EWM27455.1, cds3228 (CDS) Nannochloropsis gaditana

Overview
NameEWM27455.1
Unique Namecds3228
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:1082375..1082576 +
Alignment locationCM002460.1:1082647..1086218 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27455.1
ProductHistone deacetylase domain protein
Orig transcript idgnl|cribi|Naga_100107g15.4509.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:1082375..1082576 +
CM002460.1supercontigCM002460.1:1082647..1086218 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
Homology
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|585109710|gb|EWM27455.1| (Histone deacetylase domain protein [Nannochloropsis gaditana])

HSP 1 Score: 2601.24 bits (6741), Expect = 0.000e+0
Identity = 1257/1257 (100.00%), Postives = 1257/1257 (100.00%), Query Frame = 0
Query:    1 MIMVYRSGIFYTPEGERKRVLALPIEEGREYFKSKEDYLTFVTKRMIAYFDAKEKRPGRSSQSCMTPVPDRASDCVVMGPAPLEKAKFKTFWPARVATEQEALEFRKMHGLWGRKEEQMVVLVFLCVGGHHVLTSVKQDACRRVTLEELDYMVDLWFNGGEKLQAGVTLGQPLRTTQLGLEFVAGLLYAQAFARLGREDVSVERPVRNEARVTAFTARQLNNPWEACFVEDAAHEKVYAQDFPGLRDCDQCFASQQDCTAPEILGMALHYLKHRVEYALPHPLPVQHGAMRAEEGPCVGKRKFQEHPASLDTDRIADMENAYMSSQAAETKYRDVSTASDSIFLPSAAASLDQACQKMGTFSCSLLSSSAQTPSTHGTKARKGKERRTHRSVAARPPPSPLLSPPRSIPLPCVEEPPNLDAAVSSFRCAWSTLRSQASSLATNAPACWTEEPVSVKAVESVVLPQLLARCEAKELDVDRDLTFAHQVVRHAVEEIRGLGLKVRRAKRNEMDKIKADFRRALVDIGTEAYAGLVAFEQGAAARDVMILVLEQKEEDAAQVHRKFFKDNQTNDGEGPTIGVEKGCVHGETKDHAKHHTANLKADLMQMKELLSNLVSSTGKLVMRQTVASYELKLREALTLDERTSHDLQPLLGNQDARATPETIEASNGSLEEKEWLAERLTPLVERLENVESLALAHDAQLDDAVRLCIVQWGALRCQLLRHGVLGRGGKKKTLLLYDIRCANHKVPEAHVEQPQRFLHAAAAMRQLMQSNPEAFALQTEITADYFPLWRGPQEGYRDEILRVHTAAHLDGIRIRCEAAGSDITRLSAPPRVAAATVRVQAWLNKHKNGSVGPNADASSSSRPLLRSTATDSSSSAPLLGVGLGESAPGHLYHHPFLITQSPRKAASGGEKEKEEVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASRARWPRVVNLPLSPPLTPHKYRKVWCKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGYCCRPPNTRSARAASSAGTSRYFQDHEEAVDGGEYDAIDPATVESETVRDCVAATCRALAGIACRDEHRVEEATIRPKDKKQIDMGVAVGLYGIPSASSFSV 1257
            MIMVYRSGIFYTPEGERKRVLALPIEEGREYFKSKEDYLTFVTKRMIAYFDAKEKRPGRSSQSCMTPVPDRASDCVVMGPAPLEKAKFKTFWPARVATEQEALEFRKMHGLWGRKEEQMVVLVFLCVGGHHVLTSVKQDACRRVTLEELDYMVDLWFNGGEKLQAGVTLGQPLRTTQLGLEFVAGLLYAQAFARLGREDVSVERPVRNEARVTAFTARQLNNPWEACFVEDAAHEKVYAQDFPGLRDCDQCFASQQDCTAPEILGMALHYLKHRVEYALPHPLPVQHGAMRAEEGPCVGKRKFQEHPASLDTDRIADMENAYMSSQAAETKYRDVSTASDSIFLPSAAASLDQACQKMGTFSCSLLSSSAQTPSTHGTKARKGKERRTHRSVAARPPPSPLLSPPRSIPLPCVEEPPNLDAAVSSFRCAWSTLRSQASSLATNAPACWTEEPVSVKAVESVVLPQLLARCEAKELDVDRDLTFAHQVVRHAVEEIRGLGLKVRRAKRNEMDKIKADFRRALVDIGTEAYAGLVAFEQGAAARDVMILVLEQKEEDAAQVHRKFFKDNQTNDGEGPTIGVEKGCVHGETKDHAKHHTANLKADLMQMKELLSNLVSSTGKLVMRQTVASYELKLREALTLDERTSHDLQPLLGNQDARATPETIEASNGSLEEKEWLAERLTPLVERLENVESLALAHDAQLDDAVRLCIVQWGALRCQLLRHGVLGRGGKKKTLLLYDIRCANHKVPEAHVEQPQRFLHAAAAMRQLMQSNPEAFALQTEITADYFPLWRGPQEGYRDEILRVHTAAHLDGIRIRCEAAGSDITRLSAPPRVAAATVRVQAWLNKHKNGSVGPNADASSSSRPLLRSTATDSSSSAPLLGVGLGESAPGHLYHHPFLITQSPRKAASGGEKEKEEVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASRARWPRVVNLPLSPPLTPHKYRKVWCKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGYCCRPPNTRSARAASSAGTSRYFQDHEEAVDGGEYDAIDPATVESETVRDCVAATCRALAGIACRDEHRVEEATIRPKDKKQIDMGVAVGLYGIPSASSFSV
Sbjct:    1 MIMVYRSGIFYTPEGERKRVLALPIEEGREYFKSKEDYLTFVTKRMIAYFDAKEKRPGRSSQSCMTPVPDRASDCVVMGPAPLEKAKFKTFWPARVATEQEALEFRKMHGLWGRKEEQMVVLVFLCVGGHHVLTSVKQDACRRVTLEELDYMVDLWFNGGEKLQAGVTLGQPLRTTQLGLEFVAGLLYAQAFARLGREDVSVERPVRNEARVTAFTARQLNNPWEACFVEDAAHEKVYAQDFPGLRDCDQCFASQQDCTAPEILGMALHYLKHRVEYALPHPLPVQHGAMRAEEGPCVGKRKFQEHPASLDTDRIADMENAYMSSQAAETKYRDVSTASDSIFLPSAAASLDQACQKMGTFSCSLLSSSAQTPSTHGTKARKGKERRTHRSVAARPPPSPLLSPPRSIPLPCVEEPPNLDAAVSSFRCAWSTLRSQASSLATNAPACWTEEPVSVKAVESVVLPQLLARCEAKELDVDRDLTFAHQVVRHAVEEIRGLGLKVRRAKRNEMDKIKADFRRALVDIGTEAYAGLVAFEQGAAARDVMILVLEQKEEDAAQVHRKFFKDNQTNDGEGPTIGVEKGCVHGETKDHAKHHTANLKADLMQMKELLSNLVSSTGKLVMRQTVASYELKLREALTLDERTSHDLQPLLGNQDARATPETIEASNGSLEEKEWLAERLTPLVERLENVESLALAHDAQLDDAVRLCIVQWGALRCQLLRHGVLGRGGKKKTLLLYDIRCANHKVPEAHVEQPQRFLHAAAAMRQLMQSNPEAFALQTEITADYFPLWRGPQEGYRDEILRVHTAAHLDGIRIRCEAAGSDITRLSAPPRVAAATVRVQAWLNKHKNGSVGPNADASSSSRPLLRSTATDSSSSAPLLGVGLGESAPGHLYHHPFLITQSPRKAASGGEKEKEEVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASRARWPRVVNLPLSPPLTPHKYRKVWCKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGYCCRPPNTRSARAASSAGTSRYFQDHEEAVDGGEYDAIDPATVESETVRDCVAATCRALAGIACRDEHRVEEATIRPKDKKQIDMGVAVGLYGIPSASSFSV 1257          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|1055070872|ref|WP_066820381.1| (acetoin utilization protein [Mycobacterium sp. 1100029.7] >gi|1037462291|gb|OBA60225.1| acetoin utilization protein [Mycobacterium sp. 1100029.7])

HSP 1 Score: 165.236 bits (417), Expect = 1.743e-41
Identity = 95/240 (39.58%), Postives = 134/240 (55.83%), Query Frame = 0
Query:  918 GDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASRARWPRVVNLPLSPPLTPHKYRKVWC-KVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            GDT     ++     G  GTLQA+D V+ GRA NAFVACRPPGHH              E+A     GFC  N ++  A +A   +G+SRV++VD D+HHGNGT++I   + +T   + S H   +FP TG  +      + N PL P    ++ R+ +  ++  AVDAF PELIL+SAG DAH  DP+GS               R+++DD+  +   +++ A +H  GRLVAV+EGGY
Sbjct:   82 GDTMMEPSTWQVVLRGVGGTLQAIDGVLTGRAQNAFVACRPPGHH-----------AETERAM----GFCLFNNISIGARYAQNTYGVSRVAIVDFDVHHGNGTQQI--FYADTDVLYASTHQMPLFPGTGAITETGAGNIFNSPLRPGDAGNELREAFTQRILPAVDAFAPELILVSAGFDAHERDPLGSL--------------RMTADDFGWVTRELMSCAEKHCDGRLVAVLEGGY 290          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|960368639|ref|WP_058261493.1| (acetoin utilization protein [Thalassobius gelatinovorus] >gi|950311644|emb|CUH63501.1| Histone deacetylase-like amidohydrolase [Thalassobius gelatinovorus] >gi|1094554530|emb|SEQ68164.1| Acetoin utilization deacetylase AcuC [Thalassobius gelatinovorus])

HSP 1 Score: 164.851 bits (416), Expect = 2.460e-41
Identity = 101/256 (39.45%), Postives = 140/256 (54.69%), Query Frame = 0
Query:  903 RKAASGGEKEKEEVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTG-EASRARWPRVVNLPLSPPLTPHKYRKVWCK-VDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            R AA+  ++    +D DTF +  S  AA     GT  A+DAV+ G   NAFVACRPPGHH  R   P+              GFC    VA AA HA+   G++RV +VD D+HHGNGT+E+L    +    F S H + ++P TG E+ R ++ ++VNLPL+P     + R ++ + V   ++AF PELIL+SAG DAH  DP+   E+                DDY  I   + +LA RH  GR+V+ +EGGY
Sbjct:   64 RIAAAEPQQGCIALDEDTFMSPGSLQAARRAVGGTCAAIDAVMTGEVANAFVACRPPGHHAERE-TPM--------------GFCLFGTVAIAAKHAIMAHGVTRVVIVDFDVHHGNGTQELLW--TDDKVLFFSSHQSPLWPGTGTESERGKYDQIVNLPLAPQTGGLEMRNMYVRQVFPMIEAFKPELILISAGFDAHSADPLAQLEW--------------EVDDYTWITEHLCDLALRHCAGRVVSTLEGGY 288          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|1189777027|ref|WP_085817810.1| (acetoin utilization protein [Roseovarius halotolerans] >gi|1187986733|emb|SLN34360.1| Histone deacetylase-like amidohydrolase [Roseovarius halotolerans])

HSP 1 Score: 161.77 bits (408), Expect = 2.726e-40
Identity = 102/244 (41.80%), Postives = 135/244 (55.33%), Query Frame = 0
Query:  915 EVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEAS-RARWPRVVNLPLSPPLTPHKYRKVWCK-VDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            ++D DT+ +  S  AA  G  G L AVD V+ G+A NAFVA RPPGHH              EK      GFC    VA AA HA+ER GLSRV+VVD D+HHGNGT+++L     +   FIS H   ++P TG  S       V+NLPL P      +R  + + V  A+DAF PEL+L+SAG DAH +DP+                 RL+ DD+  +  R+ +LA+ H  GR+V+ +EGGY
Sbjct:   75 QIDPDTWMSPGSVDAALRGVGGALAAVDMVLAGKAANAFVATRPPGHHA-----------ETEKTM----GFCLFGTVAIAARHAMERHGLSRVAVVDFDVHHGNGTQDLLWSEARS--LFISSHQYPLWPGTGPVSDTGAHGNVINLPLDPGTNGEAFRAAYEETVFPALDAFAPELLLISAGFDAHHDDPLAGL--------------RLTEDDFAWVTGRLCDLADTHCSGRVVSCLEGGY 287          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|907601485|ref|WP_049744206.1| (acetoin utilization protein [Mycobacterium goodii] >gi|906352156|gb|AKS31791.1| acetoin utilization protein [Mycobacterium goodii])

HSP 1 Score: 159.844 bits (403), Expect = 1.270e-39
Identity = 95/240 (39.58%), Postives = 131/240 (54.58%), Query Frame = 0
Query:  918 GDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASRARWPRVVNLPLSPPLTPHKYRKVW-CKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            GDT     ++     G  GTLQAVD+V+ G A NAFVACRPPGHH              E+A     GFC  N ++  A HA  + GLSRV++VD D+HHGNGT+EI   + + +  + S H   +FP TG         + N PL P     + R+ +  ++ EAVD F PELI++SAG DAH  DP+GS               R+++DD+     +++  + RH  GRLV+V+EGGY
Sbjct:   82 GDTMMEPSTWEVVLRGVGGTLQAVDSVLDGTAQNAFVACRPPGHH-----------AETERAM----GFCLFNNISIGARHAQLKHGLSRVAIVDFDVHHGNGTQEI--FYSDASVLYASTHQMPLFPGTGAVDETGVGNIFNTPLRPGDGGDQLREAFRDRIIEAVDRFEPELIIVSAGFDAHERDPLGSL--------------RMTADDFAWATRQLMAASERHCDGRLVSVLEGGY 290          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|1121424089|ref|WP_073676718.1| (acetoin utilization protein [Mycobacterium sp. SWH-M5] >gi|1115599674|gb|OKH73660.1| acetoin utilization protein [Mycobacterium sp. SWH-M5])

HSP 1 Score: 159.073 bits (401), Expect = 2.578e-39
Identity = 95/240 (39.58%), Postives = 131/240 (54.58%), Query Frame = 0
Query:  918 GDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASRARWPRVVNLPLSPPLTPHKYRKVWC-KVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            GDT  +  ++     G  GTLQAVD+V+ G A NAFVACRPPGHH              ++A     GFC  N ++  A HA  + GLSRV++VD D+HHGNGT+EI   + + +  + S H    FP TGE S      + N PL+      + R+ +  ++  AVD F PELI++SAG DAH  DP+GS               R+++DD+      ++  A RH  GRLV+V+EGGY
Sbjct:   82 GDTMMDPSTWEVVLRGVGGTLQAVDSVLDGTAQNAFVACRPPGHH-----------AETQRAM----GFCLFNNISIGARHAQLKHGLSRVAIVDFDVHHGNGTQEI--FYSDASVLYASTHQMPFFPGTGEVSETGVGNIFNSPLAAGDGGDELREAFLDRILPAVDRFAPELIIVSAGFDAHERDPLGSL--------------RMTADDFAWATRELMAAAERHCDGRLVSVLEGGY 290          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|1100974399|ref|WP_071481575.1| (acetoin utilization protein [Rhodobaca barguzinensis])

HSP 1 Score: 158.688 bits (400), Expect = 3.352e-39
Identity = 98/244 (40.16%), Postives = 135/244 (55.33%), Query Frame = 0
Query:  915 EVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEA-SRARWPRVVNLPLSPPLTPHKYRKVW-CKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            ++D DT  +  S  AA  G  G  QAV+ V++G A NAFV  RPPGHH  R   P+              GFC    VA AA HA+ER GL RV+VVD D+HHGNGT+++L      AF F+S H   ++P TG+A  R  +  V+N+PL P      +R+++   V   +D F PEL+L+SAG DAH +DP+   E +               DD+  +   + ++A RH  GRLV+V+EGGY
Sbjct:   78 QLDADTHVSPGSMNAALRGVGGACQAVNLVMEGTAQNAFVGLRPPGHHAER-ATPM--------------GFCLFGTVAIAACHAMERHGLQRVAVVDFDVHHGNGTQDLL-WDEQRAF-FVSSHQMPLWPGTGKAEERGAFSNVMNIPLPPGTDGASFRRIYEDMVLPQLDRFAPELVLVSAGFDAHRDDPLAQLELL--------------EDDFAWVTGALCDIAARHCAGRLVSVLEGGY 290          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|1189761827|ref|WP_085806334.1| (acetoin utilization protein [Roseovarius albus] >gi|1188017548|emb|SLN53156.1| Histone deacetylase-like amidohydrolase [Roseovarius albus])

HSP 1 Score: 158.303 bits (399), Expect = 4.130e-39
Identity = 98/243 (40.33%), Postives = 132/243 (54.32%), Query Frame = 0
Query:  916 VDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEASR-ARWPRVVNLPLSPPLTPHKYRKVWCK-VDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            +DGDT+ + ES  AA     G ++AVD V+ G   NAFVACRPPGHH                  ++  GFC    VA AA HA+ER GLSRV+VVD D+HHGNGT+++L         F S H   +FP TG A    +   V+N+PL   +   ++R+VW + +  AV AF PE IL+SAG DAH  DP+ S               RL+  D+  + S + +LA     GR+V+ +EGGY
Sbjct:   76 IDGDTWMSPESLNAALRAAGGAVKAVDMVMAGDVLNAFVACRPPGHHA---------------EYEIPMGFCLFGTVAIAAKHALERHGLSRVAVVDFDVHHGNGTQDLLQ--DEARVFFASSHQMPLFPGTGGAHETGKHGNVLNVPLRDGMGSTEFRQVWGQEILPAVAAFEPEFILVSAGFDAHAADPLASL--------------RLTEADFAWVTSAICDLAGESCQGRVVSSLEGGY 287          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|1097467814|emb|SFJ79193.1| (Acetoin utilization deacetylase AcuC [Jannaschia pohangensis])

HSP 1 Score: 158.303 bits (399), Expect = 5.028e-39
Identity = 101/252 (40.08%), Postives = 136/252 (53.97%), Query Frame = 0
Query:  910 EKEKEE----VDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEAS-RARWPRVVNLPLSPPLTPHKYRKVWCKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGY 1156
            E+E EE    +D DT+ +  +  AA       + AVDAV+ G   NAFVA RPPGHH     KP+              GFC    VA AA HA+E  GLSRV+V D D+HHGNGT+++L  +   AF F+S H + ++P TG+ S R     ++N+PL P      +R       + VDAF PELIL+SAG DAH +DP+    +V               DD+  I   + +LA RH+ GRLV+ +EGGY
Sbjct:   73 EREPEEDTIPLDADTWMSPGTLRAARHAVGAAIGAVDAVMDGSVANAFVAMRPPGHH-AETAKPM--------------GFCLFGTVAIAARHAMEHHGLSRVAVFDFDVHHGNGTQDLL-WNEPRAF-FVSSHQSPLWPGTGDTSERGAHDNILNVPLPPDSDGKTFRAAIRPALDRVDAFAPELILVSAGFDAHRDDPLAQLNWV--------------EDDFAWITGELCDLAARHAGGRLVSCLEGGY 293          
BLAST of EWM27455.1 vs. NCBI_GenBank
Match: gi|947818783|ref|WP_056480140.1| (acetoin utilization protein [Methylobacterium sp. Leaf117] >gi|944946135|gb|KQP96877.1| acetoin utilization protein [Methylobacterium sp. Leaf117])

HSP 1 Score: 157.918 bits (398), Expect = 7.243e-39
Identity = 96/247 (38.87%), Postives = 134/247 (54.25%), Query Frame = 0
Query:  915 EVDGDTFGNKESFVAASVGFAGTLQAVDAVIQGRAGNAFVACRPPGHHVGRNGKPILDCVADEKAQDVGWGFCFLNYVAGAALHAVERWGLSRVSVVDIDLHHGNGTEEILSLHRNTAFQFISVHAAGIFPYTGEAS-RARWPRVVNLPLSPPLTPHKYRKVW-CKVDEAVDAFGPELILLSAGHDAHWNDPIGSKEFVGGGKNTVAPIGRLSSDDYFDIVSRVVNLANRHSMGRLVAVMEGGYCCR 1159
            ++DGDT  +  +  AA  G  G + AVDAV+ G   NAFVA RPPGHH  R                   GFC  N  A AA HA E +G SRV++VD D+HHGNGT++I     + +  + S H   +FP TG AS R     +VN+PL       ++R+V+   +   +DAF P+L+++SAG DAH  DP+G  +              L+  D+     R+V+LA +HS GRLV+V+EGGY  +
Sbjct:   78 QIDGDTLLSPGTLEAALRGVGGAVHAVDAVMSGECTNAFVAMRPPGHHAERM---------------TAMGFCLFNNAAIAARHARETYGTSRVAIVDWDVHHGNGTQDIFW--DDKSVLYASTHEMPLFPGTGAASERGNHDTIVNVPLRAGDDSERFREVFEAGILRRLDAFAPDLVIISAGFDAHHLDPLGHVQ--------------LTEADFGWATRRLVDLAAKHSGGRLVSVLEGGYSLK 293          
The following BLAST results are available for this feature:
BLAST of EWM27455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109710|gb|EWM27455.1|0.000e+0100.00Histone deacetylase domain protein [Nannochloropsi... [more]
gi|1055070872|ref|WP_066820381.1|1.743e-4139.58acetoin utilization protein [Mycobacterium sp. 110... [more]
gi|960368639|ref|WP_058261493.1|2.460e-4139.45acetoin utilization protein [Thalassobius gelatino... [more]
gi|1189777027|ref|WP_085817810.1|2.726e-4041.80acetoin utilization protein [Roseovarius halotoler... [more]
gi|907601485|ref|WP_049744206.1|1.270e-3939.58acetoin utilization protein [Mycobacterium goodii]... [more]
gi|1121424089|ref|WP_073676718.1|2.578e-3939.58acetoin utilization protein [Mycobacterium sp. SWH... [more]
gi|1100974399|ref|WP_071481575.1|3.352e-3940.16acetoin utilization protein [Rhodobaca barguzinens... [more]
gi|1189761827|ref|WP_085806334.1|4.130e-3940.33acetoin utilization protein [Roseovarius albus] >g... [more]
gi|1097467814|emb|SFJ79193.1|5.028e-3940.08Acetoin utilization deacetylase AcuC [Jannaschia p... [more]
gi|947818783|ref|WP_056480140.1|7.243e-3938.87acetoin utilization protein [Methylobacterium sp. ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3236rna3236Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications