EWM27504.1, cds3181 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|585109768|gb|EWM27504.1| (Ribosomal protein L15e [Nannochloropsis gaditana]) HSP 1 Score: 412.149 bits (1058), Expect = 1.538e-145 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR Sbjct: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|676386677|ref|XP_009036617.1| (hypothetical protein AURANDRAFT_60075 [Aureococcus anophagefferens] >gi|323452746|gb|EGB08619.1| hypothetical protein AURANDRAFT_60075 [Aureococcus anophagefferens]) HSP 1 Score: 327.02 bits (837), Expect = 7.960e-112 Identity = 154/205 (75.12%), Postives = 179/205 (87.32%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK+LEE+W++KQ D+LR+L+R+RAW+YRQ K+ R RPTR DKAH+LGYKAK+G+V+YR AVRRGGRKRPN KGIVYGKPK+QGINQLK+ RNL+S AEER G+K G LRVLNSYWVNQDATYKYYEVI VDP H IR D R+NWIVNPTHKHRE RGLTS+GR SRGLRK+GHRA+NIIGSS +WKRRN +SL+RYR Sbjct: 1 MGAYKYLEEMWKRKQCDVLRYLMRIRAWQYRQQTKVCRCTRPTRHDKAHKLGYKAKEGYVIYRSAVRRGGRKRPNGKGIVYGKPKHQGINQLKFARNLQSVAEERVGKKCGNLRVLNSYWVNQDATYKYYEVIAVDPSHAVIRNDPRINWIVNPTHKHRECRGLTSAGRKSRGLRKQGHRANNIIGSSRRAAWKRRNNLSLRRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|299472638|emb|CBN78290.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 318.546 bits (815), Expect = 1.549e-108 Identity = 152/205 (74.15%), Postives = 176/205 (85.85%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK+LEELWRKKQ+D+LRF+LRVRAWEYRQLP++ +++ PTRTDKAHRLGYKAKQG+ + RVAVRRGGRKRPN KGIVYGKPK+ GIN++K VRNL+S AEER G K +RVLNSYWVNQDAT+KYYEVI VDP H AIR D R+ WI P KHRE RGLTS+GR RGLRK+GHRA+N+IGSS +WKRRNT+SLKRYR Sbjct: 1 MGAYKYLEELWRKKQSDVLRFVLRVRAWEYRQLPRVCKVSHPTRTDKAHRLGYKAKQGYTMVRVAVRRGGRKRPNAKGIVYGKPKHHGINKIKAVRNLRSVAEERVGAKFTNMRVLNSYWVNQDATFKYYEVITVDPSHMAIRNDPRIQWITKPVMKHRECRGLTSAGRQHRGLRKKGHRANNLIGSSRRAAWKRRNTLSLKRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|673047297|ref|XP_008877609.1| (60S ribosomal protein [Aphanomyces invadans] >gi|574466773|gb|ETV93800.1| 60S ribosomal protein [Aphanomyces invadans]) HSP 1 Score: 315.849 bits (808), Expect = 1.689e-107 Identity = 155/205 (75.61%), Postives = 178/205 (86.83%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK++ ELW++KQ+D+LRFLLRVRAW+YRQLP +YR+ RP+R DKA R+GYKAKQG+V RVAVRRGGRKRPN KGIVYGKPK+ GINQLK VRNL+S AEERAG K LRVLNSYWVNQDATYKY+EVILVD HKAIRRDAR+NWIVN HK RE RGLTS+GR +RGLR+RGH+A+ IIGSS +WKRRNT SL+RYR Sbjct: 1 MGAYKYIAELWKRKQSDVLRFLLRVRAWQYRQLPVVYRLTRPSRLDKARRVGYKAKQGYVAVRVAVRRGGRKRPNSKGIVYGKPKHHGINQLKDVRNLRSIAEERAGAKFTNLRVLNSYWVNQDATYKYFEVILVDHSHKAIRRDARINWIVNAVHKRREKRGLTSAGRQARGLRQRGHKANKIIGSSRRQNWKRRNTTSLRRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|325186477|emb|CCA20982.1| (60S ribosomal protein L151 putative [Albugo laibachii Nc14]) HSP 1 Score: 315.079 bits (806), Expect = 4.023e-107 Identity = 153/205 (74.63%), Postives = 176/205 (85.85%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK+LEELW++KQ+D+LRFL+RVRAWEYRQ P IYR RPTR DKA RLGYKAKQG+V+ R AVRRGGRKRPN KGIVYGKPK+ GINQLK+ RNL+S AEERAG + LRVLNSYW+NQDATYKY+EVI+VD HK IR+D R+NWIVNPTHK RE RGLTS+GR RGLRKRGHRA+ I G S+ +WKRRNT+SL+RYR Sbjct: 1 MGAYKYLEELWKRKQSDVLRFLIRVRAWEYRQQPVIYRTTRPTRIDKARRLGYKAKQGYVIVRAAVRRGGRKRPNSKGIVYGKPKHHGINQLKFARNLRSVAEERAGARFTNLRVLNSYWINQDATYKYFEVIMVDHSHKVIRQDPRINWIVNPTHKRREKRGLTSAGRQGRGLRKRGHRANKIQGGSSRHNWKRRNTLSLRRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|1026757678|gb|OAE19886.1| (hypothetical protein AXG93_1130s1390 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 314.694 bits (805), Expect = 5.214e-107 Identity = 155/205 (75.61%), Postives = 176/205 (85.85%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK++EELWRKKQ+D+LRFLLRVR WE+RQLP I R+ RP+R DKA RLGYKAKQG+VVYR+ VRRGGRKRP KGIVYGKPKNQGI QLK+ RNL+S AEERAGRKLGGLRVLNSYW+NQD+TYKYYEVILVDP H AIR D R+NWIVNP HKHRELRGLTS+G+ RGLR RGH +N S + +WKR NT+SL+RYR Sbjct: 1 MGAYKYIEELWRKKQSDVLRFLLRVRCWEFRQLPGIVRITRPSRPDKARRLGYKAKQGYVVYRIRVRRGGRKRPVSKGIVYGKPKNQGITQLKFQRNLRSVAEERAGRKLGGLRVLNSYWINQDSTYKYYEVILVDPAHNAIRNDPRINWIVNPVHKHRELRGLTSTGKKHRGLRGRGH-LYNKSRPSVHATWKRHNTLSLRRYR 204
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|953494098|emb|CEG43692.1| (60s ribosomal protein [Plasmopara halstedii]) HSP 1 Score: 313.538 bits (802), Expect = 1.709e-106 Identity = 154/205 (75.12%), Postives = 177/205 (86.34%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK+LEELW++KQ+D+LRFLLRVRAWEYRQLP I+R+ PTR DKA RLGYKAKQGFV+ RVAVRRGGRKRPN KGIVYGKPK+ GIN+LK+ RNL+S AEERAG K LRVLNSYWVNQDAT+KY+E+I+VD HK IRRD R+NWIVN HK R+ RGLTS+GR RGLRKRGHRA+ IIGSS +WKRRNT+SL+RYR Sbjct: 1 MGAYKYLEELWKRKQSDVLRFLLRVRAWEYRQLPVIHRVTGPTRLDKARRLGYKAKQGFVIVRVAVRRGGRKRPNSKGIVYGKPKHHGINELKFERNLRSVAEERAGNKFTNLRVLNSYWVNQDATHKYFEIIMVDHSHKVIRRDPRINWIVNAVHKGRQQRGLTSAGRQGRGLRKRGHRANKIIGSSFRQNWKRRNTLSLRRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|635370884|emb|CCI40961.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 312.768 bits (800), Expect = 3.192e-106 Identity = 153/205 (74.63%), Postives = 176/205 (85.85%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK+LEELW++KQ+D+LRFL+RVRAWEYRQ P IYR RPTR DKA RLGYKAKQG+V+ R AVRRGGRKRPN KGIVYGKPK+ GINQLK+ RNL+S AEERAG + LRVLNSYW+NQDATYKYYEVI+VD HK IR+D R++WIVNPTHK RE RGLTS+GR RGLRKRGHRA+ I G S+ +WKRRNT+SL+RYR Sbjct: 1 MGAYKYLEELWKRKQSDVLRFLIRVRAWEYRQQPVIYRAPRPTRIDKARRLGYKAKQGYVIVRAAVRRGGRKRPNSKGIVYGKPKHHGINQLKFARNLRSVAEERAGARFTNLRVLNSYWINQDATYKYYEVIMVDHSHKVIRQDPRISWIVNPTHKRREKRGLTSAGRQGRGLRKRGHRANKIQGGSSRHNWKRRNTLSLRRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|301119533|ref|XP_002907494.1| (60S ribosomal protein L15-1 [Phytophthora infestans T30-4] >gi|262106006|gb|EEY64058.1| 60S ribosomal protein L15-1 [Phytophthora infestans T30-4]) HSP 1 Score: 312.768 bits (800), Expect = 3.803e-106 Identity = 153/205 (74.63%), Postives = 176/205 (85.85%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK+LEELW++KQ+D+LRFLLRVRAWEYRQLP I+R+ PTR DKA RLGYKAKQG+V+ RVAVRRGGRKRPN KGIVYGKPK+ GIN+LK+ RNL+S AEERAG K LRVLNSYWVNQDATYKY+E+I+VD HK IRRD R+NWI N HK R+ RGLTS+GR RGLRKRGHRA+ IIGSS +WKRRNT+SL+RYR Sbjct: 1 MGAYKYLEELWKRKQSDVLRFLLRVRAWEYRQLPVIHRVTGPTRVDKARRLGYKAKQGYVIVRVAVRRGGRKRPNSKGIVYGKPKHHGINELKFERNLRSVAEERAGNKFTNLRVLNSYWVNQDATYKYFEIIMVDHSHKTIRRDPRINWIANAVHKGRQQRGLTSAGRQGRGLRKRGHRANKIIGSSFRQNWKRRNTLSLRRYR 205
BLAST of EWM27504.1 vs. NCBI_GenBank
Match: gi|698823183|ref|XP_009844620.1| (60S ribosomal protein [Aphanomyces astaci] >gi|574100284|gb|ETV65867.1| 60S ribosomal protein [Aphanomyces astaci]) HSP 1 Score: 312.383 bits (799), Expect = 3.838e-106 Identity = 153/205 (74.63%), Postives = 177/205 (86.34%), Query Frame = 0 Query: 1 MGAYKFLEELWRKKQADLLRFLLRVRAWEYRQLPKIYRMNRPTRTDKAHRLGYKAKQGFVVYRVAVRRGGRKRPNPKGIVYGKPKNQGINQLKWVRNLKSKAEERAGRKLGGLRVLNSYWVNQDATYKYYEVILVDPQHKAIRRDARVNWIVNPTHKHRELRGLTSSGRSSRGLRKRGHRAHNIIGSSAYGSWKRRNTISLKRYR 205 MGAYK++ ELW++KQ+D+LRFLLRVRAW+YRQLP +YR+ RP+R DKA R+GYKAKQG+V RVAVRRGGRKRPN KGIVYGKPK+ GINQLK VRNL+S AEERAG K LRVLNSYWVNQDATYKY+EVIL+D HKAIRRDAR+NWIVN HK RE RGLTS+GR +RGLR+RGH+A+ I GSS +WKRRNT SL+RYR Sbjct: 1 MGAYKYIAELWKRKQSDVLRFLLRVRAWQYRQLPVVYRLTRPSRLDKARRVGYKAKQGYVAVRVAVRRGGRKRPNSKGIVYGKPKHHGINQLKDVRNLRSIAEERAGAKFTNLRVLNSYWVNQDATYKYFEVILIDHSHKAIRRDARINWIVNAVHKRREKRGLTSAGRQARGLRQRGHKANKIQGSSRRQNWKRRNTTSLRRYR 205 The following BLAST results are available for this feature:
BLAST of EWM27504.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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