EWM27551.1, cds3126 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|585109818|gb|EWM27551.1| (ubiquitin carboxyl-terminal hydrolase 4 [Nannochloropsis gaditana]) HSP 1 Score: 2708.32 bits (7019), Expect = 0.000e+0 Identity = 1311/1311 (100.00%), Postives = 1311/1311 (100.00%), Query Frame = 0
Query: 1 MNHARAAFESGGEGYNASAGTEKFEKELRPAPPGGAPSPPPVAEQRRRVRSAIEETQALRVGDTWYPIASSWWQRWKRYVEYDGEDSTSGGHQALHPGRIDNTDLVHKDRKRRWCERNESVHKPAGCEEEDETREGFEKVLELRKGVLQNVDFALLPATAYKLLKEWYSGGPDLPRSVITIGRGSVAENRVSLFPYVVEVTSGDSTYDCGTARERHCGQMVVESATPASQFVQDVCQLVGIDIKFAELYSVPMVGQDVEAESTEEAEGGKEPMGPCKHPPNERVLGSFNTLDLIGCASKGSKTSHGNKLDVPSDRDGADELVRPQIPAKTSSSADSHNGAVPEMRHISKMYSKEQTVEDIFYGETAACVFVETLAWRFALKKGDALDAHDRERWFDSVVVERLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWRQFYVGMPVELRHHNLWFQATVTQVDEEERKILVRRKSGEVSEVWKAFASEDVCRPGVHLPEAAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAKNLCAAYACRDPRAASPGRSKHEILAEEEEEEDGLPYKSRLPDERKHMGEGLSMSLREEKGEEVGLGGQFPFAISLADVLDRRIVGEFKDTDRVDELARTTVTLHAFQLQHAPAAPPPPRASTNSWLSGKREASPSPPRLCGRKSPAPAPGLVRKEDFRKGEEVFVVATCVFGRARPTTTFAFASKTYERFGPLLRFTLSSLQATTRDVHARVWAATERFLREEADAEAMEEEEEKEGRREEERAAVARRLPYRLYLAKAAGDVVGEEVLDDGSPFDVQALKGRVLMAAFEASMFEKWVVKEEADRTDPHASVQRHRLDGRTGEERARKPIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRRRGSLKWAGARLPSS 1311
MNHARAAFESGGEGYNASAGTEKFEKELRPAPPGGAPSPPPVAEQRRRVRSAIEETQALRVGDTWYPIASSWWQRWKRYVEYDGEDSTSGGHQALHPGRIDNTDLVHKDRKRRWCERNESVHKPAGCEEEDETREGFEKVLELRKGVLQNVDFALLPATAYKLLKEWYSGGPDLPRSVITIGRGSVAENRVSLFPYVVEVTSGDSTYDCGTARERHCGQMVVESATPASQFVQDVCQLVGIDIKFAELYSVPMVGQDVEAESTEEAEGGKEPMGPCKHPPNERVLGSFNTLDLIGCASKGSKTSHGNKLDVPSDRDGADELVRPQIPAKTSSSADSHNGAVPEMRHISKMYSKEQTVEDIFYGETAACVFVETLAWRFALKKGDALDAHDRERWFDSVVVERLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWRQFYVGMPVELRHHNLWFQATVTQVDEEERKILVRRKSGEVSEVWKAFASEDVCRPGVHLPEAAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAKNLCAAYACRDPRAASPGRSKHEILAEEEEEEDGLPYKSRLPDERKHMGEGLSMSLREEKGEEVGLGGQFPFAISLADVLDRRIVGEFKDTDRVDELARTTVTLHAFQLQHAPAAPPPPRASTNSWLSGKREASPSPPRLCGRKSPAPAPGLVRKEDFRKGEEVFVVATCVFGRARPTTTFAFASKTYERFGPLLRFTLSSLQATTRDVHARVWAATERFLREEADAEAMEEEEEKEGRREEERAAVARRLPYRLYLAKAAGDVVGEEVLDDGSPFDVQALKGRVLMAAFEASMFEKWVVKEEADRTDPHASVQRHRLDGRTGEERARKPIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRRRGSLKWAGARLPSS
Sbjct: 1 MNHARAAFESGGEGYNASAGTEKFEKELRPAPPGGAPSPPPVAEQRRRVRSAIEETQALRVGDTWYPIASSWWQRWKRYVEYDGEDSTSGGHQALHPGRIDNTDLVHKDRKRRWCERNESVHKPAGCEEEDETREGFEKVLELRKGVLQNVDFALLPATAYKLLKEWYSGGPDLPRSVITIGRGSVAENRVSLFPYVVEVTSGDSTYDCGTARERHCGQMVVESATPASQFVQDVCQLVGIDIKFAELYSVPMVGQDVEAESTEEAEGGKEPMGPCKHPPNERVLGSFNTLDLIGCASKGSKTSHGNKLDVPSDRDGADELVRPQIPAKTSSSADSHNGAVPEMRHISKMYSKEQTVEDIFYGETAACVFVETLAWRFALKKGDALDAHDRERWFDSVVVERLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWRQFYVGMPVELRHHNLWFQATVTQVDEEERKILVRRKSGEVSEVWKAFASEDVCRPGVHLPEAAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAKNLCAAYACRDPRAASPGRSKHEILAEEEEEEDGLPYKSRLPDERKHMGEGLSMSLREEKGEEVGLGGQFPFAISLADVLDRRIVGEFKDTDRVDELARTTVTLHAFQLQHAPAAPPPPRASTNSWLSGKREASPSPPRLCGRKSPAPAPGLVRKEDFRKGEEVFVVATCVFGRARPTTTFAFASKTYERFGPLLRFTLSSLQATTRDVHARVWAATERFLREEADAEAMEEEEEKEGRREEERAAVARRLPYRLYLAKAAGDVVGEEVLDDGSPFDVQALKGRVLMAAFEASMFEKWVVKEEADRTDPHASVQRHRLDGRTGEERARKPIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRRRGSLKWAGARLPSS 1311
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|298712288|emb|CBJ26739.1| (similar to ubiquitin specific peptidase 15 [Ectocarpus siliculosus]) HSP 1 Score: 315.849 bits (808), Expect = 3.382e-85 Identity = 184/456 (40.35%), Postives = 245/456 (53.73%), Query Frame = 0
Query: 374 LAWRFALKKGDALDAHDRER-WFDSVVVERLETNGQGVP-RVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWRQ-FYVGMPVEL----RHHNLWFQATVTQVDEE--ERKILVRRKSGEVSEVWKAFASEDVCRPGVHLPEAAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPG-----------SGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAK 809
L WR LK GD +DA D ++ WF+S V E + G P +V++HF W ++WD + +S AL LHT + WRQ V E+ W++ATV +V E +R + + +V W SED+C+ H+ +A P +R +PS RV V G +P+ + G + T+ + G VGLSNLGNTCFMNSMLQCL T L+ +F S + ++NEDNPLG G +A YA L D WSG ++ + P K+V+SQYAP FAGYQQHD+ ELM+FLLDG+HEDLNRV +KPYM D AG D A E W R+L RNDSV++D C G +SH+TCP C S+TFDPY SL+LPLP + + V FH P G RP+ VA +L T +LK I +
Sbjct: 326 LRWRLNLKAGDLIDARDSDKNWFESRVTE---VDVDGDPEQVKVHFLGWSEKWDEVLKRSSEALQKLHTFTTPWRQDLQVNSKCEVSSCRNEVKKWYEATVGEVKHEHGKRLLYIEVSDNDVGSQWMPEDSEDICKAHTHINKALP-------------ARTHKYATLTPSRIIFCPLKWCRVTNPHVCHGPPQYPHPAVSGRSRSGSGSGTGGSYGFYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRSQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGS-RPMEVAVTLQKDNTVRDLKTAICQ 764 HSP 2 Score: 189.504 bits (480), Expect = 6.455e-45 Identity = 111/272 (40.81%), Postives = 160/272 (58.82%), Query Frame = 0
Query: 1055 VARRLPYRLYLAKAAGDV------VGEEVLDDGSPFD-VQALKGRVLMAAFEASMFEKWVVKEEADR--TDPHASVQRHRLDG-------RTGEE--RARKPIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDM-RDVMR--GHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRRRGSLKWAG 1305
V LPY++++ +G +G EV + PF+ V A +G + + S K ++ DR +PH+ V + L+ R EE R+ + + C EKF+E E+L +++ WYC +CK H A KK+DV+S PDVLI+ LKRF + G + R+K++ V FP+EGLD+ R++ R G + ++APP+YDL+AVSEHSG L GHYTA+A+N D +WY+FNDS VSP S S YVLFY+RR G L+WAG
Sbjct: 1087 VVDALPYKVFVTDYSGSTTSATKGIGAEVPMNDEPFEAVSAYRGYSTRGSGDESTALKVQFPQDGDRPTYEPHSLVDKDELEATDTHPSVRKAEEAQNERQSVPIDSCFEKFTECEELGQSELWYCSRCKTHRQASKKLDVYSAPDVLIVVLKRFLFTPGALT-VYRQKLDTHVSFPIEGLDLTRNIQRAGGPIFKEAPPVYDLFAVSEHSGSLRAGHYTAIAQNSEDKKWYSFNDSHVSPTTPDKGPS----SEPYVLFYRRRSGVLRWAG 1353
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|698794594|ref|XP_009830326.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574114915|gb|ETV80402.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 294.278 bits (752), Expect = 1.185e-79 Identity = 225/688 (32.70%), Postives = 321/688 (46.66%), Query Frame = 0
Query: 143 LRKGVLQNVDFALLPATAYKLLKEWYSGGPDLPRSVITIGRGSVAENRVSLFPYVVEVT--SGDSTYDCGTARERHCGQMVVESATPASQFVQDVCQLVGIDIKFAELY-----SVPMVGQD------------VEAESTEEAEG----GKEPMGPCKHPPNERVLGSFNTLDLIGCASKGSKTSHGNKLDVPSDRDGADELVRPQIPAKTSSSA-DSHNGAVPEMRHISKMYSKEQTVEDIFYGETAACVFVETLAWRFALKKGDALDAHDR-ERWFDSVVVERLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWRQ-FYVGMPVELRH------HNLWFQATVTQVDEEERKILVRRKSGEVSEVW-----KAFASEDVCRPGVHLPEAAPRSAPSADASP----APGSRPSSSTAPSPSASSAFGAG---TGRVLGTGVAVGERASG--NPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEG------QINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFH 778
LR+G+++ DF LL ++ K ++PR VI GRGS AE V L+P +VEV + T ++ ++ SAT ++++ I ++ EL+ S ++G V +S E + + PM P P +R +GS N + SD D A + + P S+ A D NG + Y E VE L WR L+ GD +DA D W++SVV++ +V++H+ W D+W+ S L LH+++ +WR G PVE W +ATV V +V +VW ++ + R V S DAS AP T + A+ A + +G R + PS +GY T ++ GVVGL NLGNTCF+NS+LQCLS++ L D+F ++G +IN NPLG G +A+ YAKL++ MWSG + P++ K VI +YAP FAGY QHDSQE+++F+LDG+HEDLNRV +KPY ++AG PDA A E WA +L RNDSVV+DHC Q +SH+TCP C +ESITFDPYMSL+LP+P + V T H
Sbjct: 34 LRQGLVEGRDFQLLERLEWEKWKADNDRAVEIPRQVIARGRGSHAEKVVELYPLLVEVHFWANGMTASAPVQMKKGVNLHILLSATLDVSSIKNLL-WSRISSRYHELFPEYARSTDILGYKAVNDGNWARHIRVCTKSRREDDSWQTLDESPMTPDDDVPRQRTVGSLN---------------------LTSDVD-ASCVFLVECPFINSTDARDPRNG---------EYYMSE----------------VEDLGWRPMLQVGDYVDAKDTGNNWYESVVID------VKPEKVKVHYLTWGDKWNVWLSRDSSKLERLHSRADEWRSTLGKGAPVEFSTAATTGIRGSWVEATVVDVQ------VVEGDDEGTDDVWPRPPPRSLYTGKTIRVKVQFTSGGLPHTKSLDASSELLSAPNVHIRRQTTAAVVATDIVKADCPQSNYSYSSGTYTTNRNTSWSTPSS---SGYHSTKYT-AKAEFQGVVGLHNLGNTCFLNSVLQCLSNSKPLLDYFFQTDNDGGRVYMREINPRNPLGMGGKIAKAYAKLMEKMWSGESKVVTPSDLKYVIGEYAPAFAGYAQHDSQEVLSFILDGIHEDLNRVLEKPYTKPIEHAGRPDADVAKEEWANYLLRNDSVVVDHCMAQLRSHVTCPSCQNESITFDPYMSLSLPVP--NQAWVLLTLH 655
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|698794592|ref|XP_009830325.1| (hypothetical protein H257_06708 [Aphanomyces astaci] >gi|574114914|gb|ETV80401.1| hypothetical protein H257_06708 [Aphanomyces astaci]) HSP 1 Score: 294.278 bits (752), Expect = 5.353e-79 Identity = 225/688 (32.70%), Postives = 321/688 (46.66%), Query Frame = 0
Query: 143 LRKGVLQNVDFALLPATAYKLLKEWYSGGPDLPRSVITIGRGSVAENRVSLFPYVVEVT--SGDSTYDCGTARERHCGQMVVESATPASQFVQDVCQLVGIDIKFAELY-----SVPMVGQD------------VEAESTEEAEG----GKEPMGPCKHPPNERVLGSFNTLDLIGCASKGSKTSHGNKLDVPSDRDGADELVRPQIPAKTSSSA-DSHNGAVPEMRHISKMYSKEQTVEDIFYGETAACVFVETLAWRFALKKGDALDAHDR-ERWFDSVVVERLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWRQ-FYVGMPVELRH------HNLWFQATVTQVDEEERKILVRRKSGEVSEVW-----KAFASEDVCRPGVHLPEAAPRSAPSADASP----APGSRPSSSTAPSPSASSAFGAG---TGRVLGTGVAVGERASG--NPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEG------QINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFH 778
LR+G+++ DF LL ++ K ++PR VI GRGS AE V L+P +VEV + T ++ ++ SAT ++++ I ++ EL+ S ++G V +S E + + PM P P +R +GS N + SD D A + + P S+ A D NG + Y E VE L WR L+ GD +DA D W++SVV++ +V++H+ W D+W+ S L LH+++ +WR G PVE W +ATV V +V +VW ++ + R V S DAS AP T + A+ A + +G R + PS +GY T ++ GVVGL NLGNTCF+NS+LQCLS++ L D+F ++G +IN NPLG G +A+ YAKL++ MWSG + P++ K VI +YAP FAGY QHDSQE+++F+LDG+HEDLNRV +KPY ++AG PDA A E WA +L RNDSVV+DHC Q +SH+TCP C +ESITFDPYMSL+LP+P + V T H
Sbjct: 34 LRQGLVEGRDFQLLERLEWEKWKADNDRAVEIPRQVIARGRGSHAEKVVELYPLLVEVHFWANGMTASAPVQMKKGVNLHILLSATLDVSSIKNLL-WSRISSRYHELFPEYARSTDILGYKAVNDGNWARHIRVCTKSRREDDSWQTLDESPMTPDDDVPRQRTVGSLN---------------------LTSDVD-ASCVFLVECPFINSTDARDPRNG---------EYYMSE----------------VEDLGWRPMLQVGDYVDAKDTGNNWYESVVID------VKPEKVKVHYLTWGDKWNVWLSRDSSKLERLHSRADEWRSTLGKGAPVEFSTAATTGIRGSWVEATVVDVQ------VVEGDDEGTDDVWPRPPPRSLYTGKTIRVKVQFTSGGLPHTKSLDASSELLSAPNVHIRRQTTAAVVATDIVKADCPQSNYSYSSGTYTTNRNTSWSTPSS---SGYHSTKYT-AKAEFQGVVGLHNLGNTCFLNSVLQCLSNSKPLLDYFFQTDNDGGRVYMREINPRNPLGMGGKIAKAYAKLMEKMWSGESKVVTPSDLKYVIGEYAPAFAGYAQHDSQEVLSFILDGIHEDLNRVLEKPYTKPIEHAGRPDADVAKEEWANYLLRNDSVVVDHCMAQLRSHVTCPSCQNESITFDPYMSLSLPVP--NQAWVLLTLH 655 HSP 2 Score: 200.675 bits (509), Expect = 1.320e-48 Identity = 98/173 (56.65%), Postives = 118/173 (68.21%), Query Frame = 0
Query: 1125 RLDGRTGEERARKPIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRR 1297
RL + A + L+ C+ KF+E+EQL E D WYCPKCK HV AFKK D++SLP++L+LHLKRF Y QG YS R+KI LV FPV GLDM D + G++ D +YDLYAVSEH GGLGGGHYTA A N R+H+WY+FNDS S D +TS AYVLFY RR
Sbjct: 911 RLHVSADSKPASSSLDLRTCIAKFTEKEQLGENDTWYCPKCKAHVRAFKKFDLFSLPNILLLHLKRFRYAQGSYSM-QRDKINTLVTFPVSGLDMADFVVGNIPPDTSTVYDLYAVSEHMGGLGGGHYTAKAMNPRNHKWYSFNDSSTSDTTADDA----ITSHAYVLFYLRR 1078
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|673014354|ref|XP_008861138.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574482736|gb|ETW09727.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 279.256 bits (713), Expect = 5.475e-74 Identity = 175/485 (36.08%), Postives = 244/485 (50.31%), Query Frame = 0
Query: 371 VETLAWRFALKKGDALDAHD-RERWFDSVVVE-RLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWR---------QFYVGMPVELRHHNLWFQATVTQVDEEER-----------------------KILVRRKSGEVSEVWKAFASEDV-CRPGVHLPEAAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESS-LPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQ------INEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAKNLCA 813
VE L WR L+ GD LDA D W++S VV+ L+ + RV++H+ W ++WD + L PLH++ +WR +F G ++ W + TV V + ++ V+ SG + AS + C P VH+ + P P S+ + S + GT A PSG GY + +E + PGVVGL NLGNTCFMNS+LQCLS+T L ++F G+ IN NPLG G +A+ YA L++ MWSG + PTE K VI +YAP FAGY Q DSQE+++F+LDG+HEDLNRV KPY ++AG PDA A E WA +L RNDS+++DHC Q +SH+TCP C +ESITFDPYM+L++P+P + V T H +G RP+ +P ++K + LC
Sbjct: 243 VEALGWRRMLQFGDYLDAKDTSNHWYESQVVDIDLDKD-----RVKVHYLSWGEKWDVWFARNAPELQPLHSQVGEWRTTLSKGDAVEFGTGSTPGMKAS--WVEGTVVDVQSMDDDHDTDDEAWPPMPPKALYKGKVIRVKVQYMSGGLPHTKVVEASNQLLCLPNVHI-----------RSKKQPAQMPQSTATSTDVVKSEVKSSYSYSSGTYTATRNTNWSTPSG----GYSAYTSKYSEKAEFPGVVGLQNLGNTCFMNSVLQCLSNTKPLLEYFCQVDEGGELMYKREINRSNPLGMGGKIAKAYAMLMEKMWSGDSKVVTPTELKYVIGEYAPAFAGYSQQDSQEVLSFILDGIHEDLNRVLDKPYTNPIEHAGRPDADVAKEEWANYLKRNDSIIVDHCMAQLRSHVTCPSCQNESITFDPYMTLSVPVP--NQAWVLLTLHG--IGA-RPMQYGLHVPKEGVYADVKATLT-TLCG 699 HSP 2 Score: 190.274 bits (482), Expect = 2.516e-45 Identity = 106/243 (43.62%), Postives = 141/243 (58.02%), Query Frame = 0
Query: 1060 PYRLYLAKAAGDVVGEEVL--DDGSPFDVQALKGRVLMAAFEASMFEKWVVKEEADRTDPHASVQRHRLDGRTGEERARKP---IYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRR 1297
PY+L+++ A D ++ + D P +G E + V ++ ++ HAS T KP + L+ C+ KF+E+EQL E D WYCPKCK HV AFKK D++SLP++L+LHLKRF Y QG YS R+KI LV FP+ LDM D + G + + +YDLYAVSEH GGLGGGHYTA A N R+++WY+FNDS S + +TS AYVLFY RR
Sbjct: 845 PYKLHISNARADAFLQKDIPEDSADPLPCDVTRGSFTFT-LEWTPHGYKVGRKGSESPRLHASAD-------TAISHGGKPAAALDLRTCIAKFTEKEQLGENDTWYCPKCKTHVRAFKKFDLFSLPNILLLHLKRFRYAQGSYSM-QRDKINTLVTFPITDLDMADFVVGDIPPNTSTVYDLYAVSEHMGGLGGGHYTAKAMNPRNNKWYSFNDSCTSDTTPE----AAITSHAYVLFYLRR 1074
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|673014352|ref|XP_008861137.1| (hypothetical protein H310_00218 [Aphanomyces invadans] >gi|574482735|gb|ETW09726.1| hypothetical protein H310_00218 [Aphanomyces invadans]) HSP 1 Score: 279.256 bits (713), Expect = 6.541e-74 Identity = 175/484 (36.16%), Postives = 244/484 (50.41%), Query Frame = 0
Query: 371 VETLAWRFALKKGDALDAHD-RERWFDSVVVE-RLETNGQGVPRVRIHFRCWEDRWDTEKEVTSRALLPLHTKSPDWR---------QFYVGMPVELRHHNLWFQATVTQVDEEER-----------------------KILVRRKSGEVSEVWKAFASEDV-CRPGVHLPEAAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESS-LPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQ------INEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAKNLC 812
VE L WR L+ GD LDA D W++S VV+ L+ + RV++H+ W ++WD + L PLH++ +WR +F G ++ W + TV V + ++ V+ SG + AS + C P VH+ + P P S+ + S + GT A PSG GY + +E + PGVVGL NLGNTCFMNS+LQCLS+T L ++F G+ IN NPLG G +A+ YA L++ MWSG + PTE K VI +YAP FAGY Q DSQE+++F+LDG+HEDLNRV KPY ++AG PDA A E WA +L RNDS+++DHC Q +SH+TCP C +ESITFDPYM+L++P+P + V T H +G RP+ +P ++K + LC
Sbjct: 243 VEALGWRRMLQFGDYLDAKDTSNHWYESQVVDIDLDKD-----RVKVHYLSWGEKWDVWFARNAPELQPLHSQVGEWRTTLSKGDAVEFGTGSTPGMKAS--WVEGTVVDVQSMDDDHDTDDEAWPPMPPKALYKGKVIRVKVQYMSGGLPHTKVVEASNQLLCLPNVHI-----------RSKKQPAQMPQSTATSTDVVKSEVKSSYSYSSGTYTATRNTNWSTPSG----GYSAYTSKYSEKAEFPGVVGLQNLGNTCFMNSVLQCLSNTKPLLEYFCQVDEGGELMYKREINRSNPLGMGGKIAKAYAMLMEKMWSGDSKVVTPTELKYVIGEYAPAFAGYSQQDSQEVLSFILDGIHEDLNRVLDKPYTNPIEHAGRPDADVAKEEWANYLKRNDSIIVDHCMAQLRSHVTCPSCQNESITFDPYMTLSVPVP--NQAWVLLTLHG--IGA-RPMQYGLHVPKEGVYADVKATLT-TLC 698 HSP 2 Score: 190.274 bits (482), Expect = 2.594e-45 Identity = 106/243 (43.62%), Postives = 141/243 (58.02%), Query Frame = 0
Query: 1060 PYRLYLAKAAGDVVGEEVL--DDGSPFDVQALKGRVLMAAFEASMFEKWVVKEEADRTDPHASVQRHRLDGRTGEERARKP---IYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRR 1297
PY+L+++ A D ++ + D P +G E + V ++ ++ HAS T KP + L+ C+ KF+E+EQL E D WYCPKCK HV AFKK D++SLP++L+LHLKRF Y QG YS R+KI LV FP+ LDM D + G + + +YDLYAVSEH GGLGGGHYTA A N R+++WY+FNDS S + +TS AYVLFY RR
Sbjct: 864 PYKLHISNARADAFLQKDIPEDSADPLPCDVTRGSFTFT-LEWTPHGYKVGRKGSESPRLHASAD-------TAISHGGKPAAALDLRTCIAKFTEKEQLGENDTWYCPKCKTHVRAFKKFDLFSLPNILLLHLKRFRYAQGSYSM-QRDKINTLVTFPITDLDMADFVVGDIPPNTSTVYDLYAVSEHMGGLGGGHYTAKAMNPRNNKWYSFNDSCTSDTTPE----AAITSHAYVLFYLRR 1093
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|960998480|ref|XP_014814917.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform X5 [Calidris pugnax]) HSP 1 Score: 251.906 bits (642), Expect = 5.128e-69 Identity = 116/207 (56.04%), Postives = 153/207 (73.91%), Query Frame = 0
Query: 564 GRPGNGYVPGS-GTRTESSL--PGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPV 767
GR G+G+V S R +SL PG+ GLSNLGNTCFMNS LQCLS+T LTD+FL K+E +IN++NPLG +G +A YA+L+K +WSGR + + P FK + ++APQF+GYQQ DSQEL+ FLLDGLHEDLNRV++KPY+ ++D G PD++ A E W H RNDS+++D G +KS L CP+C S+TFDP+ LTLPLP+
Sbjct: 282 GRGGSGFVCNSYNCRDNASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYAELIKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPL 488
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|1130624682|ref|XP_019702095.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like isoform X2 [Elaeis guineensis]) HSP 1 Score: 256.914 bits (655), Expect = 7.933e-69 Identity = 133/293 (45.39%), Postives = 179/293 (61.09%), Query Frame = 0
Query: 520 PAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPVTSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAKNLC 812
P SR S + A P+ S+ + G GT + G S P + + + ++ +S G+ GL NLGNTCFMNS +QCL HT + ++FL E +INE+NPLG QG LA + +LL+ +WS T I P FK ++++APQF+GY QHDSQEL+ FLLDGLHEDLNRVR+KPY+ RD G PD +FA ECW H ARNDS+++D CQGQYKS L CP CG S+TFDP+M L+LPLP T + T + G P+ +LP +L + ++ + C
Sbjct: 32 PLEPSRSSITIAGGPTLSNGYSTG----FGTHLLQGNNFSL-PLRDADSDDILNNRSKVDSC--GLTGLHNLGNTCFMNSAIQCLVHTPPVVEYFLKDYSE-EINEENPLGMQGELAIAFGELLRKLWSSGRTSIAPRAFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVRKKPYIEARDADGRPDEEFADECWKNHKARNDSIIVDVCQGQYKSTLVCPVCGKVSVTFDPFMYLSLPLPSTVTRMMTVTVFSGD-GSSLPMPFTVTLPKNGCCKDLIRALSASCC 315 HSP 2 Score: 138.658 bits (348), Expect = 9.361e-30 Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 0
Query: 1136 RKPIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPTREKIEDLVHFPVEGLDMRDVMRGHVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKR 1296
++ + L CLE F + E L D WYCP CK+H A KK+D+W LP++L++HLKRFSY + L + K++ V+FPV LD+ ++ +Y+LYA+S H GGLGGGHY+A AK + WY F+DS VSPVNE +++ TS AYVLFY+R
Sbjct: 541 QEAVTLFSCLETFLKEEPLGPDDMWYCPSCKEHRQATKKLDLWRLPEILVVHLKRFSYSRFL-----KNKLDTFVNFPVHNLDLGKYVKCRAVPRHSYVYELYAISNHYGGLGGGHYSAYAKLIEEDSWYHFDDSHVSPVNEHEIK----TSAAYVLFYRR 692
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|960998478|ref|XP_014814916.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform X4 [Calidris pugnax]) HSP 1 Score: 252.677 bits (644), Expect = 1.247e-68 Identity = 124/251 (49.40%), Postives = 172/251 (68.53%), Query Frame = 0
Query: 564 GRPGNGYVPGS-GTRTESSL--PGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPV--TSMIRVAFTFHAWPLGKHRPLYVAASLPATATANELKQWIAK 809
GR G+G+V S R +SL PG+ GLSNLGNTCFMNS LQCLS+T LTD+FL K+E +IN++NPLG +G +A YA+L+K +WSGR + + P FK + ++APQF+GYQQ DSQEL+ FLLDGLHEDLNRV++KPY+ ++D G PD++ A E W H RNDS+++D G +KS L CP+C S+TFDP+ LTLPLP+ ++ V + A P + RP+ +P ++L + ++K
Sbjct: 282 GRGGSGFVCNSYNCRDNASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYAELIKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRRDRLMEVTLVY-ADP--QRRPVQYRVVVPMMGAISDLCESLSK 529
BLAST of EWM27551.1 vs. NCBI_GenBank
Match: gi|1110909016|ref|XP_019202626.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform X6 [Oreochromis niloticus]) HSP 1 Score: 249.98 bits (637), Expect = 3.919e-68 Identity = 120/260 (46.15%), Postives = 168/260 (64.62%), Query Frame = 0
Query: 508 AAPRSAPSADASPAPGSRPSSSTAPSPSASSAFGAGTGRVLGTGVAVGERASGNPSGRPGNGYVPGSGTRTESSLPGVVGLSNLGNTCFMNSMLQCLSHTGVLTDFFLSGKHEGQINEDNPLGKQGVLARTYAKLLKDMWSGRFTFIYPTEFKRVISQYAPQFAGYQQHDSQELMNFLLDGLHEDLNRVRQKPYMAVRDYAGEPDAQFAGECWARHLARNDSVVIDHCQGQYKSHLTCPRCGHESITFDPYMSLTLPLPV 767
AP+S+ +++ S P PSS T + +S+F + V + PS P + S +S G+ GLSNLGNTCFMNS +QCLS+T LT++FL K+ ++NEDNPLG +G +AR YA+L+K +WSG+++++ P FK + ++APQF+GYQQ DS EL+ FLLDGLHEDLNR+R+KPY+ ++D G PD A E W H+ RNDS+++D G +KS L CP C S+TFDP+ LTLPLP+
Sbjct: 225 TAPKSSGASNLSALPKISPSSLTN---NHNSSFNSRN---------VKNSSYSLPSYHPYSNSYDYSDQSRQSERSGLCGLSNLGNTCFMNSAVQCLSNTPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQLWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYIQLKDANGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVCSKVSVTFDPFCYLTLPLPM 472 The following BLAST results are available for this feature:
BLAST of EWM27551.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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