|ref|XP_002999019.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111113|gb|EEY69165.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 176.022 bits (445), Expect = 8.581e-47
Identity = 89/210 (42.38%), Postives = 127/210 (60.48%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211
            +A EWE SKENVMPLK GRNV+ LN  L         R  D    +   E+ L+  EE  ++  +G+DPL  W+ Y+ WL+  MP D+++   VLE+C R  ++   YK D RY+++WI YAD +S+P +IFK+L++ KIG   +LF+  WA+V E   N+  A K+Y K  +  A P +LL  +   FQRRMSR WLR+ EE  A+  +
Sbjct:   13 DAFEWEASKENVMPLKRGRNVADLNKAL---------RAHDSFQTKLRLEDELKTKEEA-VEAYDGDDPLAAWLEYVRWLEVKMPEDTRKKFAVLEKCTRELKDNPRYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETIANYPQAHKIYLKAGQKSAEPQDLLERKYKEFQRRMSRQWLRMTEETGASEID 212          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|570954423|gb|ETP19680.1| (hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >gi|570989375|gb|ETP47617.1| hypothetical protein F442_06465 [Phytophthora parasitica P10297])

HSP 1 Score: 173.326 bits (438), Expect = 5.385e-46
Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211
            +A EWE SKENVMPLK GRNV+ LN  L        + R  LE E +A ++ ++           G+DPL  W+ YI WL+  MP D+++    LE+C R  ++   YK D RY+++WI YAD +S+P +IFK+L++ KIG   +LF+  WA+V E   N+  A K+Y K  + +A P +LL  +   FQRRMSR WLR+ EE  A   +
Sbjct:   81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|570954419|gb|ETP19676.1| (hypothetical protein F441_06427 [Phytophthora parasitica CJ01A1] >gi|570954420|gb|ETP19677.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570954421|gb|ETP19678.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570954422|gb|ETP19679.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 173.326 bits (438), Expect = 5.436e-46
Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211
            +A EWE SKENVMPLK GRNV+ LN  L        + R  LE E +A ++ ++           G+DPL  W+ YI WL+  MP D+++    LE+C R  ++   YK D RY+++WI YAD +S+P +IFK+L++ KIG   +LF+  WA+V E   N+  A K+Y K  + +A P +LL  +   FQRRMSR WLR+ EE  A   +
Sbjct:   81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|568022301|gb|ETL96378.1| (BUB protein kinase, variant 6 [Phytophthora parasitica])

HSP 1 Score: 173.326 bits (438), Expect = 1.371e-45
Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211
            +A EWE SKENVMPLK GRNV+ LN  L        + R  LE E +A ++ ++           G+DPL  W+ YI WL+  MP D+++    LE+C R  ++   YK D RY+++WI YAD +S+P +IFK+L++ KIG   +LF+  WA+V E   N+  A K+Y K  + +A P +LL  +   FQRRMSR WLR+ EE  A   +
Sbjct:   81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|568022300|gb|ETL96377.1| (BUB protein kinase, variant 5 [Phytophthora parasitica])

HSP 1 Score: 172.94 bits (437), Expect = 1.549e-45
Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211
            +A EWE SKENVMPLK GRNV+ LN  L        + R  LE E +A ++ ++           G+DPL  W+ YI WL+  MP D+++    LE+C R  ++   YK D RY+++WI YAD +S+P +IFK+L++ KIG   +LF+  WA+V E   N+  A K+Y K  + +A P +LL  +   FQRRMSR WLR+ EE  A   +
Sbjct:   81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280          
BLAST of EWM27411.1 vs. NCBI_GenBank
Match: gi|675166025|ref|XP_008891897.1| (BUB protein kinase [Phytophthora parasitica INRA-310] >gi|568108040|gb|ETN22664.1| BUB protein kinase [Phytophthora parasitica INRA-310])

HSP 1 Score: 172.94 bits (437), Expect = 2.386e-45
Identity = 88/210 (41.90%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    2 EAAEWEISKENVMPLKHGRNVSKLNATLSEKPKGMRERRADLETERQAFENRLQEVEERFLQNKEGEDPLREWVRYINWLQEAMPSDSQEATLVLERCARRFQEEALYKQDPRYLKIWISYADRLSSPGEIFKFLHKKKIGTTQALFWAAWAFVAEKSGNFSLADKLYTKGIELHALPIELLAERRHHFQRRMSRHWLRLNEEGRAAAFE 211
            +A EWE SKENVMPLK GRNV+ LN  L        + R  LE E +A ++ ++           G+DPL  W+ YI WL+  MP D+++    LE+C R  ++   YK D RY+++WI YAD +S+P +IFK+L++ KIG   +LF+  WA+V E   N+  A K+Y K  + +A P +LL  +   FQRRMSR WLR+ EE  A   +
Sbjct:   81 DAFEWEASKENVMPLKRGRNVADLNKALRAHDSFQTKLR--LEDELKAKQDAVEAYN--------GDDPLAAWLEYIRWLEVKMPEDTRKKFTALEKCTRELKDNPHYKNDMRYIRLWIQYADLVSNPKDIFKYLYQNKIGERVSLFYIGWAYVLETMANYPQAHKIYLKAGQKNAEPQDLLERKYKEFQRRMSRQWLRMTEETGANGID 280          
The following BLAST results are available for this feature:
BLAST of EWM27411.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109644|gb|EWM27411.1|0.000e+0100.00protein serine threonine kinase [Nannochloropsis g... [more]
gi|553183793|ref|XP_005853969.1|5.758e-106100.00checkpoint serine/threonine-protein kinase [Nannoc... [more]
gi|325181188|emb|CCA15602.1|1.162e-4841.83conserved hypothetical protein [Albugo laibachii N... [more]
gi|953503361|emb|CEG36129.1|2.493e-4843.35bub protein kinase [Plasmopara halstedii][more]
gi|301114499|ref|XP_002999019.1|8.581e-4742.38conserved hypothetical protein [Phytophthora infes... [more]
gi|570954423|gb|ETP19680.1|5.385e-4641.90hypothetical protein, variant 4 [Phytophthora para... [more]
gi|570954419|gb|ETP19676.1|5.436e-4641.90hypothetical protein F441_06427 [Phytophthora para... [more]
gi|568022301|gb|ETL96378.1|1.371e-4541.90BUB protein kinase, variant 6 [Phytophthora parasi... [more]
gi|568022300|gb|ETL96377.1|1.549e-4541.90BUB protein kinase, variant 5 [Phytophthora parasi... [more]
gi|675166025|ref|XP_008891897.1|2.386e-4541.90BUB protein kinase [Phytophthora parasitica INRA-3... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3275rna3275Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications