EWM27463.1, cds3208 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|585109723|gb|EWM27463.1| (mitochondrial tricarboxylate transport protein [Nannochloropsis gaditana]) HSP 1 Score: 772.696 bits (1994), Expect = 0.000e+0 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0 Query: 1 MDFLEIYLFLRRRTPQSFIHFRRMSSTADATTAAVPLVPVPISTSAISPSKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILLIFWLDLLNVSCGVSFWSRGFEPHRLLYLDVSFSLCDSG 373 MDFLEIYLFLRRRTPQSFIHFRRMSSTADATTAAVPLVPVPISTSAISPSKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILLIFWLDLLNVSCGVSFWSRGFEPHRLLYLDVSFSLCDSG Sbjct: 1 MDFLEIYLFLRRRTPQSFIHFRRMSSTADATTAAVPLVPVPISTSAISPSKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILLIFWLDLLNVSCGVSFWSRGFEPHRLLYLDVSFSLCDSG 373
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|1210523606|dbj|GAX17566.1| (solute carrier family 25 (mitochondrial citrate transporter), member 1 [Fistulifera solaris]) HSP 1 Score: 370.163 bits (949), Expect = 7.896e-125 Identity = 179/291 (61.51%), Postives = 218/291 (74.91%), Query Frame = 0 Query: 47 ISPSKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILLIF 337 +S +KKK +L AG IAGG+EAT VWPME+IKTQLQLQ ++ AG KP +T M+ G+ YTV+ GFL+LYRGL PTLI + PKAGIRFG N+ K+QL D G LTP KNF+AG+GAG+ E++ +VTPVET+KT+ I N F G++ I+ EG G+YQG AT +KQGSNQGLRFM+FNEYK VTN+G +TPL LGGMSAGCFSTL NNP DVIKTRMQG +A +YKN LDC Q++++EG G++PRLGRVVPGQGIIFMSFETIQN L IF Sbjct: 1 MSGTKKKKNPFTALAAGCIAGGIEATAVWPMEFIKTQLQLQSKM-AGSKPPYTSMMGGLAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLRDTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEKNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTNDGTTPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFLQILKNEGVAALYSGVVPRLGRVVPGQGIIFMSFETIQNTLEANFAIF 290
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|1072223061|gb|OEU07818.1| (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 367.081 bits (941), Expect = 1.043e-123 Identity = 178/288 (61.81%), Postives = 219/288 (76.04%), Query Frame = 0 Query: 50 SKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILLIF 337 +KK + ++ AG IAGG+EAT VWPMEYIKTQLQL+ + G K +TGMISG++YT++ GF +LYRGL PTLI + PKAGIRFG N+ K++L D GKL GKNF+AG+GAG+ E++ +V PVETVKTK+I +NM F G+KHI+ EG GVYQG AT +KQGSNQGLRFM+FNEYKN VTN G+ LTP+ GGMSAGCFSTL NNP DV+KTRMQG +A++YK LDC QQ++ EG G F G++PRLGRVVPGQGIIFMSFE+IQ+ L IF Sbjct: 3 TKKSNNPLTAMAAGCIAGGVEATSVWPMEYIKTQLQLKSK---GSKLPYTGMISGLKYTIETTGFFSLYRGLAPTLIGSIPKAGIRFGLNSVIKEKLRDKDGKLGAGKNFVAGLGAGVSEALLIVAPVETVKTKVIEMNMPFLEGLKHIIKTEGFGGVYQGAFATALKQGSNQGLRFMWFNEYKNRVTNEGEIPLTPIMGLFGGMSAGCFSTLGNNPFDVVKTRMQGTNASQYKGTLDCFQQIISKEGFGAFYAGVVPRLGRVVPGQGIIFMSFESIQSWLEGRFDIF 287
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|298712695|emb|CBJ48720.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 364.385 bits (934), Expect = 1.539e-122 Identity = 173/286 (60.49%), Postives = 223/286 (77.97%), Query Frame = 0 Query: 50 SKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGK-LTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDIL 334 SKK V+SL +G IAG +EA CVWP+EY+KTQLQL ++LPAG+KPK+TG++SG+ YTV+ GF +LYRGL PTL+ + PKAGIRFG N+ KK L + K L+ G+ FLAG GAG++E+IF VTP+ETVKTK I N F GV+ I+ +EG AG+YQG+ ATI KQGSNQGLRFM+FN+YK V+++G L+ + + LGGMSAGCFSTL NNP DV+KTRMQG+DAAKYK+ +DC +Q+++ EGA KG++PRLGRVVPGQGIIFMS+E IQ + I+ Sbjct: 2 SKKSSNPVVSLTSGCIAGAVEAMCVWPLEYVKTQLQLADKLPAGQKPKYTGVVSGLTYTVRTTGFFSLYRGLAPTLLGSMPKAGIRFGGNSELKKILAGKENKKLSSGEQFLAGFGAGVLEAIFAVTPIETVKTKAIQTNAPFMQGVRTILKNEGPAGLYQGVWATIAKQGSNQGLRFMWFNKYKGIVSDDGARPLSDIENLLGGMSAGCFSTLGNNPFDVVKTRMQGVDAAKYKSTVDCFRQIIKDEGAKGLYKGVVPRLGRVVPGQGIIFMSYERIQTFVAGIV 287
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|223996259|ref|XP_002287803.1| (mitochondriale tricarboxylate carrier protein [Thalassiosira pseudonana CCMP1335] >gi|220976919|gb|EED95246.1| mitochondriale tricarboxylate carrier protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 360.533 bits (924), Expect = 3.658e-121 Identity = 172/271 (63.47%), Postives = 205/271 (75.65%), Query Frame = 0 Query: 60 LLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKL 330 + AG IAGG+EAT VWPME+IKTQLQLQ + P + GMISG+ Y ++ GF +LYRGL PTLI + PKAGIRFG NA K +L D GKLTPGKNF+AG+GAG+ E++ +V PVETVKTK I LNM F G +HI+A EGM GVYQG AT MKQGSNQGLRFM+FNEYK VT++G+ LTPL GGMSAGCFST+ NNP DV+KTRMQG +++Y LDC +Q+ +EG G F G++PRLGRVVPGQGIIFMSFETI L Sbjct: 1 MAAGCIAGGIEATAVWPMEFIKTQLQLQSKAKGSSLP-YNGMISGLSYYIRTTGFFSLYRGLAPTLIGSIPKAGIRFGLNARIKDRLRDSDGKLTPGKNFVAGLGAGVAEALIIVAPVETVKTKCIELNMPFVAGFRHILATEGMGGVYQGAAATAMKQGSNQGLRFMWFNEYKRIVTDDGEKKLTPLMGLFGGMSAGCFSTIGNNPFDVVKTRMQGTKSSQYAGTLDCFKQVFANEGIGAFYAGVVPRLGRVVPGQGIIFMSFETIVQNL 270
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|219112891|ref|XP_002186029.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582879|gb|ACI65499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 341.658 bits (875), Expect = 1.274e-113 Identity = 167/287 (58.19%), Postives = 203/287 (70.73%), Query Frame = 0 Query: 52 KKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMD-DQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDILLIF 337 KK ++++ AG IAGG+EATCVWPMEYIK + + P+ + YTV GF +LYRGL PTL+ + PKAGIRFG N+ K L D D G LTP KNF+AG+GAG+ E++ +V PVETVKTK I +NM+F G +HI+ HEG+AGVYQG AT +KQGSNQGLRFM+FNEYK VT +G+ +TPL GGMSAGCFSTL NNP DV+KTRMQG AA+Y LDC +Q++ EG G G++PRLGRVVPGQGIIFMSFETIQN L IF Sbjct: 5 KKSNPILAMAAGCIAGGIEATCVWPMEYIKVSADCDDDF-SKSTPE------NIIYTVNTTGFFSLYRGLAPTLLGSIPKAGIRFGLNSVIKDSLRDKDTGGLTPAKNFIAGLGAGVSEALLIVAPVETVKTKCIEMNMAFLQGFRHILKHEGLAGVYQGAAATALKQGSNQGLRFMWFNEYKVIVTKDGKEPMTPLLGLFGGMSAGCFSTLGNNPFDVVKTRMQGTKAAQYNGTLDCFKQIVSKEGVGALYAGVVPRLGRVVPGQGIIFMSFETIQNALKKQFTIF 284
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|1210523366|dbj|GAX18003.1| (hypothetical protein FisN_18Hh216 [Fistulifera solaris]) HSP 1 Score: 320.857 bits (821), Expect = 5.369e-106 Identity = 153/246 (62.20%), Postives = 186/246 (75.61%), Query Frame = 0 Query: 52 KKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTNNGQHNLTPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEG 297 KK +L AG IAGG+EAT VWPME+IKTQLQLQ ++ AG KP +T M+ G+ YTV+ GFL+LYRGL PTLI + PKAGIRFG N+ K+QL D G LTP KNF+AG+GAG+ E++ +VTPVET+KT+ I N F G++ I+ EG G+YQG AT +KQGSNQGLRFM+FNEYK VT +G +TPL LGGMSAGCFSTL NNP DVIKTRMQG +A +YKN LDC QQ++RHEG Sbjct: 5 KKKNPFTALAAGCIAGGIEATAVWPMEFIKTQLQLQSKM-AGSKPPYTSMMGGLAYTVRETGFLSLYRGLAPTLIGSIPKAGIRFGLNSIIKEQLRDTNGNLTPAKNFVAGLGAGVAEALIIVTPVETIKTRCIEQNQPFRAGMQEILRKEGWKGIYQGASATALKQGSNQGLRFMWFNEYKRIVTKDGATPMTPLLGLLGGMSAGCFSTLGNNPFDVIKTRMQGTEARRYKNTLDCFQQILRHEG 249
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|675168049|ref|XP_008892909.1| (hypothetical protein PPTG_01385 [Phytophthora parasitica INRA-310] >gi|566022661|gb|ETI45572.1| hypothetical protein F443_09877 [Phytophthora parasitica P1569] >gi|567959960|gb|ETK85524.1| hypothetical protein L915_09675 [Phytophthora parasitica] >gi|567988690|gb|ETL38963.1| hypothetical protein L916_09579 [Phytophthora parasitica] >gi|568106448|gb|ETN21078.1| hypothetical protein PPTG_01385 [Phytophthora parasitica INRA-310] >gi|570326268|gb|ETO74216.1| hypothetical protein F444_09971 [Phytophthora parasitica P1976] >gi|570950123|gb|ETP15380.1| hypothetical protein F441_09827 [Phytophthora parasitica CJ01A1] >gi|570983685|gb|ETP43467.1| hypothetical protein F442_09782 [Phytophthora parasitica P10297]) HSP 1 Score: 286.574 bits (732), Expect = 7.173e-92 Identity = 143/288 (49.65%), Postives = 192/288 (66.67%), Query Frame = 0 Query: 52 KKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTN---------NGQHNLT----PLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETI 326 K +++ AGAIAGG+E +WPME IKT LQL + ++TGM+ G RY +Q G +LYRGL P L+ + PKAGIRFG+ + K++L D+ GK + +N AG+ AG IE+ F TP+ET+KTKLI N + G K I+A EG+ G+YQGL ATI+KQ +NQGLRFM+F+E++ V + N+T S +GGM+AG FS NNP DV+KTRMQGL A KYKN LDC +Q++ HEG G F G++PRLGRV+PGQG+IFMS+++I Sbjct: 4 KSKNPMVATTAGAIAGGIEILTIWPMEMIKTNLQL-----GTMRAQYTGMVGGFRYHIQTDGVGSLYRGLAPVLVGSIPKAGIRFGAFDFIKRRLEDENGKTSAMRNLAAGMMAGSIEATFTTTPIETLKTKLIGANAGMWEGTKMILAKEGIRGIYQGLWATILKQSTNQGLRFMWFSEFQKRVNPEFLERHGIISDAQNMTGSQRASLSLIGGMTAGIFSVFGNNPFDVVKTRMQGLQAQKYKNTLDCFRQMLLHEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 286
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|970634177|gb|KUF79519.1| (Tricarboxylate transport protein [Phytophthora nicotianae]) HSP 1 Score: 285.804 bits (730), Expect = 1.332e-91 Identity = 143/288 (49.65%), Postives = 191/288 (66.32%), Query Frame = 0 Query: 52 KKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWVTN---------NGQHNLT----PLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETI 326 K +++ AGAIAGG+E +WPME IKT LQL + ++TGM+ G RY +Q G +LYRGL P L+ + PKAGIRFG+ + K+ L D+ GK + +N AG+ AG IE+ F TP+ET+KTKLI N + G K I+A EG+ G+YQGL ATI+KQ +NQGLRFM+F+E++ V + N+T S +GGM+AG FS NNP DV+KTRMQGL A KYKN LDC +Q++ HEG G F G++PRLGRV+PGQG+IFMS+++I Sbjct: 4 KSKNPMVATTAGAIAGGIEILTIWPMEMIKTNLQLGTM-----RAQYTGMVGGFRYHIQTDGVGSLYRGLAPVLVGSIPKAGIRFGAFDFIKRXLEDENGKTSAMRNLAAGMMAGSIEATFTTTPIETLKTKLIGANAGMWEGTKMILAKEGIRGIYQGLWATILKQSTNQGLRFMWFSEFQKRVNPEFLERHGIISDAQNMTGSQRASLSLIGGMTAGIFSVFGNNPFDVVKTRMQGLQAQKYKNTLDCFRQMLLHEGVGSFYAGVVPRLGRVIPGQGVIFMSYDSI 286
BLAST of EWM27463.1 vs. NCBI_GenBank
Match: gi|673052803|ref|XP_008880362.1| (hypothetical protein H310_14313 [Aphanomyces invadans] >gi|574463918|gb|ETV90973.1| hypothetical protein H310_14313 [Aphanomyces invadans]) HSP 1 Score: 286.96 bits (733), Expect = 2.093e-91 Identity = 148/296 (50.00%), Postives = 194/296 (65.54%), Query Frame = 0 Query: 49 PSKKKPTQVISLLAGAIAGGMEATCVWPMEYIKTQLQLQERLPAGEKPKFTGMISGMRYTVQNHGFLALYRGLTPTLISAFPKAGIRFGSNAYFKKQLMDDQGKLTPGKNFLAGVGAGIIESIFVVTPVETVKTKLIHLNMSFFGGVKHIVAHEGMAGVYQGLGATIMKQGSNQGLRFMFFNEYKNWV----TNNG-QHNL-----TPLTSFLGGMSAGCFSTLCNNPLDVIKTRMQGLDAAKYKNALDCAQQLMRHEGAGVFLKGLIPRLGRVVPGQGIIFMSFETIQNKLVDIL 334 P KK P ++++AGAIAGG+E +WPME IKT LQL K +T ++ G RY +Q G L+LYRGL P I++ PKAG+RFG+ K+ L DDQGK TP +N AG+ AG IE+I + TP ET+KTKLI N GV+ I+ EG+ G+YQGL AT+MKQ +N GLRF++F+EYK V G HN + + SF+GGM+AG FST NNP DV+KT+MQGL +Y N LDCA +++ +G F G++PRLGRVVPGQGIIFMS++TI + L Sbjct: 40 PPKKHPG--VAVVAGAIAGGLEMCSIWPMELIKTNLQLGTM-----KRHYTSVLPGFRYHIQTGGALSLYRGLAPVFIASLPKAGLRFGAFDSIKQWLADDQGKSTPLRNMAAGMSAGAIEAILITTPTETIKTKLIDANTGVLYGVQTILQREGVRGLYQGLTATVMKQATNTGLRFLWFSEYKARVPGLLAQRGIDHNALTSTESAIVSFVGGMTAGIFSTFGNNPFDVVKTQMQGLQGTRYVNTLDCAMTILKRDGIAGFYAGVVPRLGRVVPGQGIIFMSYDTISTHVASFL 328 The following BLAST results are available for this feature:
BLAST of EWM27463.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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