EWM27521.1, cds3163 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|585109787|gb|EWM27521.1| (Zinc/iron permease [Nannochloropsis gaditana]) HSP 1 Score: 945.266 bits (2442), Expect = 0.000e+0 Identity = 474/474 (100.00%), Postives = 474/474 (100.00%), Query Frame = 0 Query: 1 MAAGATSGRGGFVGLNLVLAALTLAVFLSTRRLKLAPSHVVFLNALSCGILVGAVLGIILPEGFEAQQAGGKGREASGIPILIGYAFQLLLDNVGTACRSGHHHHSSVLSGHPKHSPLPATPRDTGEYGMEEDSERLDSLTVEASTGRAQEGGNGRFLSDSRRTSSALRSPWSSEDENMVEMTSVEGVPPGVPPTTRASQAHFPPPSTSAACRGGRQPGRSSNSPLYPRESQRDHYRPSQRTSKARGDGSLPALRGPSGPTLLGSGDGGSPQPAFLGLLVHCLADGVALGASSLGTSSLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELLHSHEHVRNTFVTRAVVLLLLIMGMFAVPLLARLAPDHGFR 474 MAAGATSGRGGFVGLNLVLAALTLAVFLSTRRLKLAPSHVVFLNALSCGILVGAVLGIILPEGFEAQQAGGKGREASGIPILIGYAFQLLLDNVGTACRSGHHHHSSVLSGHPKHSPLPATPRDTGEYGMEEDSERLDSLTVEASTGRAQEGGNGRFLSDSRRTSSALRSPWSSEDENMVEMTSVEGVPPGVPPTTRASQAHFPPPSTSAACRGGRQPGRSSNSPLYPRESQRDHYRPSQRTSKARGDGSLPALRGPSGPTLLGSGDGGSPQPAFLGLLVHCLADGVALGASSLGTSSLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELLHSHEHVRNTFVTRAVVLLLLIMGMFAVPLLARLAPDHGFR Sbjct: 1 MAAGATSGRGGFVGLNLVLAALTLAVFLSTRRLKLAPSHVVFLNALSCGILVGAVLGIILPEGFEAQQAGGKGREASGIPILIGYAFQLLLDNVGTACRSGHHHHSSVLSGHPKHSPLPATPRDTGEYGMEEDSERLDSLTVEASTGRAQEGGNGRFLSDSRRTSSALRSPWSSEDENMVEMTSVEGVPPGVPPTTRASQAHFPPPSTSAACRGGRQPGRSSNSPLYPRESQRDHYRPSQRTSKARGDGSLPALRGPSGPTLLGSGDGGSPQPAFLGLLVHCLADGVALGASSLGTSSLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELLHSHEHVRNTFVTRAVVLLLLIMGMFAVPLLARLAPDHGFR 474
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|66396565|gb|AAH96499.1| (LOC613053 protein, partial [Xenopus tropicalis]) HSP 1 Score: 84.7297 bits (208), Expect = 1.014e-14 Identity = 61/180 (33.89%), Postives = 90/180 (50.00%), Query Frame = 0 Query: 269 GSPQPAFLGLLVHCLADGVALGASSLGTS-SLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELL---HSHEHVRNTF 444 G+ A LGL++H ADGVALGA+ + S+Q+ V+ A+++HK P AF + L H GL + Q+ + H LAFS A+PL ++T+LIL + + H T G+G+LFSAGTFLYV+ H++PE+ H H HV + + Sbjct: 113 GTSITATLGLVIHAAADGVALGAAVASSQVSVQVIVFFAVILHKAPAAFGLVSFLM---------------HAGLEKAQIRK-------------------HLLAFSLAAPLLTITTYLILSL--------TGGTSQHRLTATGNGMLFSAGTFLYVATVHVLPEISGRGHHHHHVTSEY 250
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|301620884|ref|XP_002939794.1| (PREDICTED: zinc transporter ZIP9-B [Xenopus tropicalis] >gi|1043420410|gb|OCA33040.1| hypothetical protein XENTR_v90013015mg [Xenopus tropicalis]) HSP 1 Score: 83.5741 bits (205), Expect = 3.108e-14 Identity = 61/180 (33.89%), Postives = 90/180 (50.00%), Query Frame = 0 Query: 269 GSPQPAFLGLLVHCLADGVALGASSLGTS-SLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELL---HSHEHVRNTF 444 G+ A LGL++H ADGVALGA+ + S+Q+ V+ A+++HK P AF + L H GL + Q+ + H LAFS A+PL ++T+LIL + + H T G+G+LFSAGTFLYV+ H++PE+ H H HV + + Sbjct: 136 GTSITATLGLVIHAAADGVALGAAVASSQVSVQVIVFFAVILHKAPAAFGLVSFLM---------------HAGLEKAQIRK-------------------HLLAFSLAAPLLTITTYLILSL--------TGGTSQHRLTATGNGMLFSAGTFLYVATVHVLPEISGRGHHHHHVTSEY 273
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|147900464|ref|NP_001079555.1| (uncharacterized protein LOC379242 [Xenopus laevis] >gi|28277303|gb|AAH44279.1| MGC53199 protein [Xenopus laevis] >gi|1050377255|gb|OCT79452.1| hypothetical protein XELAEV_18026262mg [Xenopus laevis]) HSP 1 Score: 83.5741 bits (205), Expect = 3.545e-14 Identity = 61/180 (33.89%), Postives = 89/180 (49.44%), Query Frame = 0 Query: 269 GSPQPAFLGLLVHCLADGVALGASSLGTS-SLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELL---HSHEHVRNTF 444 G+ A LGL++H ADGVALGA+ + S+Q+ V+ A+++HK P AF T L H GL + Q+ + H LAFS A+PL ++T+LIL + + H G+G+LFSAGTFLYV+ H++PE+ H H HV + + Sbjct: 136 GTSITATLGLVIHAAADGVALGAAVASSQVSVQVIVFFAVILHKAPAAFGLVTFLM---------------HAGLEKAQIRK-------------------HLLAFSLAAPLLTITTYLILSL--------TGGTSQHRLAATGNGMLFSAGTFLYVATVHVLPEISGRGHQHHHVTSEY 273
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|1160098003|ref|XP_020377435.1| (zinc transporter ZIP9-like isoform X1 [Rhincodon typus]) HSP 1 Score: 83.9593 bits (206), Expect = 4.450e-14 Identity = 73/226 (32.30%), Postives = 107/226 (47.35%), Query Frame = 0 Query: 216 RQPGRSSNSPLYPRESQRDHYRPSQRTSKARGDGSLPALRGPSGPTLLGSGDGGSPQPAFLGLLVHCLADGVALGASSLGTS--SLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELLHSHEH 439 RQ G + N+ P + Q+ Y PS + + + SGP + GS A LGL++H ADGVALG ++ G+S SLQ+ V+ A+++HK P +F + L H GL E+ Q Q+ H FS A+PL A++T+ I+ + + P H T G GLLFSAGTFLYV+ H++PE+ +H Sbjct: 126 RQGGEAPNAGQQPSDGQQ--YSPSLHPASYTQPVASTSTETSSGPAV------GSSLTATLGLVIHAAADGVALGTAA-GSSQISLQVIVFFAVILHKAPASFGLVSYLM---------------HAGL------EKRQIQK-------------HLFIFSLAAPLLAVTTYFIV--------SKSSVGPLHQTKASGIGLLFSAGTFLYVASVHVLPEVSSQTQH 300
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|1069360356|ref|XP_018120450.1| (PREDICTED: zinc transporter ZIP9-like [Xenopus laevis] >gi|1050375364|gb|OCT77562.1| hypothetical protein XELAEV_18028654mg [Xenopus laevis]) HSP 1 Score: 82.4185 bits (202), Expect = 8.732e-14 Identity = 59/180 (32.78%), Postives = 90/180 (50.00%), Query Frame = 0 Query: 269 GSPQPAFLGLLVHCLADGVALGASSLGTS-SLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELL---HSHEHVRNTF 444 G+ A LGL++H ADGVALGA+ + S+Q+ V+ A+++HK P AF + L H GL + Q+ + H LAFS A+PL ++T+L+L + + + H G+G+LFSAGTFLYV+ H++PE+ H H HV + + Sbjct: 136 GTSITATLGLVIHAAADGVALGAAVASSQVSVQVIVFFAVILHKAPAAFGLVSFLM---------------HAGLEKAQIRK-------------------HLLAFSLAAPLLTITTYLVLSLTEG--------TSQHRLAATGNGMLFSAGTFLYVATVHVLPEINGRGHQHHHVASEY 273
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|1072253968|ref|XP_018412004.1| (PREDICTED: zinc transporter ZIP9-B-like [Nanorana parkeri]) HSP 1 Score: 82.0333 bits (201), Expect = 1.255e-13 Identity = 60/166 (36.14%), Postives = 86/166 (51.81%), Query Frame = 0 Query: 269 GSPQPAFLGLLVHCLADGVALGASSLGTS-SLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPEL 433 G+ A LGL++H ADGVALGA+ + S+Q+ V+ A+++HK P AF + L H GL E++Q Q+ H LAFS A+PL A++T+LIL + S H + G G+LFSAGTFLYV+ H++PE+ Sbjct: 138 GTSITATLGLVIHAAADGVALGAAVASSQVSVQVIVFFAVILHKAPAAFGLVSFLM---------------HAGL------EKKQIQK-------------HLLAFSVAAPLLAITTYLILTM--------TGGSSQHKLSATGHGMLFSAGTFLYVATVHVLPEI 261
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|632960911|ref|XP_007896464.1| (PREDICTED: zinc transporter ZIP9-B-like [Callorhinchus milii]) HSP 1 Score: 80.1073 bits (196), Expect = 5.446e-13 Identity = 63/168 (37.50%), Postives = 85/168 (50.60%), Query Frame = 0 Query: 269 GSPQPAFLGLLVHCLADGVALGASSLGTSSL---QLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPEL 433 GS A +GL++H ADGVALG ++ SSL Q+ V+LA+++HK P AFA + L H GL E+ Q K H L FS A+PL A++T I+ + RA S H T G G+LFSAGTFLYV+ H++PE+ Sbjct: 134 GSSVTATIGLVIHAAADGVALGTAA--ASSLLPVQVIVFLAVILHKAPAAFALVSFLL---------------HAGL---------------ERRQIHK----HLLVFSLAAPLLAITTFFIV-------STSRANSTLHRTEATGMGMLFSAGTFLYVASVHVLPEV 258
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|768449505|ref|XP_011566839.1| (PREDICTED: zinc transporter ZIP9 [Plutella xylostella]) HSP 1 Score: 79.337 bits (194), Expect = 9.283e-13 Identity = 59/167 (35.33%), Postives = 84/167 (50.30%), Query Frame = 0 Query: 274 AFLGLLVHCLADGVALGASSLGT-SSLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPELLHSHEH 439 A +GL+VH ADGVALGA++ + + ++L V+LA+M+HK P AF T L H GL ++++ +R H L FS A+P+ L T + + +Q D N T G +LFSAGTFLYV+ H++PEL H H H Sbjct: 137 ATIGLVVHAAADGVALGAAATTSHADVELVVFLAIMLHKAPAAFGLVTFLM---------------HAGLERSRI-------------RR------HLLIFSCAAPVMTLLTFFCIGAESKQTMS------DVNAT--GIAMLFSAGTFLYVATVHVLPELTHPHSH 261
BLAST of EWM27521.1 vs. NCBI_GenBank
Match: gi|683473598|gb|KFZ67807.1| (Zinc transporter ZIP9, partial [Podiceps cristatus]) HSP 1 Score: 76.2554 bits (186), Expect = 1.174e-12 Identity = 59/176 (33.52%), Postives = 86/176 (48.86%), Query Frame = 0 Query: 267 DGGSPQPAFLGLLVHCLADGVALGAS-SLGTSSLQLTVYLALMIHKLPVAFATGTLLAKSLSPRTGPGTLRSPHQGLAQTQLLEQEQEQQPSEQEQRAKSFLYHALAFSFASPLAALSTHLILRVQQRQQAKERAESPDHNTTFVGSGLLFSAGTFLYVSVGHIMPE---LLHSHE 438 G S LGL+VH ADGVALGA+ S +S+QL V++A+M+HK P AF + L H GL + ++ + H L F+ A+P+ ++ T+L L ++ E N T G +LFSAGTFLYV+ H++PE + HSH+ Sbjct: 7 SGNSKITTTLGLVVHAAADGVALGAAASTSQTSVQLIVFVAIMLHKAPAAFGLVSFLM---------------HAGLERNRIRK-------------------HLLVFALAAPVMSMVTYLGLSKSSKEALSEV------NAT--GVAMLFSAGTFLYVATVHVLPEVGGIAHSHK 140 The following BLAST results are available for this feature:
BLAST of EWM27521.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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