EWM27517.1, cds3162 (CDS) Nannochloropsis gaditana

Overview
NameEWM27517.1
Unique Namecds3162
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:908895..909962 -
Alignment locationCM002460.1:908719..908852 -
Alignment locationCM002460.1:908544..908665 -
Alignment locationCM002460.1:907526..908391 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27517.1
Producthistone deacetylase superfamily
Orig transcript idgnl|cribi|Naga_100101g3.9055.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:908895..909962 -
CM002460.1supercontigCM002460.1:908719..908852 -
CM002460.1supercontigCM002460.1:908544..908665 -
CM002460.1supercontigCM002460.1:907526..908391 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR001279Beta-lactamas-like
IPR000286His_deacetylse
Homology
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|585109783|gb|EWM27517.1| (histone deacetylase superfamily [Nannochloropsis gaditana])

HSP 1 Score: 1501.49 bits (3886), Expect = 0.000e+0
Identity = 729/729 (100.00%), Postives = 729/729 (100.00%), Query Frame = 0
Query:    1 MGVRRTKTIFFVWLLHLSLAAFVVHAFVTNVAKPALRRLLPRCAAGVNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYDPDNVVGRFSDSACLHPERPTKAFFKAANGRPLKVFFNCNEFRNNHRTLPWIALVSWKKTLTYLFAAPVAMPMAFLLPRYRRAVFVRMTGHVPWIIRHRQWLPSDGPHWTSLRALSANGGHCTVVRPVEAAVYSIETQPKVGIGQRCLLLQQPGEESVQVSRVRGDKRGDRDDLGRGGNVLWDCCAFLDKATVQAVTELGGIQKIVLSHPHFLGSCVTWSKVFGDAPIYMHASDKHWVTRKDESRNPPSSRYSFWEGEELQLSPSLKVVRLGGHFPSSSVLLWASAPQDDKAVLFTGDTILPVPHGRWCSFMYSFPNLLPLPDFVVESILKKVTALPAFDRLYGPFSSSSIQGNAKDAVLESAQRYLDSLAGKYHGK 729
            MGVRRTKTIFFVWLLHLSLAAFVVHAFVTNVAKPALRRLLPRCAAGVNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYDPDNVVGRFSDSACLHPERPTKAFFKAANGRPLKVFFNCNEFRNNHRTLPWIALVSWKKTLTYLFAAPVAMPMAFLLPRYRRAVFVRMTGHVPWIIRHRQWLPSDGPHWTSLRALSANGGHCTVVRPVEAAVYSIETQPKVGIGQRCLLLQQPGEESVQVSRVRGDKRGDRDDLGRGGNVLWDCCAFLDKATVQAVTELGGIQKIVLSHPHFLGSCVTWSKVFGDAPIYMHASDKHWVTRKDESRNPPSSRYSFWEGEELQLSPSLKVVRLGGHFPSSSVLLWASAPQDDKAVLFTGDTILPVPHGRWCSFMYSFPNLLPLPDFVVESILKKVTALPAFDRLYGPFSSSSIQGNAKDAVLESAQRYLDSLAGKYHGK
Sbjct:    1 MGVRRTKTIFFVWLLHLSLAAFVVHAFVTNVAKPALRRLLPRCAAGVNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYDPDNVVGRFSDSACLHPERPTKAFFKAANGRPLKVFFNCNEFRNNHRTLPWIALVSWKKTLTYLFAAPVAMPMAFLLPRYRRAVFVRMTGHVPWIIRHRQWLPSDGPHWTSLRALSANGGHCTVVRPVEAAVYSIETQPKVGIGQRCLLLQQPGEESVQVSRVRGDKRGDRDDLGRGGNVLWDCCAFLDKATVQAVTELGGIQKIVLSHPHFLGSCVTWSKVFGDAPIYMHASDKHWVTRKDESRNPPSSRYSFWEGEELQLSPSLKVVRLGGHFPSSSVLLWASAPQDDKAVLFTGDTILPVPHGRWCSFMYSFPNLLPLPDFVVESILKKVTALPAFDRLYGPFSSSSIQGNAKDAVLESAQRYLDSLAGKYHGK 729          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|654626475|ref|WP_028090714.1| (histone deacetylase [Dolichospermum circinale])

HSP 1 Score: 254.603 bits (649), Expect = 2.712e-75
Identity = 137/312 (43.91%), Postives = 181/312 (58.01%), Query Frame = 0
Query:   47 VNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGV-----RLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            + VIYS++FL+HK   YHPE P R++     LK          +L  P +SK   ++ I  VH   Y+ +VK ++  GGG +D DT V+  +YDV LLA +AW+D V+  L                         P+F L RPPGHHA++   MGFC+F+ AA+AA YAL + G ++VAILD D HHGNG +A V THP I Y S HQ  A+P TG D    G H N+L++PI   S +  Y PL ++ +LPFL  F PDLLIVS GYD   +DPLA + L P+DF+   +  L      KI+FGLEGGYD
Sbjct:    2 LQVIYSDQFLDHKTGIYHPEKPARLTAIVDALKTASFAEKITWKLPTPVISKPSLMSCIESVHSTTYINKVKNIAANGGGYLDRDTPVSPRSYDVALLAVSAWLDAVDIVL---------------------NTADPAFVLARPPGHHAVSDTGMGFCLFSNAAIAAFYALQQPGIKRVAILDWDVHHGNGTEAIVETHPQIAYISLHQYPAYPGTG-DASQQGLHNNVLNLPISPGSDITVYQPLWENHILPFLNNFSPDLLIVSAGYDANANDPLASVNLQPEDFSLFTEYCLSI--TRKIMFGLEGGYD 289          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|1210214312|dbj|BAZ33352.1| (histone deacetylase superfamily protein [Cylindrospermum sp. NIES-4074])

HSP 1 Score: 253.447 bits (646), Expect = 1.009e-74
Identity = 139/310 (44.84%), Postives = 183/310 (59.03%), Query Frame = 0
Query:   49 VIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVR----LYP-PAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            VIYSE FL+HK   +HPE P R+   A+ LK +        L P PA  +   L+ + K H   Y+ ++KA++  GGG +D DT V+  ++DV LLA +AW+D V+  L                         P+F L RPPGHHA +   MGFC+F+ AA+AA YAL++ G  +VAILD D HHGNG QA V+THP I Y S HQ   +P TG    + G H N+L++P+P  S +  Y PLL+ KV+PFL  F+PDLLIVS GYD   DDPLA + L P+DF    +  L+     KI+FGLEGGYD
Sbjct:    4 VIYSEEFLDHKTGKFHPEKPERLIAIAKGLKKSAFAEQIEWLAPTPAADRPTLLSCLAKAHTATYISKIKAIASSGGGYLDTDTPVSPRSHDVALLAVSAWLDGVDTVLTRA---------------------NPAFVLARPPGHHAESDTGMGFCLFSNAAIAALYALEQPGVNRVAILDWDVHHGNGTQAIVQTHPQIAYCSLHQYPCYPGTG-KASERGFHDNVLNLPVPPGSDIAVYQPLLEKKVVPFLANFQPDLLIVSAGYDANADDPLASINLQPKDFGLFTEHCLQL--TRKILFGLEGGYD 289          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|1096252209|ref|WP_071190205.1| (histone deacetylase [Trichormus sp. NMC-1])

HSP 1 Score: 252.292 bits (643), Expect = 2.019e-74
Identity = 135/310 (43.55%), Postives = 183/310 (59.03%), Query Frame = 0
Query:   47 VNVIYSERFLEHKARGYHPENPLRVSVPAQLLK---HTPGVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            + +IYS+ FLEHK   YHPE P R++   + LK    T  +    P  +K   ++ I KVH   Y+ ++K ++  GGG +D DT V+  +YD+ LLA +AW+D ++  L  E                      P+F L RPPGHHA +   MGFC+F+ AA+A+ YAL++ G  +VAILD D HHGNG QA V THP I Y S HQ  A+P TG    + G H N+L++PIP  S +  Y PL + K++PFL+ F+PDLLIVS GYD   DDPLA + L P+D+    +  L      KI+FGLEGGYD
Sbjct:    2 LQIIYSDEFLEHKTGRYHPEKPERLTAIVKALKAASFTEQIEWLSP-TTKPGQMSWIEKVHTARYINKLKEIAATGGGYLDGDTPVSPRSYDIALLAVSAWLDGIDAVLATE---------------------NPAFVLARPPGHHAESDAGMGFCLFSNAAIASVYALEKPGINRVAILDWDVHHGNGTQAIVETHPQIAYCSLHQYPAYPGTG-KASEKGFHNNVLNLPIPPGSDITEYQPLWESKIIPFLSNFQPDLLIVSAGYDANADDPLASMNLQPEDYGLFTEYCLGL--TRKILFGLEGGYD 286          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|654621059|ref|WP_028085517.1| (histone deacetylase [Dolichospermum circinale])

HSP 1 Score: 252.292 bits (643), Expect = 2.465e-74
Identity = 136/312 (43.59%), Postives = 179/312 (57.37%), Query Frame = 0
Query:   47 VNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGV-----RLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            + VIYS+ FL+HK   YHPE P R++     LK          +L  P +SK   ++ I  VH   Y+ +VK ++  GGG +D DT V+  +YDV LLA +AW+D V+  +                         P+F L RPPGHHA++   MGFC+F+ AA+AA YAL + G ++VAILD D HHGNG +A V THP I Y S HQ  A+P TG D    G H N+L++PI   S +  Y PL +  +LPFL  F PDLLIVS GYD   +DPLA + L P+DF+   +  L      KI+FGLEGGYD
Sbjct:    2 LQVIYSDEFLDHKTGIYHPEKPSRLTAIVDALKTASFAEKITWKLPTPVISKPSLMSWIESVHSTTYINKVKNIATNGGGYLDRDTPVSPRSYDVALLAVSAWLDAVDTVI---------------------NTADPAFVLARPPGHHAVSDTGMGFCLFSNAAIAAFYALQQPGIKRVAILDWDVHHGNGTEAIVATHPQIAYISLHQYPAYPGTG-DASQQGLHNNVLNLPISPGSDITVYQPLWEKHILPFLNNFSPDLLIVSAGYDANANDPLASVNLQPEDFSLFTEYCLSI--TRKIMFGLEGGYD 289          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|1056312662|ref|WP_067768040.1| (histone deacetylase [Nostoc sp. NIES-3756] >gi|953510446|dbj|BAT53134.1| Histone deacetylase superfamily protein [Nostoc sp. NIES-3756] >gi|1210120016|dbj|BAY39140.1| histone deacetylase superfamily protein [Nostoc sp. NIES-2111])

HSP 1 Score: 252.292 bits (643), Expect = 2.571e-74
Identity = 136/316 (43.04%), Postives = 181/316 (57.28%), Query Frame = 0
Query:   47 VNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGV-----RLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYDPDNV 357
            ++VIYS+ FL+HK   YHPE P R+    Q LK          R   PA+     + +++ VH   Y+ ++K ++  GGG +D DT V+  +YDV LLA +AW+D +   L  E                      P+F L RPPGHHA +   MGFC+F+ AA+AA YAL+  G  +VAI+D D HHGNG QA V T+P I Y S HQ   +P TG    + G H N+L++P+P  S +  Y PL + KV+PFLT F+PDLLIVS GYD   DDPLA + L PQD+    +  L      KI+FGLEGGYD D +
Sbjct:    2 LSVIYSDEFLDHKTGNYHPEKPERLKAIVQALKDAAFAEKIVWREPTPALENSSVMQLLVNVHSPGYINKIKEIATTGGGYLDGDTPVSPRSYDVALLAVSAWLDGINTVLTSE---------------------NPAFVLARPPGHHAESDAGMGFCLFSNAAIAAYYALEMQGINRVAIIDWDVHHGNGTQAIVETNPQIAYCSLHQYPCYPGTG-RATERGFHNNVLNLPVPPGSDISVYQPLWEKKVVPFLTEFQPDLLIVSAGYDANADDPLASVNLQPQDYGLFTNYCLGI--TRKILFGLEGGYDLDTL 293          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|1213732902|gb|OWY65622.1| (hypothetical protein B7486_40865 [cyanobacterium TDX16])

HSP 1 Score: 251.906 bits (642), Expect = 2.767e-74
Identity = 135/308 (43.83%), Postives = 183/308 (59.42%), Query Frame = 0
Query:   49 VIYSERFLEHKARGYHPENPLRVSVPAQLLKHTP---GVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            VIYS+ FLEHK   +HPE P R+S  A  L+HT     +    P    + A+A + KVH   +++ V+ LS +GGG +D DT V+  +YDV LLA  AW+D ++ TL                         P+F L+RPPGHHA + + MGFC+F+ AA+AA YAL++    +VAILD D HHGNG QA V  HP I + S HQ   +P TG    + G + N+L++P+P  S +  Y P+ + +V+PFLT F+PDLLIVS GYD    DPLA++ L PQD+    +  L+   R  IVFGLEGGYD
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHKLEWRSPVTDFQRAIAWLKKVHSPHHIQSVRELSTQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL---------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNINRVAILDWDVHHGNGTQAIVENHPQIAFCSLHQSPCYPGTGA-AAETGAYNNVLNLPLPPGSTIADYQPVFETQVMPFLTEFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYD 287          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|493032441|ref|WP_006101836.1| (histone deacetylase [Coleofasciculus chthonoplastes] >gi|196180023|gb|EDX75016.1| Histone deacetylase family, putative [Coleofasciculus chthonoplastes PCC 7420])

HSP 1 Score: 252.292 bits (643), Expect = 2.915e-74
Identity = 135/309 (43.69%), Postives = 177/309 (57.28%), Query Frame = 0
Query:   49 VIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVRL----YPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            VIYS+ FL H   G+HPE P R++     L   P         P  V     + ++ KVHD +Y+  VK L+  GGG +D DT V+  +YD+ LLA +AW+D V+R L                         P+F L RPPGHHA   + MGFC+F+ AA+AA YAL++ G +KVAILD D HHGNG Q+ V     I Y S HQ   +P TG  PR+ G + N+L++PIP+ S    Y P+ +  V+PFL  F+PDLLIVS GYD   DDPLA +AL P+DF    D  L+     +I+FGLEGGYD
Sbjct:    4 VIYSDEFLNHDNGGFHPERPERLTAIVNALNAAPWADQVDWQLPTPVESRPVMPLLQKVHDQDYINLVKQLAHEGGGMIDGDTRVSPRSYDIALLAISAWLDGVDRVLTS---------------------NNPAFVLARPPGHHAEGPRGMGFCLFSNAAIAAYYALEQAGIQKVAILDWDVHHGNGTQSLVENDARIVYCSLHQYPFYPGTG-HPRERGAYNNVLNIPIPSGSTFTQYQPMFEQGVIPFLNEFQPDLLIVSAGYDANADDPLASVALKPKDFGVFTDYCLQV--THRILFGLEGGYD 288          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|504967570|ref|WP_015154672.1| (histone deacetylase [Chroococcidiopsis thermalis] >gi|428009562|gb|AFY88125.1| histone deacetylase superfamily [Chroococcidiopsis thermalis PCC 7203])

HSP 1 Score: 251.521 bits (641), Expect = 3.914e-74
Identity = 135/308 (43.83%), Postives = 182/308 (59.09%), Query Frame = 0
Query:   49 VIYSERFLEHKARGYHPENPLRVSVPAQLLKHTP---GVRLYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYD 353
            VIYS+ FLEHK   +HPE P R+S  A  L+HT     +    P    + A+A + KVH   +++ V+ L+ +GGG +D DT V+  +YDV LLA  AW+D ++ TL                         P+F L+RPPGHHA + + MGFC+F+ AA+AA YAL++     VAILD D HHGNG QA V  HP I + S HQ   +P TG    + G H N+L++P+P  S +  Y P+ + +V+PFLT F+PDLLIVS GYD    DPLA++ L PQD+    +  L+   R  IVFGLEGGYD
Sbjct:    4 VIYSDEFLEHKTGRFHPEKPERISAIASALQHTSFAHQLEWRSPVTDPQRAIAWLEKVHSPHHIQSVRELATQGGGYLDLDTPVSPRSYDVALLAVNAWLDGIDYTL---------------------ATNNPAFVLSRPPGHHAESDRGMGFCLFSNAAIAAHYALEQPNINHVAILDWDVHHGNGTQAIVEHHPQIAFCSLHQSPCYPGTGA-AAETGAHNNVLNLPLPPGSTIADYQPVFETQVIPFLTQFQPDLLIVSAGYDANAADPLAEMYLQPQDYGLFTEFCLKITHR--IVFGLEGGYD 287          
BLAST of EWM27517.1 vs. NCBI_GenBank
Match: gi|1121317964|ref|WP_073628103.1| (histone deacetylase [Scytonema sp. HK-05] >gi|1115296952|gb|OKH59941.1| hypothetical protein NIES2130_05615 [Scytonema sp. HK-05] >gi|1210123493|dbj|BAY42607.1| histone deacetylase superfamily protein [Scytonema sp. HK-05])

HSP 1 Score: 251.521 bits (641), Expect = 4.256e-74
Identity = 137/313 (43.77%), Postives = 183/313 (58.47%), Query Frame = 0
Query:   47 VNVIYSERFLEHKARGYHPENPLRVSVPAQLLKHTPGVR----LYPPAVSKEEALAVILKVHDVEYVEEVKALSERGGGSMDADTYVNSATYDVCLLAAAAWMDCVERTLLGEMEEVPGENGDNLTLRVHNGIRRPSFALTRPPGHHALAGQAMGFCIFNFAAVAACYALDRLGCRKVAILDLDAHHGNGHQAFVRTHPSICYASFHQKDAFPMTGLDPRDYGPHGNLLDVPIPAYSGLGTYLPLLDDKVLPFLTAFEPDLLIVSIGYDCLVDDPLAQLALGPQDFTAVGDRLLRAFGREKIVFGLEGGYDPD 355
            ++VIYSE FL+HK   +HPE P R++  A  LK     +      P    K   ++V+ + H   Y+++V+ ++  GGGS+D DT V+  +YDV LLA +AW+D V+  L                     G  +P+F L RPPGHHA +   MGFC+F+ AA+AA YAL + G  +VAILD D HHGNG QA V  HP I Y S HQ   +P TG    + G H N+L++P P  S +G Y P+ + KV+PF++ F+PDLLIVS GYD   DDPLA + L PQD+    D  L      KI+FGLEGGYD D
Sbjct:    2 LSVIYSEEFLDHKTGSFHPEKPERLTAIATALKQAAFAQHIEWRLPTPPEKRPLMSVLSQAHTQRYIKKVQEIALAGGGSLDGDTPVSRRSYDVALLAVSAWLDGVDTVL---------------------GTGKPAFVLARPPGHHAESDAGMGFCLFSNAAIAALYALQQPGIHRVAILDWDVHHGNGTQAIVENHPQIAYCSLHQYPCYPGTG-HYTERGFHNNVLNLPFPPGSDIGIYQPVFETKVVPFISNFQPDLLIVSAGYDANADDPLASINLQPQDYGLFTDYCLGI--TRKILFGLEGGYDFD 290          
The following BLAST results are available for this feature:
BLAST of EWM27517.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109783|gb|EWM27517.1|0.000e+0100.00histone deacetylase superfamily [Nannochloropsis g... [more]
gi|654626475|ref|WP_028090714.1|2.712e-7543.91histone deacetylase [Dolichospermum circinale][more]
gi|1210214312|dbj|BAZ33352.1|1.009e-7444.84histone deacetylase superfamily protein [Cylindros... [more]
gi|1096252209|ref|WP_071190205.1|2.019e-7443.55histone deacetylase [Trichormus sp. NMC-1][more]
gi|654621059|ref|WP_028085517.1|2.465e-7443.59histone deacetylase [Dolichospermum circinale][more]
gi|1056312662|ref|WP_067768040.1|2.571e-7443.04histone deacetylase [Nostoc sp. NIES-3756] >gi|953... [more]
gi|1213732902|gb|OWY65622.1|2.767e-7443.83hypothetical protein B7486_40865 [cyanobacterium T... [more]
gi|493032441|ref|WP_006101836.1|2.915e-7443.69histone deacetylase [Coleofasciculus chthonoplaste... [more]
gi|504967570|ref|WP_015154672.1|3.914e-7443.83histone deacetylase [Chroococcidiopsis thermalis] ... [more]
gi|1121317964|ref|WP_073628103.1|4.256e-7443.77histone deacetylase [Scytonema sp. HK-05] >gi|1115... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3170rna3170Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications