EWM27576.1, cds3124 (CDS) Nannochloropsis gaditana

Overview
NameEWM27576.1
Unique Namecds3124
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:799301..799338 +
Alignment locationCM002460.1:799623..800037 +
Alignment locationCM002460.1:800138..801325 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27576.1
Productabc membrane spanning protein (amino acid)
Orig transcript idgnl|cribi|Naga_100015g27.6392.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:799301..799338 +
CM002460.1supercontigCM002460.1:799623..800037 +
CM002460.1supercontigCM002460.1:800138..801325 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0003333amino acid transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Homology
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|585109843|gb|EWM27576.1| (abc membrane spanning protein (amino acid) [Nannochloropsis gaditana])

HSP 1 Score: 1094.34 bits (2829), Expect = 0.000e+0
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0
Query:    1 MPRESKLTFVHLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSDSGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVYWLDPPWVQQDLVRKRALSLEGSAQGPYFMNTDEEEGRADLGHFDPLSSSITSMTTLTPIMASPQRRRPLKGATSNGGNRGNTWRKEYCLIGDEGLKTQSSWCDV 546
            MPRESKLTFVHLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSDSGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVYWLDPPWVQQDLVRKRALSLEGSAQGPYFMNTDEEEGRADLGHFDPLSSSITSMTTLTPIMASPQRRRPLKGATSNGGNRGNTWRKEYCLIGDEGLKTQSSWCDV
Sbjct:    1 MPRESKLTFVHLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSDSGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVYWLDPPWVQQDLVRKRALSLEGSAQGPYFMNTDEEEGRADLGHFDPLSSSITSMTTLTPIMASPQRRRPLKGATSNGGNRGNTWRKEYCLIGDEGLKTQSSWCDV 546          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|1173953441|gb|OQS00984.1| (Amino Acid-Polyamine-Organocation (APC) Family [Thraustotheca clavata])

HSP 1 Score: 229.18 bits (583), Expect = 3.126e-65
Identity = 150/463 (32.40%), Postives = 244/463 (52.70%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSH--SWTNIWGPKLVLEVGVWILTYSV-FTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVYWLDPPWVQQDLVRKRALSLEGSAQGP 468
            HLW + VG+ IGG+F GW + L  G  G L+ LAI+T  YM L+  IAE+S      GG + F  +   G   AY  G+AE LK++   ++   A + Y++    + +   P       VW +T+ V F LLNI G+ MS N+Q A+T +S++ L  FY+ +   VD     +   +Q   +    A ++    + +W+Y GIE +PL      NPA+ MP+ II S  TL  ++ LTL  NS++ PG V + +S APL +G+K +  +    HGVS+L+ +GL+ SF+ F+   G  +  +A +GILP+ L  +HP   TP+VAL   + IGL++      T+      +VLIN++++G LV+Y  Q  +++  +  + D    +RSP G PGA +   +   +L    +  +        ++ A+  F +A ++Y     W Q    +    +L+ S + P
Sbjct:   18 HLWALGVGTVIGGDFFGWQAGLSAGFLGCLINLAIATFFYMLLAFSIAELSTAIPCGGGPYVF-AQRAWGPGAAYFAGLAEALKVVVVVAIASSANSGYMNQVLGYESNMSP-------VWWVTFCVLFLLLNIGGVAMSFNVQCAATFLSLLFLIIFYVGAAFNVDYDKWVV---QQDWEYQGGAAGLFSGFSFCMWFYFGIEELPLAVEETINPARDMPRGIILSFGTLTVLSFLTLFFNSAISPGAVGILNSLAPLFEGYKTIFGDNSATHGVSVLLIVGLLSSFHSFLYCMGRLLHAMAREGILPSALAKLHPTRRTPYVALLTGTFIGLAIAFILHYTIGDDVMTAVLINLSLIGALVSYAFQMSSFIRLRLIAPDMERPYRSPFGLPGAIICFLMVFAVLASIIYQGAQSSNFLISVIAAIVYFVIAAIIY----VWKQTTQAKAVETTLQESPESP 465          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|695370112|ref|XP_009514226.1| (amino acid/polyamine transporter [Phytophthora sojae] >gi|348687137|gb|EGZ26951.1| amino acid/polyamine transporter [Phytophthora sojae])

HSP 1 Score: 218.009 bits (554), Expect = 3.986e-61
Identity = 135/402 (33.58%), Postives = 225/402 (55.97%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSH--SWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACLGLGLSV 408
            HLW + VG+ + G+F GW S L+ G  G L+ LA+ T+LY+ LS  IAE+S      GG + F   + +G   A+  G+AE LK++ T ++ V  ++SY++   S ++ +GP        W + Y +F  LNIVG+EM+  +Q  +TVVS+++L  FY+ +   +D Q        Q    +D      +   ++LW+YLGIE +PL   +  NP + MP  +++S+ATL  +A  T++ NS ++PG   +  S +PLL G++++  +     G S ++ LGLI SF+ FV   G+ +  +A DG LP  L  +HP  GT +V+L   S IG  ++      +  ++  SV+IN+A++G +++Y  Q  +++  +    +    +RSP G  GA + L L V
Sbjct:   15 HLWALGVGAVVSGDFFGWQSGLVAGFDGLLIILALVTVLYVLLSFSIAELSTTVPAGGGPYVFALHA-IGPRAAFFAGLAESLKVVITCAVVVTGISSYMNQLLSLSSEYGPIW------WAVFYVLFVSLNIVGIEMTFRVQAVTTVVSVVILLVFYIGAATKIDYQQWVADRNWQFPAGWDGAV---VGYSFALWFYLGIEELPLAVEATINPERNMPLGLMSSIATLVVLAFCTVIFNSMIYPGADEIYSSTSPLLTGYQSVFGDNSTTSGFSWMLILGLIASFHSFVFCMGQLLYAIARDGYLPHILTTLHPTRGTMYVSLITGSSIGFLVVLVLHFIIGDTRLGSVMINLALIGAVISYCFQLTSFIRLRIKEPNRVRPYRSPFGVAGAVVSLALCV 406          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|1214689044|gb|OWZ04759.1| (Amino acid/polyamine transporter [Phytophthora megakarya])

HSP 1 Score: 218.394 bits (555), Expect = 4.312e-61
Identity = 145/461 (31.45%), Postives = 242/461 (52.49%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSH------SWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVF--GVALLVYWLDPPW-VQQDLVRKRALS 460
            HLW + VG+ I GNF GW S+L+ G  G L+ L+I T+ Y+ LS  IAE+SA     GG + F     +G++ A+  G+AE LK++ T ++    +ASY +        ++ IW          WI  Y +F  LNIVG+EM+  +QV  TV S+++L+ FY+ +   +D Q   +     +   ++    +     ++LW+YLGIE +PL       P + MP+ +IAS+ +L  ++  T++L+S + PG   +  + +PLL G++ +  +     G S L+ +GLI SF+ FV   G+ +  +A DG LP  L  +HP  GT HVAL   S+I L L       +   +  SV+IN++++G +V+Y+ Q  A++  +    +    ++SP G PGA +   LS+  L    +  +        +L+A++ F  G    +Y + P   +  D V  +  S
Sbjct:   27 HLWALGVGTVISGNFYGWQSSLVAGFDGLLILLSIVTVQYVLLSFSIAELSATVPHGGGPYVFALHG-IGKMAAFFAGIAECLKVVVTTAVAATGIASYFAELIGVGSEYSPIW----------WIACYIIFVTLNIVGVEMTFRVQVFVTVCSVILLSVFYVGAATVLDYQKWVV----DRDWNYNGWDGILEGASFTLWFYLGIEELPLAIDETIEPTKNMPRGLIASIISLIVISFCTVILSSMISPGADEMYANASPLLTGYQTIFGDNSTTSGFSWLLLIGLISSFHSFVFCMGKLLYAIACDGYLPQMLTKLHPTRGTTHVALISGSIIALVLAIVLHYAIGDERLGSVMINLSLIGAIVSYMFQLTAFIMLRIREPERPRPYKSPFGIPGALVCFILSIFSLVSIIYSGTSSYVFLASVLVAIAYFALGAVYFIYCVQPRLEIGNDAVSAKEFS 472          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|669151358|ref|XP_008611241.1| (hypothetical protein SDRG_07199 [Saprolegnia diclina VS20] >gi|530737249|gb|EQC35491.1| hypothetical protein SDRG_07199 [Saprolegnia diclina VS20])

HSP 1 Score: 216.853 bits (551), Expect = 1.632e-60
Identity = 143/446 (32.06%), Postives = 237/446 (53.14%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASY------LSHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDD------LASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVY 442
            HLW + VG+ IGG+F GW + L  G  G L+ L I++I YM L+  IAE+S      GG + F  +   G   AY  G+AE LK++   ++   A + Y      LS S + +W          W+L   +F LLNI G+ MS N+QV +T +S++ L  FY+ +   +D           K +  DD      +  ++    +++W++ GIE +PL      +PA  MP+ II S  +L  +A LTL  N+++ PG V + +S APL +G+K +  +   + GVS+L+ +GL+ SF+ F+   G  +  +A +GILP+ L  +HP   TP+VAL   + +GL L      T+  +   +VLIN++++G LV+Y  Q  +++  +W++ D    ++SP G PGA +   +  ++L    +  +        ++ A   FG+A +VY
Sbjct:   21 HLWALGVGTVIGGDFFGWQAGLSAGFLGYLINLGIASIFYMLLAFSIAELSTAIPCGGGPYIF-AQKAWGPGAAYFAGLAEALKVVVVVAIACSANSGYMNEVLGLSSSVSPLW----------WVLFCGIFVLLNIGGVAMSFNIQVVATCLSVLFLVIFYVGAAFHIDYD---------KWIVADDWEFQGGVGGLFSGFSFAMWFFFGIEELPLAVEETVDPATHMPRGIILSFVSLCTLAFLTLFFNTAIAPGAVGIMNSLAPLFEGYKTIFGDTSAVRGVSVLLIIGLLSSFHSFLYAMGRLLYAMAREGILPSALAKLHPTRHTPYVALLSGTSLGLLLAIVLHFTIGDAVMTAVLINLSLIGALVSYAFQMSSFIKLRWSAPDMERPYKSPFGLPGAVVCFLMVFVILASIVYQGAQSSDFLVSIIAAAVYFGIAGVVY 446          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|1173959304|gb|OQS05555.1| (Amino Acid-Polyamine-Organocation (APC) Family [Thraustotheca clavata])

HSP 1 Score: 216.083 bits (549), Expect = 2.354e-60
Identity = 140/441 (31.75%), Postives = 228/441 (51.70%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASY------LSHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVYW 443
            HLW + VG+ IGG+F GW + L  G  G  + L I+T+ YM L   IAE+S      GG + F  +   G  GAY  G+AE LKI+ T +    A + Y      LS +W+ +W          W++   +F LLNI G+ ++ N Q A+T +S++ L  FY+ S+  +D     +    Q   +      M+    + +W+Y G+E +PL      +PA+ MPK II S ATL  +A LTL  NS V PG   + +  APL +G+K +  +   + G+ +L+ +GL+ SF+ F+  +G  +  +A +GILP  L  +HP   TP++AL   ++  +        T+      SVLIN++++G LV+Y  Q  +++  +  + D    +RSP G PGA L   +   +L    +  +        +++A+  F VA ++Y+
Sbjct:   17 HLWALGVGTVIGGDFFGWQAGLSAGFMGYAINLIIATVFYMLLVFSIAELSTAIPCAGGPYVF-AQRAWGPTGAYFAGIAEALKIVVTVAAASSANSGYMNGVLGLSSAWSPVW----------WVVFCFIFLLLNIGGVALTFNAQAATTCISVLFLVIFYIGSISHIDYDKWVV---AQDWEYQGGALGMFSGFSFVMWFYFGVEELPLAVEEAVDPAKDMPKGIILSFATLVVLAFLTLCCNSMVSPGANGVLNVLAPLFEGYKTVFGDTNTVRGLCVLLVIGLLSSFHSFIYCSGRLLYAMAREGILPEPLARLHPTRQTPYIALTVVTVFAVVADIILHYTIGDDVLTSVLINLSLIGALVSYAFQTASFIRLRLKAPDMERPYRSPFGLPGAILCFLMVFAILASIIYQGAESSDFLVSVIVAIVYFAVAGIIYF 443          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|813171396|ref|XP_012204453.1| (hypothetical protein SPRG_09637 [Saprolegnia parasitica CBS 223.65] >gi|641530681|gb|KDO24793.1| hypothetical protein SPRG_09637 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 215.698 bits (548), Expect = 4.539e-60
Identity = 141/440 (32.05%), Postives = 234/440 (53.18%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASY------LSHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVFGVALLVY 442
            HLW + VG+ IGG+F GW + L  G  G L+ L I+++ YM L+  IAE+S      GG + F  +   G   AY  G+AE LK++   ++   A + Y      LS S + +W          W+L   +F LLNI G+ MS N+QV +T +S++ L  FY+ +   VD     +    +   F   +  ++    +++W++ GIE +PL      +PA  MP+ II S  +L  +A LTL  N+++ PG V +  S APL +G+K +  +   + GVS+L+ +GL+ SF+ F+   G  +  +A +GILP+ L  +HP   TPHVAL   + +GL L      T+  +   +VLIN++++G LV+Y  Q  +++  +W++ D    ++SP G PGA +   +  ++L    +  +        ++ A   F +A +VY
Sbjct:   21 HLWALGVGTVIGGDFFGWQAGLSAGFLGYLINLGIASLFYMLLAFSIAELSTAIPCGGGPYVF-AQRAWGPGAAYFAGLAEALKVVVVVAIACSANSGYMNEVLGLSSSVSPLW----------WVLFCGIFVLLNIGGVAMSFNIQVVATCLSVLFLVIFYIGAAFHVDYDKWIV---AENWEFQGGVGGLFSGFSFAMWFFFGIEELPLAVEETIDPATHMPRGIILSFVSLCTLAFLTLFFNTAIAPGAVGIMTSLAPLFEGYKTIFGDTSAVRGVSVLLIIGLLSSFHSFLYAMGRLLYAMAREGILPSALAKLHPTRHTPHVALLSGTSLGLLLAIVLHFTIGDAVMTAVLINLSLIGALVSYAFQMSSFIKLRWSAPDMERPYKSPFGLPGAVVCFLMVFVILASIVYQGAQSSDFLVSIVAAAVYFAIAGIVY 446          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|970651504|gb|KUF90311.1| (Amino acid/polyamine transporter family 1 [Phytophthora nicotianae])

HSP 1 Score: 214.542 bits (545), Expect = 1.389e-59
Identity = 141/446 (31.61%), Postives = 229/446 (51.35%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYL------SHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAY--LSRQWASSDSGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVF--GVALLVYWLDP 446
            HLW + VG+ I G+F GW + L+ G  G L+ LA+ T+ Y+ LS  IAE+SA     GG + F     +G+  A+  G+AE LK++ T  +    + SY       S  +  IW          WI+ Y VF  LN++G+EM+  +Q A+TV+S++VL  FY+ +   +  Q   +     +   +           ++LW+YLGIE +PL       P + MP+ ++ S+ TL  ++  T+V NS + PG   +  + +PLL G++ +  +     G + ++ +GLI SF+ FV   G+ +  +A DG LP  L  +HP  GT +V+L   SLI L L+      +  ++  SVLIN+A++G +V+YI Q  A+  L  +       ++SP G PGA L + L +  L    +  +        +L+A+  F  G    VY + P
Sbjct:   26 HLWALGVGAVISGDFFGWQAALVAGFDGLLILLAVVTVQYVLLSFSIAELSATVPHGGGPYVFALHG-IGKTAAFFAGIAECLKVVVTTGVAATGIGSYFAEIVGVSSDFGPIW----------WIICYVVFVTLNVMGVEMTFRVQAAATVMSVIVLLVFYIGAATKISYQDWVV----DRDWNYKGWDGXLQGASFTLWFYLGIEELPLAIDETIEPTKNMPRGLMTSIITLIVISFCTVVFNSMISPGADEIYVNSSPLLAGYQTVFGDNSTTSGFTWILIVGLISSFHSFVFCMGKLLYAIACDGYLPHILTKLHPSRGTTYVSLIAGSLIALVLVIVLHFAIGDTRLGSVLINLALIGAIVSYIFQLTAFIMLRIREPERPRPYKSPFGVPGAVLCIILCIFSLVSIIYSGTSSYVFLASVLVAIGYFAIGAVYFVYRVKP 456          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|1173950133|gb|OQR98112.1| (Amino Acid-Polyamine-Organocation (APC) Family [Achlya hypogyna])

HSP 1 Score: 213.386 bits (542), Expect = 2.807e-59
Identity = 138/400 (34.50%), Postives = 216/400 (54.00%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYLSHSWTNIWGPKLVLEVG-----VWILTYSV-FTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLPGLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAYLSRQWASSD--SGFRSPLGRPGACL 402
            HLW + VG+ IGG+F GW + L  G  G L+ LAI+T+ YM L+  IAE+S      GG + F  +   G   AY  G+AE LK++   ++   A + Y++           VL  G     VW  T+ + F LLNI G+ MS N+Q  +T +S++ LA FY+ +   VD     +   +Q   F      ++    +++W+Y GIE +PL       PA+ MP+ II S  TL  +A LTL  N+++ PG   +  S APL +G+K +  +     GVS+L+ +GL+ SF+ F+   G  +  +A +GILP  L  +HP   TP+VAL   + +GL+L      T+      +VLIN++++G LV+Y  Q  +++  ++ + D    +RSP G PGA +
Sbjct:   17 HLWALGVGTVIGGDFFGWQAGLSAGFLGYLINLAIATVFYMLLAFSIAELSTAIPCGGGPYVF-AQRAWGPGAAYFAGLAEALKVVVVVAIACSANSGYMNE----------VLGFGTEMSPVWWFTFCILFVLLNIGGVAMSFNVQAVATGLSLLFLAIFYVGAATQVDYDKWVV---QQDWEFQGGAGGLFGGFSFAMWFYFGIEELPLAVEETIEPAKDMPRGIILSFVTLTVLAFLTLFFNTAIAPGATGIMASLAPLFEGYKTIFGDTSATRGVSVLLIIGLLSSFHSFLYCMGRLLFAMAREGILPRALATLHPTRHTPYVALLTGTTLGLALALILHFTIGDEVMTAVLINLSLIGALVSYAFQMSSFIRLRFTAPDLLRPYRSPFGLPGAVV 402          
BLAST of EWM27576.1 vs. NCBI_GenBank
Match: gi|970660730|gb|KUF98255.1| (RNA polymerase II-associated protein 3 [Phytophthora nicotianae])

HSP 1 Score: 213.772 bits (543), Expect = 2.941e-59
Identity = 144/447 (32.21%), Postives = 231/447 (51.68%), Query Frame = 0
Query:   11 HLWGIAVGSAIGGNFVGWNSTLLGGLAGALLGLAISTILYMTLSLCIAEMSAHTLKIGGSHTFVGESPLGRLGAYVCGVAELLKIIPTGSLCVFAVASYL------SHSWTNIWGPKLVLEVGVWILTYSVFTLLNIVGMEMSINLQVASTVVSIMVLASFYMPSLVAVDLQTHSLP-GLEQKGVFFDDLASMWIALPYSLWWYLGIENVPLMAGSMSNPAQVMPKVIIASMATLAAVATLTLVLNSSVFPGVVSLADSKAPLLDGFKALTENQYVLHGVSLLISLGLIVSFNCFVLYAGETIAVLASDGILPTCLGVIHPRYGTPHVALAGSSLIGLSLLACAVGTMSGSKAVSVLINVAVVGGLVAYILQFVAY--LSRQWASSDSGFRSPLGRPGACLGLGLSVMLLGCEFFHASVEVTDAEGLLMAMSVF--GVALLVYWLDP 446
            HLW + VG+ I G+F GW + L+ G  G L+ LA+ T+ Y+ LS  IAE+SA     GG + F     +G+  A+  G+AE LK++ T  +    + SY       S  +  IW          WI+ Y VF  LN++G+EM+  +Q A+TV+S++VL  FY+ +   +  Q   +      KG  +D          ++LW+YLGIE +PL       P + MP+ ++ S+ TL  ++  T+V NS + PG   +  + +PLL G++ +  +     G + ++ +GLI SF+ FV   G+ +  +A DG LP  L  +HP  GT +V+L   SLI L L+      +  ++  SVLIN+A++G +V+YI Q  A+  L  +       ++SP G PGA L + L +  L    +  +        +L+A+  F  G    VY + P
Sbjct:   26 HLWALGVGAVISGDFFGWQAALVAGFDGLLILLAVVTVQYVLLSFSIAELSATVPHGGGPYVFALHG-IGKTAAFFAGIAECLKVVVTTGVAATGIGSYFAEIVGVSSDFGPIW----------WIICYVVFVTLNVMGVEMTFRVQAAATVMSVIVLLVFYIGAATKISYQDWVVDRDWNYKG--WDGFLQ---GASFTLWFYLGIEELPLAIDETIEPTKNMPRGLMTSIITLIVISFCTVVFNSMISPGADEIYVNSSPLLAGYQTVFGDNSTTSGFTWILIVGLISSFHSFVFCMGKLLYAIACDGYLPHILTKLHPSRGTTYVSLIVGSLIALVLVIVLHFAIGDTRLGSVLINLALIGAIVSYIFQLTAFIMLRIREPERPRPYKSPFGVPGAVLCIILCIFSLVSIIYSGTSSYVFLASVLVAIGYFAIGAVYFVYRVKP 456          
The following BLAST results are available for this feature:
BLAST of EWM27576.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109843|gb|EWM27576.1|0.000e+0100.00abc membrane spanning protein (amino acid) [Nannoc... [more]
gi|1173953441|gb|OQS00984.1|3.126e-6532.40Amino Acid-Polyamine-Organocation (APC) Family [Th... [more]
gi|695370112|ref|XP_009514226.1|3.986e-6133.58amino acid/polyamine transporter [Phytophthora soj... [more]
gi|1214689044|gb|OWZ04759.1|4.312e-6131.45Amino acid/polyamine transporter [Phytophthora meg... [more]
gi|669151358|ref|XP_008611241.1|1.632e-6032.06hypothetical protein SDRG_07199 [Saprolegnia dicli... [more]
gi|1173959304|gb|OQS05555.1|2.354e-6031.75Amino Acid-Polyamine-Organocation (APC) Family [Th... [more]
gi|813171396|ref|XP_012204453.1|4.539e-6032.05hypothetical protein SPRG_09637 [Saprolegnia paras... [more]
gi|970651504|gb|KUF90311.1|1.389e-5931.61Amino acid/polyamine transporter family 1 [Phytoph... [more]
gi|1173950133|gb|OQR98112.1|2.807e-5934.50Amino Acid-Polyamine-Organocation (APC) Family [Ac... [more]
gi|970660730|gb|KUF98255.1|2.941e-5932.21RNA polymerase II-associated protein 3 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3132rna3132Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications