EWM27568.1, cds3116 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|585109835|gb|EWM27568.1| (hypothetical protein Naga_100015g35 [Nannochloropsis gaditana]) HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MSGGCPLRVLLRPLLLCAILSRRIVSFSTRRPLFCARPSTSAFDWSSNKHSIATIYPSTSYKLSALSSTPWPLPEVEARAALPSTRRAARDVSMAKLAKITGGAAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKKA 289 MSGGCPLRVLLRPLLLCAILSRRIVSFSTRRPLFCARPSTSAFDWSSNKHSIATIYPSTSYKLSALSSTPWPLPEVEARAALPSTRRAARDVSMAKLAKITGGAAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKKA Sbjct: 1 MSGGCPLRVLLRPLLLCAILSRRIVSFSTRRPLFCARPSTSAFDWSSNKHSIATIYPSTSYKLSALSSTPWPLPEVEARAALPSTRRAARDVSMAKLAKITGGAAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKKA 289
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|223999317|ref|XP_002289331.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974539|gb|EED92868.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 176.792 bits (447), Expect = 1.470e-50 Identity = 101/203 (49.75%), Postives = 128/203 (63.05%), Query Frame = 0 Query: 88 AARDVSMAKLAKITGGAAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQAL-RGHVP-SIDPALPDVKK 288 AA + LA GG A + + S L++LWG GV +L AI+R++PIALEPFK T A Y+ L AY EGYKGFQ KFSPLVV R+ TL SP H + A YSMGLFHA+KKR IVSW++++GV +V AVK L +P+R+IVDAGVV GLSWG +SI G Y +L G P +DP+LP+ K+ Sbjct: 72 AASQRTPTSLANGGGGEAIGQDLNLTTSKVLASLWGTSGVAYILLKAIKRVVPIALEPFKGEGV-VPLTQFQLAAYIITCLWFAYVEGYKGFQRKFSPLVVSRSFTLQSTSPFHHLLFAPFYSMGLFHATKKRMIVSWSVSIGVAAIVAAVKRLPYPWRNIVDAGVVIGLSWGTISIIGGYVISLVTGIAPIDVDPSLPESKE 273
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|551536295|ref|XP_005756872.1| (hypothetical protein EMIHUDRAFT_121633 [Emiliania huxleyi CCMP1516] >gi|551603490|ref|XP_005783251.1| hypothetical protein EMIHUDRAFT_113082 [Emiliania huxleyi CCMP1516] >gi|485603916|gb|EOD04443.1| hypothetical protein EMIHUDRAFT_121633 [Emiliania huxleyi CCMP1516] >gi|485636225|gb|EOD30822.1| hypothetical protein EMIHUDRAFT_113082 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 174.096 bits (440), Expect = 3.315e-50 Identity = 103/212 (48.58%), Postives = 126/212 (59.43%), Query Frame = 0 Query: 80 AALPSTRRAARDVSMAKLAKITGGAAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSP---LLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKK 288 +A P+ RAAR A L + A+P + L WGV G + +L+ AI RL PIA++P + T L W Y G AY EGYK FQ KFSPLVV+RA+TL RSP LLH LA YSMGLFHASKKR+ VSW+I+LGV ++ VK L +P+RS+VDAGV GL WG SI IY +AL G P +DP LP K Sbjct: 18 SARPAIGRAAR----ADLIAASASASPVPTADAARG--LRTAWGVCGFLGILAQAIGRLAPIAMQPILQRD----ITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPLLHSALAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKEDK 219
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|922863742|gb|KOO31125.1| (hypothetical protein Ctob_002280 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 166.392 bits (420), Expect = 4.811e-47 Identity = 89/182 (48.90%), Postives = 120/182 (65.93%), Query Frame = 0 Query: 104 AAPAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPD 285 AA A + + + ++ WGV G + +L++AI+RL PIA++PF + + L W Y G I AY EGY FQ KFSPLVV+RA+TL + +H LA YSMGL HA+KKR+IVSW++++ V +V VK L +P+RSIVDAGV GL+WGA+SI IYA+AL G P +DP LP Sbjct: 42 AAKASPAAPRNAHGIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRD----LSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLPS 219
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|219119275|ref|XP_002180401.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407874|gb|EEC47809.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 165.236 bits (417), Expect = 4.483e-46 Identity = 94/186 (50.54%), Postives = 125/186 (67.20%), Query Frame = 0 Query: 119 SALWGVVGVVAMLSNAIRRLLPIALEPFKKTATP---------TAFTPLH--WAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPR---SPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQA-LRGHVP-SIDPALPDVKK 288 +++WG GV+ +L+ AI+R+LPIALEPF A P + + H ++ Y+ L AY EGYKGFQLKFSPLVVKR+ TL P + H VLA YSMGL HA+KKR+I+SW++++GV G+V AVK +P+R+IVDAGVV GL+WG+LSI IY ++ + G P ID ALP KK Sbjct: 87 ASIWGTGGVLYILAKAIKRVLPIALEPFVAGAVPLNQVQLGTLVSHSTFHLRYSAYIATCLWFAYVEGYKGFQLKFSPLVVKRSFTLVPGKNGTSWYHFVLAPFYSMGLVHATKKRKIISWSVSIGVAGIVAAVKRFPYPWRNIVDAGVVVGLTWGSLSILLIYIKSWMIGQPPQQIDAALPTAKK 272
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|397644102|gb|EJK76252.1| (hypothetical protein THAOC_01998 [Thalassiosira oceanica]) HSP 1 Score: 168.703 bits (426), Expect = 5.703e-44 Identity = 93/171 (54.39%), Postives = 115/171 (67.25%), Query Frame = 0 Query: 118 LSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGP-RSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQA-LRGHVP-SIDPALPD 285 +S+LWG VGV +L AI+R++PIALEPF K T YV AY EGYKGFQ KFSPLVV R+ TL P +SP+ H +LA YSM LFHA+KKR IVSW++ +GV +V VK +P+R+IVDAGVV GLSWG +SI G YA + L G P +DPALP+ Sbjct: 535 VSSLWGAVGVSYILLKAIKRVVPIALEPFGKGEGVIPLTRSQLIAYVATCFGFAYMEGYKGFQRKFSPLVVSRSFTLQPGKSPIHHLLLAPFYSMALFHATKKRMIVSWSVTIGVAAIVALVKRSPYPWRNIVDAGVVVGLSWGTISILGGYAISLLTGIAPIGVDPALPE 705
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|1210518283|dbj|GAX22895.1| (hypothetical protein FisN_24Lh182 [Fistulifera solaris]) HSP 1 Score: 155.992 bits (393), Expect = 9.719e-43 Identity = 84/171 (49.12%), Postives = 114/171 (66.67%), Query Frame = 0 Query: 118 LSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPR---SPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQA-LRGHVPSIDPALP 284 ++WG GV+ +L+ AI+R++PIA EPF A P T Y+ L AY EGYKGFQ KFSPLVV R+ TL P + H +LA YSMG+ HA++KR IVSW++ +GV +V VK +P+R+IVDAGVVAGL+WG+LSI +Y +A ++G P++D ALP Sbjct: 66 FGSIWGTGGVLYILAKAIKRVMPIAQEPFLAGAVP--LTQFQLGAYIVTCLWFAYVEGYKGFQQKFSPLVVTRSFTLIPGKNGTQWYHFLLAPLYSMGMIHATRKRAIVSWSVTMGVAAIVALVKRFPYPWRNIVDAGVVAGLTWGSLSILFLYIRAWMQGKPPAVDAALP 234
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|1210523428|dbj|GAX17752.1| (hypothetical protein FisN_24Hh182 [Fistulifera solaris]) HSP 1 Score: 154.451 bits (389), Expect = 5.529e-42 Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 0 Query: 118 LSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPR---SPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQA-LRGHVPSIDPALP 284 ++WG GV+ +L+ AI+R++PIA EPF A P T Y+ L AY EGYKGFQ KFSPLVV R+ TL P + H + A YSMG+ HA++KR IVSW++ +GV +V VK +P+R+IVDAGVVAGL+WG+LSI +Y +A ++G P++D ALP Sbjct: 87 FGSIWGTGGVLYILAKAIKRVMPIAQEPFLAGAVP--LTQFQLGAYIVTCLWFAYVEGYKGFQQKFSPLVVTRSFTLIPGKNGTQWYHFLFAPLYSMGMIHATRKRAIVSWSVTMGVAAIVALVKRFPYPWRNIVDAGVVAGLTWGSLSILFLYIRAWMQGKPPAVDAALP 255
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|299117526|emb|CBN75370.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 154.066 bits (388), Expect = 2.376e-41 Identity = 90/189 (47.62%), Postives = 115/189 (60.85%), Query Frame = 0 Query: 116 FSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGP----------------RSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVKK 288 F +++ WGVV VV +L NA++RL PIA++PF + + GFQ KFSPLVVKRALTL R+ L +LA PYSMGLFHA+KKR+ VSW++ GV+ LV+ VK L +P+RSIVDAGVV GLS+G LSI I+A+A+ G PSIDPALP+ KK Sbjct: 149 FGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL--------------------------GFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEKK 311
BLAST of EWM27568.1 vs. NCBI_GenBank
Match: gi|1100142198|emb|SFD59587.1| (hypothetical protein SAMN02745121_00799 [Nannocystis exedens]) HSP 1 Score: 142.124 bits (357), Expect = 5.834e-38 Identity = 77/164 (46.95%), Postives = 103/164 (62.80%), Query Frame = 0 Query: 122 WGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPD 285 WG++GVVA+L +AI RL P+A+EP TPL WA YVG++L YAEGYKGFQ F P V RA L LH LA + MGLF+A++KR ++SW + +GV LV V+ L P+R IVDAGVV GLS+G +++ + LRG ++ P +PD Sbjct: 33 WGMLGVVALLVSAIVRLTPLAVEPLT-----VGMTPLQWALYVGWSLFNLYAEGYKGFQKAFVPRAVARAFYLARYPRPLHVALAPLFCMGLFYANRKRLMLSWGLVIGVTALVTLVRGLDQPWRGIVDAGVVLGLSYGTVALLAAFFAVLRGRPITVSPQVPD 191 The following BLAST results are available for this feature:
BLAST of EWM27568.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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