EWM27416.1, cds3258 (CDS) Nannochloropsis gaditana

Overview
NameEWM27416.1
Unique Namecds3258
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1170126..1170531 -
Alignment locationCM002460.1:1169463..1169864 -
Alignment locationCM002460.1:1168725..1168816 -
Alignment locationCM002460.1:1168116..1168501 -
Alignment locationCM002460.1:1167955..1168019 -
Alignment locationCM002460.1:1167565..1167692 -
Alignment locationCM002460.1:1167272..1167362 -
Alignment locationCM002460.1:1166919..1167149 -
Alignment locationCM002460.1:1166676..1166788 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27416.1
ProductDnaJ subfamily C, member 28
Orig transcript idgnl|cribi|Naga_100138g8.7677.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1170126..1170531 -
CM002460.1supercontigCM002460.1:1169463..1169864 -
CM002460.1supercontigCM002460.1:1168725..1168816 -
CM002460.1supercontigCM002460.1:1168116..1168501 -
CM002460.1supercontigCM002460.1:1167955..1168019 -
CM002460.1supercontigCM002460.1:1167565..1167692 -
CM002460.1supercontigCM002460.1:1167272..1167362 -
CM002460.1supercontigCM002460.1:1166919..1167149 -
CM002460.1supercontigCM002460.1:1166676..1166788 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018961DnaJ_homolog_subfam-C_membr-28
IPR018108Mitochondrial_sb/sol_carrier
Homology
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|585109651|gb|EWM27416.1| (DnaJ subfamily C, member 28 [Nannochloropsis gaditana])

HSP 1 Score: 1284.63 bits (3323), Expect = 0.000e+0
Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 0
Query:    1 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMEREATMASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERLYDFNKRMLLKTMRM 637
            MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMEREATMASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERLYDFNKRMLLKTMRM
Sbjct:    1 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMEREATMASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERLYDFNKRMLLKTMRM 637          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|553184029|ref|XP_005854013.1| (hypothetical protein NGA_0426510 [Nannochloropsis gaditana CCMP526] >gi|422295051|gb|EKU22350.1| hypothetical protein NGA_0426510 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 734.561 bits (1895), Expect = 0.000e+0
Identity = 403/444 (90.77%), Postives = 406/444 (91.44%), Query Frame = 0
Query:    1 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMER------------EATMASPEVLAEALSAAE---GGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGR 429
            MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMER            E   ++   L      AE    G          +VIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGR
Sbjct:    1 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPVWVERSSRIRDAERRLVHRLEAEWAKVVLETWEHGEGAEKRGKEGAMARWKSRVVGLAGLREDVAWINAEIDLYNLQVPSMSLQRMRMTLEEVCDVVQGGEKEGGTWMERGTARAVVRAAEKEGVFSTVTALGSLRLDAEEMKKGRGQRRRREEEDVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGR 444          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|553185835|ref|XP_005854317.1| (peroxisomal membrane protein pmp47b [Nannochloropsis gaditana CCMP526] >gi|422294741|gb|EKU22041.1| peroxisomal membrane protein pmp47b [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 577.785 bits (1488), Expect = 0.000e+0
Identity = 292/293 (99.66%), Postives = 292/293 (99.66%), Query Frame = 0
Query:  273 MASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKG 565
            MASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKE GPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKG
Sbjct:    1 MASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEDGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKG 293          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|553185847|ref|XP_005854321.1| (hypothetical protein NGA_0426520, partial [Nannochloropsis gaditana CCMP526] >gi|422294745|gb|EKU22045.1| hypothetical protein NGA_0426520, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 332.028 bits (850), Expect = 1.807e-106
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    1 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPV 160
            MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPV
Sbjct:  103 MEHTTFVSHLPKQLQQYEAEQVNNPLVRDQSRLIIRKDDPANRQWLSLPEFDGGDADGHSTASYFEREVAARKARLIRAERAVFRRRVRREEVAEGGTEGTPEEGMSVEEKIQLAMAQGDFDDLKGKGKPLERLEGYLYATDKTSATYMDVLSKSGVKPV 262          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|298709018|emb|CBJ30968.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 218.394 bits (555), Expect = 1.263e-61
Identity = 133/342 (38.89%), Postives = 199/342 (58.19%), Query Frame = 0
Query:  296 LYPLEVIKTVIQASKTKEQKQSRQATTTAATED----EQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGR--FGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSR-RRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGK--EATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERLYDFNK 628
            LYPLEVIKT +QA   +   +   + T  A ED     QT+S  GE   A                +    + D          +   VAK+IY R G+ G + GV Y+S QS +EK+ YFY Y  +K +  +  GGR      ++L +GYL+E  HLP T+PIEVV+T+I+TS+ +  +++   + +L E GP+G Y GI AY VLCLKPAIQY +F +L+   L+  S  R     + L+A QAF++GA+SRA+AT+I+FP+IR + ++M++  G     EG   G K    ++L +L   L+D+G   L++G+ PE+ RGVLSAALM+++KE+++   K
Sbjct:   21 LYPLEVIKTNLQAHTKQSTGRPSPSQTEEAEEDGGGDRQTTSPGGEGRRADGEEEEEEGLLLTRRSKQEERQLD-------CPPSVASVAKDIYSREGIAGLYRGVWYASTQSGVEKAAYFYGYGWLKALA-LRGGGRGELSTAKDLGLGYLAEAFHLPFTIPIEVVLTKIMTSKEKTNAFA-VIQGILSESGPAGFYTGIQAYAVLCLKPAIQYAVFNRLKAITLAYRSDGRSSAQPKELTAVQAFVIGAISRAVATVIVFPYIRAKVIIMSKKTG-----EGSGNGTKSPSTSILSSLITLLKDDGFSALFQGITPEIGRGVLSAALMMLVKEKIHSTVK 348          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|325179547|emb|CCA13945.1| (Mitochondrial Carrier (MC) Family putative [Albugo laibachii Nc14])

HSP 1 Score: 202.601 bits (514), Expect = 3.019e-56
Identity = 127/357 (35.57%), Postives = 193/357 (54.06%), Query Frame = 0
Query:  271 ATMASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREG----GKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERL 623
            A + S +VLA+A +A  GG +ST++LYPL+ +KT IQ SK K                                       A P+SG+    +G+  +  DS     Q V   +YR         G+QY + ++++ K +YFYAY+ +                +LL+GYLSE+ H P+T+P+EV+ TR+ TS     S ++   E+  E G SG YKG+ AY +L L+PAIQYTLF++++   LS   R       AL+A +AF+LGA++R++AT+I+FP+IR + +   Q       E    +G      E + L TL++  +++GV GLY+G+ PE+ RG +SAALMLMIKE+L
Sbjct:    2 APVDSSDVLAQACAAGLGGFLSTSILYPLDTLKTRIQ-SKNK---------------------------------------AFPISGDVEEGQGNALNKVDS-----QGVVMSLYR---------GIQYKAAEATVSKFLYFYAYTFLSQASSANGNSSVSTGMDLLLGYLSEISHRPLTIPMEVIATRLQTSNEGSSSVADMVSEIASESGISGFYKGLRAYLILGLQPAIQYTLFQRVKTFYLSRYKRN----TFALTAIEAFVLGAIARSIATIILFPYIRAKVLAQTQKNDSASVENALIDGQIRSKNEESTLNTLRQVYQEDGVVGLYQGLGPEIMRGAMSAALMLMIKEKL 300          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|1173958009|gb|OQS04436.1| (Mitochondrial Carrier (MC) Family [Thraustotheca clavata])

HSP 1 Score: 196.438 bits (498), Expect = 2.964e-54
Identity = 123/356 (34.55%), Postives = 189/356 (53.09%), Query Frame = 0
Query:  277 EVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKS---------WSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERL 623
            + LA A SAA GG  ++ +LYPL+ +KT       + Q QS+                                            +G+E       ++  +DVA       G+   + GV Y + QS+L K +YFYAY+ M  ++   N        NL+VGYL+E+ HLP+++P+EV++TR+ TS+ + K          W E       EG  SG YKG  AY VLCL+PAIQ+T FEQ++  I+ L S+      ++LSA +AF+LGA +R+LATL++FP+IR + ++ A+ K V   +    +     ++   L + +++EGV  LYRG++PELT+G LSAA MLM+KE++
Sbjct:    2 KTLATATSAALGGCAASVILYPLDTLKT-------RMQNQSK--------------------------------------------DGNE-------SVIPKDVA-------GVLSLYKGVGYKATQSTLSKFLYFYAYTNMTNMLLSKNAKSLSTFMNLIVGYLAELFHLPLSLPLEVIITRMQTSKNQTKQSFMQLLQTMWEE------NEGKLSGFYKGFSAYFVLCLQPAIQFTAFEQVK--IIYLKSK----AAKSLSALEAFILGAAARSLATLVVFPYIRAKVLVQAESKSVATAD----DSTPSESIPQILSRLVQEEGVGSLYRGLSPELTKGALSAAFMLMVKEKI 276          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|698778949|ref|XP_009822518.1| (hypothetical protein H257_01154 [Aphanomyces astaci] >gi|574122179|gb|ETV87655.1| hypothetical protein H257_01154 [Aphanomyces astaci])

HSP 1 Score: 195.667 bits (496), Expect = 8.941e-54
Identity = 109/289 (37.72%), Postives = 171/289 (59.17%), Query Frame = 0
Query:  340 VAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQ---GRLKSWSEAAKEVLKEGGP--SGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERL 623
            V    +++A    D L      E   + +D+ +    T DV   +         + GV+Y + QS++ K +YFYAY+ M  ++   N        NL+VGYL+E+ HLP+T+P+EVV+TR+ TS+   G+   +    + + +E G   +  YKG  AY VLCL+PAIQ+T+FEQ+++  L    +      ++LSA +AF+LGA +R+LATL++FP+IR + ++ A+ K   +  E      K  ++L  LQ  +RDEG P LYRG+APELT+G LS+A MLM+KE++
Sbjct:   18 VGGCTSSLALYPLDTLKTRMQSESKKDANDKKTPV--TWDVGTIL-------SLYKGVEYKAAQSTISKFLYFYAYTAMSNMLLAKNSTSLSTGANLVVGYLAEMFHLPITLPLEVVITRMQTSKGNDGKHTGFVHLLQSIWEENGGKWTAFYKGFSAYFVLCLQPAIQFTVFEQVKKVYL----KAYKPTTKSLSAIEAFVLGAAARSLATLVVFPYIRAKVIVQAKAKA--DSHE------KPKSMLEILQNLVRDEGYPSLYRGLAPELTKGALSSAFMLMVKEKI 285          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|635371867|emb|CCI40132.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 195.282 bits (495), Expect = 1.461e-53
Identity = 123/357 (34.45%), Postives = 190/357 (53.22%), Query Frame = 0
Query:  271 ATMASPEVLAEALSAAEGGAISTAVLYPLEVIKTVIQASKTKEQKQSRQATTTAATEDEQTSSAEGERNVAAAAAAVAASAADPLSGETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGRFGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSGLYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGK--GVREGE--EGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERL 623
            A + S +VLA+A +A  GG +ST +LYPL+ +KT IQ+                             +N A A                  EE +EG  +  S + ++     +YR         G+QY + ++++ K +YFYAY+ +                +L +GYLSE+ H P+T+P+EV+ TR+ TS     S ++   ++  E G SG YKG+ AY +L L+PAIQYTLF++++   LS   R     + AL+A +AF LGA++R++AT+I+FP+IR + +   Q    G  E E  +      KE + L TL++  +++GV GLYRG+ PE+ RG +SAAL LMIKE+L
Sbjct:    2 APVDSSDVLAQACAAGLGGFLSTTILYPLDTLKTRIQS-----------------------------KNKAFANH----------------EEVEEGQSKAVSKIDSEGAIMSLYR---------GIQYKAAEATVSKFLYFYAYTFLSQASSANGTNSMSTGMDLFLGYLSEISHRPLTIPMEVIATRLQTSSENSPSVADIVSQIASESGVSGFYKGLRAYLILGLQPAIQYTLFQRVKVFYLSRYKRN----MFALTALEAFFLGAIARSIATIILFPYIRAKVLAQTQKNDPGSVENELYDSQIRSNKEESTLDTLRQVYQEDGVVGLYRGLGPEIMRGAMSAALTLMIKEKL 300          
BLAST of EWM27416.1 vs. NCBI_GenBank
Match: gi|1210532168|dbj|GAX09234.1| (hypothetical protein FisN_17Lh300 [Fistulifera solaris])

HSP 1 Score: 194.512 bits (493), Expect = 2.462e-53
Identity = 110/270 (40.74%), Postives = 163/270 (60.37%), Query Frame = 0
Query:  358 ETAPEEGDEGSDEDSSALTTQDVAKEIYRRAGLGGFFGGVQYSSLQSSLEKSIYFYAYSTMKGVVKVLNGGR-FGVRENLLVGYLSEVVHLPVTVPIEVVVTRIITSQGRLKSWSEAAKEVLKEGGPSG---LYKGIPAYGVLCLKPAIQYTLFEQLRRGILSLLSRRRGVPVRALSAWQAFLLGALSRALATLIIFPWIRVRKMLMAQGKGVREGEEGGREGGKEATVLFTLQKTLRDEGVPGLYRGMAPELTRGVLSAALMLMIKERL 623
            +T  E+ DE  D   + +     A+ +Y+  G+  FF GVQ+S++QSS+EK++YF++Y+ +K V    +GG       NL++GY +E  HLP+T+PI+ + T I TS     S  + A +VL     S     Y  I AY +LCLKPA+QYT++EQ++   L   SRR      AL+A +AF LG ++R +AT+++FP++R + +L  QG      +    EGG   T    L +     G+ GLY+G++PELTRGVLSAALMLMIKER+
Sbjct:   41 DTCAEDKDERDDNTGNGMIA--TAQALYKEGGVARFFRGVQFSAVQSSIEKALYFFSYTCLKQVHSTFSGGAAMNTLTNLILGYAAEWSHLPITLPIDSITTAIQTS-----SKGDGAFQVLMTMLSSKNQKYYNAISAYYLLCLKPALQYTIYEQVKTVWLRSKSRR------ALTAVEAFALGMVARTVATILVFPFLRAKVLLQTQG----SQQNNTIEGGVSKTTTMVLNEQWNRAGLAGLYQGLSPELTRGVLSAALMLMIKERI 293          
The following BLAST results are available for this feature:
BLAST of EWM27416.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109651|gb|EWM27416.1|0.000e+0100.00DnaJ subfamily C, member 28 [Nannochloropsis gadit... [more]
gi|553184029|ref|XP_005854013.1|0.000e+090.77hypothetical protein NGA_0426510 [Nannochloropsis ... [more]
gi|553185835|ref|XP_005854317.1|0.000e+099.66peroxisomal membrane protein pmp47b [Nannochlorops... [more]
gi|553185847|ref|XP_005854321.1|1.807e-106100.00hypothetical protein NGA_0426520, partial [Nannoch... [more]
gi|298709018|emb|CBJ30968.1|1.263e-6138.89expressed unknown protein [Ectocarpus siliculosus][more]
gi|325179547|emb|CCA13945.1|3.019e-5635.57Mitochondrial Carrier (MC) Family putative [Albugo... [more]
gi|1173958009|gb|OQS04436.1|2.964e-5434.55Mitochondrial Carrier (MC) Family [Thraustotheca c... [more]
gi|698778949|ref|XP_009822518.1|8.941e-5437.72hypothetical protein H257_01154 [Aphanomyces astac... [more]
gi|635371867|emb|CCI40132.1|1.461e-5334.45unnamed protein product [Albugo candida][more]
gi|1210532168|dbj|GAX09234.1|2.462e-5340.74hypothetical protein FisN_17Lh300 [Fistulifera sol... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3267rna3267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications