EWM27518.1, cds3154 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|585109784|gb|EWM27518.1| (cupin 4 family protein [Nannochloropsis gaditana]) HSP 1 Score: 1162.13 bits (3005), Expect = 0.000e+0 Identity = 563/563 (100.00%), Postives = 563/563 (100.00%), Query Frame = 0 Query: 1 MVQFQLLFVWLALSFGAGEHQPRPPSTTTDNTVLSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRDLHSTWSNVSALQCSRGPAGENAIDDSPNLPFENVSQVFSSVVTPKIEDCNGATLRQGDLIALVLMQVAMQERALRRPVPLKNLMKRNGKYKRLTHLTDVVSLLKEQGDVRGAWDAFIRERKSVPRNLEVFGKSDSKDRPAHGEEMKNRLLGAAAAWSDIEIPDEIQDDFLKALDCLQGALSDSVQTKAIFSHFEHVCQRDLVQRQEQRELLLEAGVWQADINAVDGKLQASQIYGVGSQTPTDFSRQ 563 MVQFQLLFVWLALSFGAGEHQPRPPSTTTDNTVLSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRDLHSTWSNVSALQCSRGPAGENAIDDSPNLPFENVSQVFSSVVTPKIEDCNGATLRQGDLIALVLMQVAMQERALRRPVPLKNLMKRNGKYKRLTHLTDVVSLLKEQGDVRGAWDAFIRERKSVPRNLEVFGKSDSKDRPAHGEEMKNRLLGAAAAWSDIEIPDEIQDDFLKALDCLQGALSDSVQTKAIFSHFEHVCQRDLVQRQEQRELLLEAGVWQADINAVDGKLQASQIYGVGSQTPTDFSRQ Sbjct: 1 MVQFQLLFVWLALSFGAGEHQPRPPSTTTDNTVLSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRDLHSTWSNVSALQCSRGPAGENAIDDSPNLPFENVSQVFSSVVTPKIEDCNGATLRQGDLIALVLMQVAMQERALRRPVPLKNLMKRNGKYKRLTHLTDVVSLLKEQGDVRGAWDAFIRERKSVPRNLEVFGKSDSKDRPAHGEEMKNRLLGAAAAWSDIEIPDEIQDDFLKALDCLQGALSDSVQTKAIFSHFEHVCQRDLVQRQEQRELLLEAGVWQADINAVDGKLQASQIYGVGSQTPTDFSRQ 563
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|553191039|ref|XP_005855312.1| (cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526] >gi|553193016|ref|XP_005855693.1| cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293369|gb|EKU20669.1| cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293749|gb|EKU21049.1| cupin 4 family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 242.276 bits (617), Expect = 1.111e-74 Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 216 EGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRDLHSTWSNVSALQCSRGPAG 335 EGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGL NSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRD+HS WSNVSALQCSRGPAG Sbjct: 1 EGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLENSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRDVHSAWSNVSALQCSRGPAG 120
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|298713801|emb|CBJ27173.1| (mina protein [Ectocarpus siliculosus]) HSP 1 Score: 163.31 bits (412), Expect = 1.277e-39 Identity = 105/302 (34.77%), Postives = 154/302 (50.99%), Query Frame = 0 Query: 24 PPSTTTDNTVLSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMR--QSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRI--KGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRG-YSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNEN-----DGGLGNS---------SLHLTVGIETTVLGSWESLLLEVLTV 306 PP T T++ ++ P ++ F FW+ KP VIR +P + ++ D+++++ + + S EP ++ W ++KR+ + DG + PA + G D E A AF RG +S+VIN ++ + G R + A E LG + N Y TPP SQ FEAHFDWMD ++Q+ GSK W LY +V PRPD++FKP ++GEP L PGD++Y+P G HEA GG G S SLH+T G+ET + G++ESLL L V Sbjct: 45 PPVPETSVTLVRELMDPFSLQD-FAETFWERKPMVIRGRSPNHYDRLVEFGLGDVESVIEKGVSLSG----EGEEPMVLGSD-------WNIIKRVFVQADDGPGSNVPPAPG--KTHAGGADRVVSLEEARKAFHRGGFSVVINRLQRRWRGVLRASRALEHVLGQPVNANLYMTPPQSQGFEAHFDWMDGIVVQLTGSKTWILYHEMVTMPRPDLKFKPKAAELGEPIAVLDLYPGDMMYIPRGWPHEAAVNGTAARPGGGRGASPSSSTARGPSLHVTFGVETALSGTYESLLHHALEV 332
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|551669880|ref|XP_005837698.1| (hypothetical protein GUITHDRAFT_161698 [Guillardia theta CCMP2712] >gi|428181856|gb|EKX50718.1| hypothetical protein GUITHDRAFT_161698 [Guillardia theta CCMP2712]) HSP 1 Score: 145.206 bits (365), Expect = 3.504e-34 Identity = 98/312 (31.41%), Postives = 148/312 (47.44%), Query Frame = 0 Query: 3 QFQLLFVWLALSFGAGEHQPRPPSTTTDNTVLSSMLGPTPGKELFFRDFWQIKPA------VIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSS--SEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGE-PYIDFVLEPGDLLYLPSGTIHEALNENDGGL-----GNSSLHLTVGIETTVLGSWESLL 300 QF L+ + L+ + + + + +L P + F RDF + PA +I R++ +F I + S+A ++ S D + + + LVK++KG DGE+WS ++ DD RG++LVINN + + G A E LGY +N YFTPP SQ FE HFD M+ +LQ+EGSK W +Y+ ++ PRP+ +FKP +I F L PG +LP G +HEA + N L ++SLHLTVGI+ + +WES+L Sbjct: 9 QFHLIALILSCIYLMRTGRCSEQCHESVKEIFEVILSPNSTRSFFVRDFENMMPASEQQVVMIARNSRNYFNDI----------INISSAQIMETFDDCLSVHSQDAMDEMISGEDYHLVKKVKGKDGEFWSGRVPGRTHKK-----DDVIKW------MKRGFTLVINNADMRYPGLVGAAQRMEDALGYAVQMNLYFTPPSSQGFEVHFDPMNTLVLQLEGSKTWEVYNPIIALPRPEQKFKPKHKEIHHGSRQTFTLTPGSTFFLPRGWLHEA-HTNSSSLPPRSRASASLHLTVGIDAQYV-TWESVL 297
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|1178424204|ref|WP_082946788.1| (hypothetical protein [Mycobacterium sp. ACS4054]) HSP 1 Score: 134.035 bits (336), Expect = 9.883e-31 Identity = 93/274 (33.94%), Postives = 137/274 (50.00%), Query Frame = 0 Query: 34 LSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHD-IGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTV 306 L ++L P G FF ++W+ +P + R++P+F+ + +D+D+ L + S S + HDAES + ++ + W TP I+ L D A++ GY+++IN ++ + + L+ E L + ++N YFTP SQ F HFD D FILQ+ G KRWRLYD + +P L D IG P + +L PGD+LY+P G IHEAL+ N SSLHLTVG+ W LL E L V Sbjct: 7 LETLLSPL-GLARFFGEYWEKRPYLGVRNSPSFYSGLFSVADMDSALQLTCIHS------SGDDVALVKAHDAESSTRSVPRA--------WDGTP------DIYALYD----------AYNSGYTIIINRLQARWGTIAILSRRLEESLRHPVNVNLYFTPRHSQGFSPHFDDHDVFILQLAGEKRWRLYDFQSDALPLAAADRPVLKDEIGPPRDEHLLSPGDVLYIPRGHIHEALSTN-----GSSLHLTVGVNVF---RWVDLLQEALRV 241
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|1113491992|gb|OJX52893.1| (hypothetical protein BGO88_13855 [Flavobacterium sp. 38-13]) HSP 1 Score: 129.413 bits (324), Expect = 5.028e-29 Identity = 76/262 (29.01%), Postives = 130/262 (49.62%), Query Frame = 0 Query: 45 ELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTAS-MLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLT 305 E FF +++ + +I+R++ +F+ ++ LD ++ SS + +S S+ K D A K V+G + D+ + GY+LV+++I++K+ L LG+RT N Y TP SQ F AH+D D F+LQ+ G+K+WR+YD E P +M+F + D G +F+LE GD+LY+P G +H+A ++D SS+H+T+G+ SW ++ E ++ Sbjct: 31 EDFFSKYFEKQYLLIKRNDKDYFKDVLNVDSLDQLIFSSSNYYPTFKAVSHSKGKLDPA------------KYCTNVNGGY-------------------VIDSSQFVKCYQEGYTLVLSDIQNKILSLRNLTNDVTKALGHRTGTNIYITPKDSQGFPAHYDTHDVFVLQISGTKKWRIYDVFEELPNGEMKFDNNFSDTGNVLDEFLLEEGDMLYIPRGMVHDANCDDD-----SSIHITLGLFGK---SWGEIISEYIS 253
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|1181367133|ref|WP_084667936.1| (hypothetical protein [Nioella nitratireducens]) HSP 1 Score: 127.872 bits (320), Expect = 1.379e-28 Identity = 81/265 (30.57%), Postives = 125/265 (47.17%), Query Frame = 0 Query: 44 KELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLS 308 ++ FF D ++ K VIRR P ++ ++ +D+D A GLS+ E QA+ D I D F + TD F G +++++N++++L + A E R N Y TP SQ F+AH+D D +LQVEG+K WR+YD V P + F P IGE FVLEPGD++Y+P G H+A++ + +SLH+T G+ T SW +++E + L+ Sbjct: 14 RDAFFADSFEKKHLVIRRGQPDYYSSLLSTADIDW-------AVTTLGLSTPEVNVVQADRD-----------ITAAD----------------FAYESGFTDPLSVSKLFDEGATIIMSNLQERLPKLAEFCRALEKVFSARVQTNIYLTPAHSQGFKAHYDGHDVLVLQVEGTKEWRIYDTPVHLPLQEQGFNPHDVPIGEETDRFVLEPGDMVYVPRGLTHDAVSTD-----QTSLHITTGLMTR---SWADVMVEAVRKLA 236
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|1176632976|ref|WP_082459957.1| (MULTISPECIES: hypothetical protein [Mycobacterium]) HSP 1 Score: 127.872 bits (320), Expect = 1.745e-28 Identity = 94/284 (33.10%), Postives = 135/284 (47.54%), Query Frame = 0 Query: 34 LSSMLGPTPGKELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHD-IGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSGGSAEDRD 316 L+++L P FF W+ +P V R+ PTF+ + +D+DA L + S S + HD ES + L + W TP AL + A++ GY+++IN ++ + + L + E L + +IN YFTP SQ F HFD D FILQ+ G KRW LYD + +P L D IG+P + +LE GD+LY+P G IHEAL+ + SSLHLTVG+ W LL E L V + + R+ Sbjct: 7 LATILSPL-DPAAFFSAHWEKRPYVGVRNAPTFYSGLFSVADIDAALQLTCIHS------SGDDVALVKAHDGESSTLPLPRA--------WDGTPDIYAL----------------YNAYNSGYTIIINRLQARWGPIAILCRSLEESLRHPVNINLYFTPRHSQGFSPHFDDHDVFILQLAGEKRWLLYDFQSKALPLATADRPVLKDEIGQPREEILLESGDVLYIPRGHIHEALSTS-----GSSLHLTVGVNVF---RWVDLLEEALRVAAAENVRLRE 251
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|644416044|ref|WP_025311170.1| (hypothetical protein [Roseibacterium elongatum] >gi|594548270|gb|AHM03289.1| hypothetical protein roselon_00879 [Roseibacterium elongatum DSM 19469]) HSP 1 Score: 125.176 bits (313), Expect = 1.215e-27 Identity = 74/265 (27.92%), Postives = 127/265 (47.92%), Query Frame = 0 Query: 44 KELFFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGEPYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLS 308 ++ FF D+++ KP V+RR++P +++ ++ D+D ++ GL E +A + TP + F + D + F+ G +++++ + ++L +R A E + R N Y T +Q F+AH+D D +LQ+EG+K WR+YD V+ P F P +IGE F+L PGD+LY+P G H+A+ G SLH+T G+ +L +W L+ E + VL+ Sbjct: 17 RDTFFTDYFEKKPMVVRRNDPDYYKALLSYEDIDRVITTM-------GLHHPEINVTKA---------------------GGTITP------EDFAYESGMIDPVRVNQLFADGATVILSGLHERLPKLARYCRALEAVMSCRVQTNIYMTQAQTQGFKAHYDNHDVVVLQIEGTKEWRIYDTPVDLPLNSQAFNPHDVEIGEETDRFLLHPGDMLYVPRGLAHDAV-----ATGEPSLHITTGL---MLRTWADLMAEAVHVLA 239
BLAST of EWM27518.1 vs. NCBI_GenBank
Match: gi|1160843386|ref|WP_079688961.1| (hypothetical protein [Ohtaekwangia koreensis] >gi|1154452457|emb|SKC83357.1| Cupin superfamily protein [Ohtaekwangia koreensis]) HSP 1 Score: 121.709 bits (304), Expect = 5.019e-27 Identity = 82/266 (30.83%), Postives = 135/266 (50.75%), Query Frame = 0 Query: 47 FFRDFWQIKPAVIRRHNPTFFQPIMRQSDLDAILVQSSTASMLRGLSSSEPKCDQAEHDAESKSWTLVKRIKGVDGEWWSSTPATAALRQIFGLDDDSTDAEVAHAAFSRGYSLVINNIEDKLYGTSRLALAFEGELGYRTSINCYFTPPGSQAFEAHFDWMDAFILQVEGSKRWRLYDALVEQPRPDMQFKPSLHDIGE---PYIDFVLEPGDLLYLPSGTIHEALNENDGGLGNSSLHLTVGIETTVLGSWESLLLEVLTVLSG 309 FF+++ + KP VIRR + +FQ I+ D+D I+ S + L S + + A+ K + + R++ V+ + S TA + ++F G +++I I + +RL+ A + + N Y +P SQ FEAH+D D FILQV GSKRW++Y+ V P + +PS+ GE P ++ L+ GDL+Y+P G +HEA+ + S H+T+GI T +W L+L+ +T L+G Sbjct: 19 FFQNYLERKPLVIRRGDTRYFQDILTLDDIDFIV------SRMHALGSYDVRMAAADKVIFEKQYASMSRVQNVEVK---SHLNTAKVLELFT---------------KHGATIIIEQISNVWPSIARLSDAVNESMSCSSGANIYISPAESQGFEAHYDTHDVFILQVHGSKRWKIYENPVYLP---LGSQPSIPYSGEQAVPSVELDLQAGDLIYMPRGFVHEAMTNQE-----ISAHITLGIYGT---TWTRLILDSITKLAG 249 The following BLAST results are available for this feature:
BLAST of EWM27518.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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