EWM27460.1, cds3214 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|585109718|gb|EWM27460.1| (Aminoglycoside phosphotransferase [Nannochloropsis gaditana]) HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0 Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0
Query: 1 MAPASSHTVFHTLPVRAGPATPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKRVEEVFTMAWEGGKEGGREGGGKEEDAVFWERIILKGFPLVGEEKTNW 338
MAPASSHTVFHTLPVRAGPATPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKRVEEVFTMAWEGGKEGGREGGGKEEDAVFWERIILKGFPLVGEEKTNW
Sbjct: 1 MAPASSHTVFHTLPVRAGPATPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKRVEEVFTMAWEGGKEGGREGGGKEEDAVFWERIILKGFPLVGEEKTNW 338
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|553176680|ref|XP_005852391.1| (aminotransferase class-iii, partial [Nannochloropsis gaditana CCMP526] >gi|422296143|gb|EKU23442.1| aminotransferase class-iii, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 470.7 bits (1210), Expect = 6.876e-164 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
Query: 1 MAPASSHTVFHTLPVRAGPATPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPR 236
MAPASSHTVFHTLPVRAGPATPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPR
Sbjct: 129 MAPASSHTVFHTLPVRAGPATPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPR 364
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|1072225509|gb|OEU10256.1| (hypothetical protein FRACYDRAFT_247871 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 167.162 bits (422), Expect = 3.551e-44 Identity = 102/312 (32.69%), Postives = 163/312 (52.24%), Query Frame = 0
Query: 21 TPLAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPG----SHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAY-PVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKR-------VEEVFTMAWEGGKEG-GREGGGKEEDAVF 319
TPL VRL WV+G P+ P P+ + +GR+L + AL+ + S R H WD ++ A L+ + +Y+ ++ KR++V SV++AF + +D+ + GE F + +I GD+NDAN ++ QV G+ID GD++ SW + ++++AMAY+ +++ GK + AAA LLRG+ + L + E HL L RL+ S TLGAYS+AQNP N+YLL+HA+PAW AL +WG++ + + E+F +A + G++ D F
Sbjct: 165 TPLVVRLLGWVDGRPMSSFPMLPIE-------------------GIADSGRFLGNLNYALSTLPNSDQLLASKRYHQWDGKNTADLKDFVKYVTDDR-KRSMVESVIKAFQTNI------------LDTIKTGE----TTFEKSIIHGDFNDANFLLNDNF--QVSGVIDFGDSVESWTILDLSVAMAYSMMNSYGKRRRSLSAAAALLRGYNS-VRKLTKDERRHLPLLIACRLSCSATLGAYSYAQNPGNEYLLLHAKPAWDALDLIWGTDSEHRAVVHTSINELFDLACSSTDDDVGKDDVIDCSDLCF 437
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|298711639|emb|CBJ32694.1| (inosine triphosphate pyrophosphatase, putative [Ectocarpus siliculosus]) HSP 1 Score: 166.392 bits (420), Expect = 3.218e-42 Identity = 113/282 (40.07%), Postives = 148/282 (52.48%), Query Frame = 0
Query: 23 LAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGK--AYPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKRVEEVFTMA-WE 301
L+VRL WVEG P+ S P + + G YL R++ L F R H WD+++ +L +T+Y+ ++ +RAL SV+EAF V+ + A FR GV+ GD+NDANII+ P +V G+ID GDA +W VN+VAIAMAYA +S L K P+ AAALLLRG+++ + LP E HLR L RLA S TLGAYS NP N+YL +HA+ W AL LW RV E T A WE
Sbjct: 143 LSVRLLKWVEG---------PMMKSSEVTPELMEKT-----------GAYLGRMQVELDNFYDKSLLRGHTWDLKNTGALSGYTKYV-QDPARRALAESVIEAFRSTVLTTS--------------------AHFRHGVVHGDFNDANIILTPDF-QEVAGVIDFGDAAHTWVVNDVAIAMAYAMLSPLAKESGDPITAAALLLRGFSSVKALLPA-ESRHLRVLVACRLAASGTLGAYSRQLNPTNEYLSVHAEACWDALDLLW----TRVPEEHTKALWE 377
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|219122513|ref|XP_002181588.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406864|gb|EEC46802.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 152.14 bits (383), Expect = 2.661e-38 Identity = 117/345 (33.91%), Postives = 159/345 (46.09%), Query Frame = 0
Query: 7 HTVFHTLPVRAGPATP--LAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQA---LTGFDH------------------PGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDAL----------------------------WSWQVNEVAIAMAYAAVSALGKAY-PVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKRVEEVFTMA 299
H LPV + +P L VRL W G PL + P+ L AGR L RI +A LT D PG R H WD +H A L + +++P++ +R+LV SVL+AF R+++ G ++ FR G + GD+NDANI+V G+ID GD++ SW+V ++++AMAYA +S GK+ + AAA +LRG+ A L E HL L C RLA SVTLGA+SF QNPENKYLL+H++PAW AL LW S+ R E+ A
Sbjct: 156 QVCVHELPVVSSERSPCNLVVRLLTWTSGRPLSALRAFPVE-------------------TLAEAGRLLGRINRAFDKLTLVDSATKTVSDAFHRYDTSVLIPGK-RYHQWDGKHTADLESFVQHIPDQK-RRSLVESVLDAFQRDIL---------------DTGIDKK---FRTGALHGDFNDANILVDEDL--NATGVIDFGDSIISFSVGENDCDDGIQTPYLILSFLCMIRQSWRVLDISVAMAYATLSVYGKSKRMISAAAAILRGYNA-VYPLTELERKHLVLLMCCRLACSVTLGAFSFQQNPENKYLLLHSEPAWEALELLWCSDPGRRFEISNAA 458
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|397615123|gb|EJK63237.1| (hypothetical protein THAOC_16124 [Thalassiosira oceanica]) HSP 1 Score: 152.14 bits (383), Expect = 1.965e-37 Identity = 107/304 (35.20%), Postives = 154/304 (50.66%), Query Frame = 0
Query: 13 LPVRAGPATP--LAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQALT--GFDHP----GSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKA-YPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSF------AQNPENKYLLIHAQPAWSALRTLWGSERKRVEEVFTMAWE 301
LPV + +P L +RL WV+G PL + P+ L+ AG L ++ AL G P S R H WD R+F ++ + + + +R +V SVLE+F +V G EG + FR G+ GD+NDANIIV + +V+G ID GD ++SW+V +V++AM YA +S+ GK + AA +LRG+ + TL +E HLR L RLA S TLG +S+ QNP N+YLL+HA+PAW AL +WGS + + A+E
Sbjct: 222 LPVHSPDHSPAQLVIRLQSWVDGRPLSAIQRCPIE-------------------TLVDAGCVLGQLAMALDELGETSPTALKASTRYHAWDGRNFLDIQSYVAQI-DSTEQRNMVTSVLESFRTVIVE----GNEGSK--------------FRMGINHGDFNDANIIVDDQL--KVKGCIDFGDTVYSWRVLDVSVAMTYAMLSSYGKNDRSISAACAVLRGFNS-VYTLTAQERRHLRLLVACRLATSATLGNFSYKQVEFETQNPGNEYLLLHAKPAWKALEFIWGSGHSALSKAIDKAFE 484
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|1210514547|dbj|GAX26504.1| (hypothetical protein FisN_23Lh029 [Fistulifera solaris]) HSP 1 Score: 144.436 bits (363), Expect = 5.662e-36 Identity = 101/307 (32.90%), Postives = 151/307 (49.19%), Query Frame = 0
Query: 23 LAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQAL-TGF-------DHP---GSHRRHMWDVRHFASLRPWT-RYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYP-VQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLW-GSERKR----------VEEVFTMAWEGGKE 305
L RL WV G P+ + F P+ +L G YL + +A F D P + R H+W++RH +RP+ +YLP K+A ++S+L+AF ++ + GV D NDAN++ + +V G+ID GDA+ +W+V +VA+ MAYA +S+ GK+ + AAA +LRG+ + + L E + L RLA SVTLG YS+ QNPEN YLL+HAQPAW+AL LW +E+KR +++ + +W G E
Sbjct: 148 LCCRLLSWVPGRPMSTILFLPV-------------------ESLFLTGLYLGHLHRAFDVAFPQQHAEKDAPWKKAAQRYHIWNLRHVLDIRPFVIQYLPTVDDKQARILSILDAFAAQLPDFQQ--------------------KLPVGVCHNDLNDANVLCDEQC--RVTGVIDYGDAVETWRVADVAVCMAYAMLSSYGKSQRGISAAAAVLRGYHSVTE-LSEAERRAIPLLIACRLATSVTLGFYSYQQNPENTYLLLHAQPAWNALALLWPLNEKKRTALHAAIHRLLDQAVSQSWCEGSE 412
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|1210513631|dbj|GAX27503.1| (hypothetical protein FisN_23Hh029 [Fistulifera solaris]) HSP 1 Score: 140.969 bits (354), Expect = 1.143e-34 Identity = 103/313 (32.91%), Postives = 148/313 (47.28%), Query Frame = 0
Query: 23 LAVRLFHWVEGTPLVDVPFPPLPPPSSPPPASLPPSLPPQAAALLAAGRYLSRIEQAL-TGF-------DHP---GSHRRHMWDVRHFASLRPWT-RYLPEEGGKRALVVSVLEAF------VREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYP-VQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLW-GSERKR----------VEEVFTMAWEGGKE 305
L RL WV G P+ + F P+ LL G YL + +A F D P + R H+W++RH + P+ +YLP K+A ++S+L+ F ++ +PV GV D NDANI+ + +V G+ID GDA+ +W+ +VAI MAYA +S+ GK+ AAA +LRG+ + + L E + L RLA SVTLG YS+ QNPEN YLL+HAQPAW+AL LW E+KR +++ + +W G E
Sbjct: 148 LCCRLLSWVPGRPMSTILFLPV-------------------ETLLLTGSYLGHLHRAFDVAFPQQHAEKDAPWKKAAQRYHIWNLRHVLDIHPFVIQYLPTADDKQARILSILDVFSAQLPDFQQTLPV--------------------------GVCHNDLNDANILCDEQC--RVTGVIDYGDAVETWRAADVAICMAYAMLSSYGKSQRGFSAAAAVLRGYHSVTQ-LSEAERRAIPLLIACRLATSVTLGFYSYQQNPENTYLLLHAQPAWNALALLWPLDEKKRTALHAAIHRLLDQAVSQSWCEGSE 412
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|514690165|ref|XP_004992657.1| (hypothetical protein PTSG_07237 [Salpingoeca rosetta] >gi|326429443|gb|EGD75013.1| hypothetical protein PTSG_07237 [Salpingoeca rosetta]) HSP 1 Score: 128.642 bits (322), Expect = 1.440e-30 Identity = 81/242 (33.47%), Postives = 122/242 (50.41%), Query Frame = 0
Query: 52 PASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRYLPEEGGKRALVVSVLEAFVREVVPVAEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSALRTLWGSERKRVE 293
P L + A L G L+R++ AL FDHPG HR H+WD++H + L + ++ ++ KRAL V+E + +V +A + V+ D ND NI+++ S V G +D GD + SW++NE+AI +AYA L K+ A+ + R + A P E + L TL ARL S + AYSF+Q+P N YLL+ A P W AL+ L + +V+
Sbjct: 130 PGKLMCEVEHTDAVLADLGASLARMDLALQSFDHPGCHRVHLWDLQHLSQLHVFLPHITDDS-KRALATKVMERYEAQVPQLA--------------------SALPSCVLQNDANDHNIVMSEDG-SGVSGFLDFGDVVHSWRINELAICIAYAC---LEKSDLQHVASTIGREYQAILPLTPA-ELSLLHTLTAARLCQSCIMSAYSFSQDPTNTYLLVTAAPGWQALQALVDMDDAQVK 345
BLAST of EWM27460.1 vs. NCBI_GenBank
Match: gi|470304548|ref|XP_004348146.1| (hypothetical protein CAOG_04318 [Capsaspora owczarzaki ATCC 30864] >gi|765552927|gb|KJE93548.1| hypothetical protein CAOG_004318 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 124.02 bits (310), Expect = 1.260e-28 Identity = 89/233 (38.20%), Postives = 121/233 (51.93%), Query Frame = 0
Query: 52 PASLPPSLPPQAAALLAAGRYLSRIEQALTGFDHPGSHRRHMWDVRHFASLRPWTRY--LPEEGGKRALVVSVLEAFVREVVPV-AEGGGEGLRMDSSQAGEERAVAGFREGVIMGDWNDANIIVAPRAPSQVRGLIDLGDALWSWQVNEVAIAMAYAAVSALGKAYPVQAAALLLRGWAAGSSTLPRREGAHLRTLACARLAISVTLGAYSFAQNPENKYLLIHAQPAWSAL 281
P +L + P AA A GR+++ + A FDHP + R MWD+RH R LPE + A+ S+L+AF V P+ E +D A G R G+I GD ND NI+VA + P QV G+ID GD + S V +VAIA AY L ++ PV AA +L G+ A S L R E L C RLA+SV + A P+++YL + +PAW+AL
Sbjct: 171 PGTLLYEIKPHAAHYEAVGRFVATMADAFDTFDHPAATRDFMWDLRHAPRFRKHLELVKLPE---RHAIAQSILDAFDATVGPLMTEAWANPPALD--------AETGLRIGIIHGDCNDHNILVA-QEPPQVIGIIDFGDVVRSHLVFDVAIAAAYC---VLDQSDPVAVAASVLSGYLAKRS-LNRTELEVFGLLLCVRLAMSVLMSARKQIMYPDDEYLRVTERPAWAAL 387 The following BLAST results are available for this feature:
BLAST of EWM27460.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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