EWM27570.1, cds3104 (CDS) Nannochloropsis gaditana

Overview
NameEWM27570.1
Unique Namecds3104
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:740500..740502 +
Alignment locationCM002460.1:740703..743522 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27570.1
ProductDNA repair helicase
Orig transcript idgnl|cribi|Naga_100015g50.6386.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:740500..740502 +
CM002460.1supercontigCM002460.1:740703..743522 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0008026ATP-dependent helicase activity
GO:0003676nucleic acid binding
GO:0003677DNA binding
GO:0004003ATP-dependent DNA helicase activity
GO:0005524ATP binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009416response to light stimulus
GO:0006259DNA metabolic process
GO:0009058biosynthetic process
GO:0016043cellular component organization
GO:0006139nucleobase-containing compound metabolic process
GO:0006289nucleotide-excision repair
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3
IPR002464DNA/RNA_helicase_DEAH_CS
IPR010643DUF1227
IPR013020DNA_helicase_DNA-repair_Rad3
IPR010614DEAD_2
IPR027417P-loop_NTPase
IPR006554Helicase-like_DEXD_c2
IPR006555ATP-dep_Helicase_C
IPR001945XPGD_DNA_repair
Homology
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|585109837|gb|EWM27570.1| (DNA repair helicase [Nannochloropsis gaditana])

HSP 1 Score: 1935.23 bits (5012), Expect = 0.000e+0
Identity = 940/940 (100.00%), Postives = 940/940 (100.00%), Query Frame = 0
Query:    1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGSAMEVEQTRDVS 940
            MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGSAMEVEQTRDVS
Sbjct:    1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGSAMEVEQTRDVS 940          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|553177882|ref|XP_005852505.1| (DNA excision repair protein ERCC-2, partial [Nannochloropsis gaditana CCMP526] >gi|422296028|gb|EKU23327.1| DNA excision repair protein ERCC-2, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1909.03 bits (4944), Expect = 0.000e+0
Identity = 927/929 (99.78%), Postives = 928/929 (99.89%), Query Frame = 0
Query:    1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGS 929
            MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGG G+
Sbjct:    1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGRGA 929          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|224001022|ref|XP_002290183.1| (nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana CCMP1335] >gi|220973605|gb|EED91935.1| nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0
Identity = 480/764 (62.83%), Postives = 598/764 (78.27%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWV-----RQRGATSANV-ELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQK-----QSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEG---FTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILL 751
            +RF+L+GLD+FFPYDR+Y EQY YM  LK+ LDA GHCLLEMPTGTGKTVCL+SLITSYQ A+P  GKL+YCTRTVPEM   +EE+  V+ YR + +GA G  VLA+CLSSRRN+CIHERV+ ESDRE +D+ACRSMTA W      + R   SA V E C+YY+ ++  G    +  G+Y L++L++ GK++ WCPY+L R  INHA++L++NYQY+LDPKVA +VSKELE+ESI+VFDEAHNID+VCIEALSV++ ER+L++ATR LG+LS+EVS++K  D  +L  EYQ LV GL + G L   A A   +S   +         PD +  EAVPGNIRRAEHF+ FMKK+VEHLKT LR  S  +     ++PLAFLH + T T+LE KPL+F YSRL+SLLRTL+V +LD+FN L DVADFA+LVATYAEG   F +I EP GSSIPG   PV+QL+CLDASLAI P+F+RF SV+ITSGTLSP+DLYP LL F P V +S +MS FR  I PLV+T+GS Q  ++T+F+ RDD  V R+YG +LVE+ + +PDGVV FFTSYSYME ++ EW+  GILRQ+ + KL+FIETKDVVETTLALDN+RRACDSGRGA+FLSVARGKV+EGI+FDRHYGRAVI+ GVPFQYTLS ++R RLEYLQT + I   DFL FDA+RQA+QCVGRVIRSK+DYGLMIFADSRYNR+DKR+KLPKWIL  +G   L+LST  A+ +V+ FL+ MAQP+D   L+++LL
Sbjct:    1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGA-GSGVLALCLSSRRNMCIHERVLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVDQGLLDAPAAAVGLSSNVLS---------PDVI-NEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLVATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPIDLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNALKEVLL 753          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|1072227657|gb|OEU12396.1| (DNA repair helicase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 989.564 bits (2557), Expect = 0.000e+0
Identity = 471/754 (62.47%), Postives = 589/754 (78.12%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKV-LAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATS--ANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDS-----TQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEG---FTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGK 744
            +RFDLDGLD+FFPYDR+Y EQ+ YM  LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQFA+P VGKL+YCTRTVPEM   VEE+  V+ YR + +  +  +   A+CLSSRRN+CI+ERVM ESDREAVD+ACRSMTASWV +    +  + +E C Y++ +++ G    +  G+Y L++LK+ G+ R WCPY+LAR  INHAN+L++NYQY+LDPKVA +VSKELEAESIVVFDEAHNID+VCIEALSV+++ER L++ATR LG+LS+EVS++K  D  +LN EYQ LV GL + G L       S  S   A         PD L  E+VPGNIRRAEHF+ FMKKVVEHLK  L+  +        ++PLAFLH +   T+LE KPLRF YSRLNSLLRTL+V ++D+FN L DVADF+TL+ATY+EG   F +I EP GS IPG   P +QLSCLD+SLAI P+F+RF SVIITSGTLSP+DLYP LL F P + +S++MS FR  I PLV+T+GS Q  ++T++E R+D  V R+YG +LV++ + +PDGVV FFTSYSYME++V EW+  G+LR + + KL+FIETKDVVETTLALDN+RRACDSGRGA+FLSVARGKV+EGI+FDRHYGRAVI+ GVPFQYTLS V+R RLE+LQT + I  +DFL FDA+RQ AQCVGRVIRSK DYGLMI ADSRYNR+DKR+KLPKWIL  +G  +L+LST  A+ +V++FL+ M QP+D K
Sbjct:    1 MRFDLDGLDVFFPYDRIYMEQFQYMRSLKQSLDAGGHCLLEMPTGTGKTVCLLSLITSYQFANPSVGKLVYCTRTVPEMNSVVEELGTVLSYRAEQLQLQRQEQGTALCLSSRRNMCINERVMGESDREAVDAACRSMTASWVVEHAKQNPASKIETCDYFDNFQEAGEATTMPSGVYDLEELKKWGQSRSWCPYYLARQAINHANVLVFNYQYMLDPKVAKMVSKELEAESIVVFDEAHNIDSVCIEALSVKINERGLEQATRSLGRLSSEVSRVKASDNQRLNREYQNLVNGLIDQGLLDAPTNDSSLGSNVLA---------PDVL-NESVPGNIRRAEHFIQFMKKVVEHLKNRLKSITGPNGGVHSETPLAFLHRMTNGTSLEAKPLRFAYSRLNSLLRTLQVANMDDFNSLGDVADFSTLLATYSEGVAKFAIIMEPNGSIIPGASDPCIQLSCLDSSLAIAPIFKRFSSVIITSGTLSPIDLYPKLLQFEPCISESLNMSTFRPCIRPLVITRGSDQLAVSTKYEDRNDIGVVRNYGSMLVDLCSVIPDGVVAFFTSYSYMEQLVSEWDATGVLRDLTKAKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHVLRARLEFLQTHYQIREADFLNFDALRQTAQCVGRVIRSKTDYGLMILADSRYNRHDKRSKLPKWILQFLGEGNLNLSTDMALQQVKQFLRLMGQPIDQK 744          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|675206247|ref|XP_008912008.1| (hypothetical protein PPTG_15538 [Phytophthora parasitica INRA-310] >gi|566014313|gb|ETI37224.1| hypothetical protein F443_16754 [Phytophthora parasitica P1569] >gi|567951753|gb|ETK77446.1| hypothetical protein L915_16288 [Phytophthora parasitica] >gi|567980430|gb|ETL30893.1| hypothetical protein L916_16183 [Phytophthora parasitica] >gi|568009938|gb|ETL84132.1| hypothetical protein L917_15995 [Phytophthora parasitica] >gi|568039839|gb|ETM37313.1| hypothetical protein L914_16111 [Phytophthora parasitica] >gi|568087926|gb|ETN02793.1| hypothetical protein PPTG_15538 [Phytophthora parasitica INRA-310] >gi|570318019|gb|ETO65967.1| hypothetical protein F444_16765 [Phytophthora parasitica P1976] >gi|570941820|gb|ETP07077.1| hypothetical protein F441_16586 [Phytophthora parasitica CJ01A1] >gi|570972212|gb|ETP35170.1| hypothetical protein F442_16582 [Phytophthora parasitica P10297])

HSP 1 Score: 982.245 bits (2538), Expect = 0.000e+0
Identity = 468/793 (59.02%), Postives = 602/793 (75.91%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGA----TSAN------------VELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAA-----SPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
            ++ D+DGL++ FPY+R+Y EQ  YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKLIYCTRTVPEM KCVEE++K+I YR +  G +  +V AVCLSSRRN+C+H RVM  +D E VD  CR MTASWVR R A    T+A+            VE C +YE Y+ +   D  +  G+YS+DDLKELG  +GWCPYFL R+++  A++++YNYQY+LDPKV+ LVS+  E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L  LS++V+K+KQ D ++L+ EY+RLV GL  S A+   +    A      +  D M+ANPV  LPD +  EA+PGNIRRAEHF+ FM++++E+L+  +RV   + ++P AFLH+L     +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP  S+  G+  PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q  ++T+F+ RDD SV R+YG LL+E+A   PDG+VCFF SY YME+++ +W+  G+L+++L  KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS  +R RLEYL+    I   DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WI   +  +HL+LS   A+   +++L  MAQP+D    +  ILLD   +A+    H +  + +Q
Sbjct:    1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLIYCTRTVPEMAKCVEEIKKLIKYREQYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKARETAADGDVTMSEEPVREVETCSFYENYDARKSNDTVLPPGVYSVDDLKELGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQRIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 789          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|970645730|gb|KUF86113.1| (DNA repair helicase UVH6 [Phytophthora nicotianae])

HSP 1 Score: 981.089 bits (2535), Expect = 0.000e+0
Identity = 467/793 (58.89%), Postives = 601/793 (75.79%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGA----TSAN------------VELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAA-----SPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
            ++ D+DGL++ FPY+R+Y EQ  YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKLIYCTRTVPEM KCVEE++K+I YR +  G +  +V AVCLSSRRN+C+H RVM  +D E VD  CR MTASWVR R A    T+A+            VE C +YE Y+ +   D  +  G+YS+DDLKELG  +GWCPYFL R+++  A++++YNYQY+LDPKV+ LVS+  E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L  LS++V+K+KQ D ++L+ EY+RLV GL  S A+   +    A      +  D M+ANPV  LPD +  EA+PGNIRRAEHF+ FM++++E+L+  +RV   + ++P  FLH+L     +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP  S+  G+  PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q  ++T+F+ RDD SV R+YG LL+E+A   PDG+VCFF SY YME+++ +W+  G+L+++L  KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS  +R RLEYL+    I   DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WI   +  +HL+LS   A+   +++L  MAQP+D    +  ILLD   +A+    H +  + +Q
Sbjct:    1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLIYCTRTVPEMAKCVEEIKKLIKYREQYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKARETAADGDVTMSEEPVREVETCSFYENYDARKSNDTVLPPGVYSVDDLKELGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQRIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQVFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 789          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|1173956500|gb|OQS03268.1| (TFIIH basal transcription factor complex helicase subunit, partial [Thraustotheca clavata])

HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0
Identity = 456/760 (60.00%), Postives = 593/760 (78.03%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEV-GKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAH-GIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPM-DGKELQKILLDETRIAE 758
            +R +++G+++ FPY R+Y EQ  YM ELKRALDAKGH +LEMPTGTGKTV L+SL+ SY+FAHP+  GKLIYCTRTVPEM KCVEE++ V+ YR + +G     + AVCLSSRRN+C+H RVM  +D EAVD+ CR MTASWVR + AT   +E C +YE+YE    D  +   G+Y+LDDLK LG ++GWCPYF+ RH +  A++++YNYQY+LDPKV+G+VS+ LE + IVVFDEAHNIDNVCIEALSV L++R LD+A+R L  +ST VS+MKQ D  +L+ EY+RLV GL  SG + G       A+  D  LA PV  LP+ + +EA+PG+IRRAEHF+ FM++V+E+L+T + V + + ++P AFLH +QT  A++ KP++F YSRL SLLRTLE+T+L+EFN L  VADFATLVATYA+GF +I EP         QP+LQL+CLDASLA++PVFERF +V++TSGTLSP+DLYP LL+F+PVVR+S+ MS++R  ICPLV+T+GS Q  ++T+F+ RDD SV R+YG LL+E+A  VPDG+VCFF SY YME ++ +W+  G+L+++L  KLIFIETKD+VETTLALDNF+RACD GRGA+FLSVARGKVAEGIDFDRHYGRAV+L G+PFQYTLS V+R RLEYL+   HI   DFLTFDA+RQAAQC GRVIRSK DYG+++FADSRYNR+DKR+KLP WI   +  +HL+LS   A+   +++L  MAQP+ +G  +  ILLDE  +A+
Sbjct:  214 MRLEIEGMEVLFPYPRVYAEQVTYMRELKRALDAKGHAMLEMPTGTGKTVALLSLVLSYKFAHPQTTGKLIYCTRTVPEMSKCVEEIKHVMAYRAEVLGEASSGITAVCLSSRRNMCVHPRVMANADGEAVDAQCRQMTASWVRSQAATR-KLETCSFYEQYESRSMDQRVLDTGVYTLDDLKALGTEKGWCPYFMTRHALAFADVIVYNYQYMLDPKVSGMVSRSLEKDCIVVFDEAHNIDNVCIEALSVTLNKRGLDRASRNLTTISTTVSRMKQADKARLDTEYRRLVEGLRSSGTVMGQNAQEENATSTDGTLAAPV--LPNDILEEAIPGSIRRAEHFIAFMRRVIEYLRTRIGVRNVESETPAAFLHAMQTAIAVDTKPMKFCYSRLQSLLRTLEITNLEEFNALNQVADFATLVATYADGFMLILEPTDEF--NAPQPILQLACLDASLAMRPVFERFSTVVLTSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPLVITRGSDQMPVSTKFDLRDDMSVVRNYGGLLLEMAACVPDGMVCFFPSYMYMENIIAQWDTLGVLKKVLAHKLIFIETKDIVETTLALDNFKRACDIGRGAVFLSVARGKVAEGIDFDRHYGRAVLLFGIPFQYTLSNVLRARLEYLRYTHHIREGDFLTFDALRQAAQCAGRVIRSKADYGIIVFADSRYNRHDKRSKLPPWINQFLLESHLNLSVDMAVFMSKKYLSLMAQPVEEGTNMNSILLDEPAVAK 968          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|970654927|gb|KUF93166.1| (hypothetical protein AM588_10005635 [Phytophthora nicotianae])

HSP 1 Score: 979.548 bits (2531), Expect = 0.000e+0
Identity = 466/793 (58.76%), Postives = 601/793 (75.79%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGA----TSAN------------VELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAA-----SPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
            ++ D+DGL++ FPY+R+Y EQ  YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKLIYCTRTVPEM KCVEE++K+I YR +  G +  +V AVCLSSRRN+C+H RVM  +D E VD  CR MTASWVR R A    T+A+            VE C +YE Y+ +   D  +  G+YS+DDLKELG  +GWCPYFL R+++  A++++YNYQY+LDPKV+ LVS+  E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L  LS++V+K+KQ D ++L+ EY+RLV GL  S A+   +    A      +  D M+ANPV  LPD +  EA+PGNIRRAEHF+ F+++++E+L+  +RV   + ++P  FLH+L     +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP  S+  G+  PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q  ++T+F+ RDD SV R+YG LL+E+A   PDG+VCFF SY YME+++ +W+  G+L+++L  KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS  +R RLEYL+    I   DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WI   +  +HL+LS   A+   +++L  MAQP+D    +  ILLD   +A+    H +  + +Q
Sbjct:    1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLIYCTRTVPEMAKCVEEIKKLIKYREQYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKARETAADGDVTMSEEPVREVETCSFYENYDARKSNDTVLPPGVYSVDDLKELGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQRIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFIRRLIEYLRQRIRVRQVESETPQVFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 789          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|301097762|ref|XP_002897975.1| (TFIIH basal transcription factor complex helicase subunit [Phytophthora infestans T30-4] >gi|262106420|gb|EEY64472.1| TFIIH basal transcription factor complex helicase subunit [Phytophthora infestans T30-4])

HSP 1 Score: 977.237 bits (2525), Expect = 0.000e+0
Identity = 463/777 (59.59%), Postives = 594/777 (76.45%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPA-----DAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
            ++ D+DGL++ FPY+R+Y EQ  YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP  GKL+YCTRTVPEM KCVEE++K+I YR    G +  +V AVCLSSRRN+C+H RVM  +D E VD  CR MTASWV          E C +YE Y+ +   D  +  G+YS+DDLKELG  +GWCPYFL R+++  A++++YNYQY+LDPKV+ LVS+  E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L  LS +V+K+KQ D ++L+ EY+RLV GL  S A+   +    A + A     D M+ANPV  LPD +  EA+PGNIRRAEHF+ FM++++E+L+  +RV   + ++P AFLH+L     +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP  S+  G+  PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q  ++T+F+ RDD SV R+YG LL+E+A   PDG+VCFF SY YME+++ +W+  G+L+++L  KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS  +R RLEYL+    I   DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WIL  +  +HL+LS   A+   +++L  MAQP+D    +  ILLD   +A+    H +  + +Q
Sbjct:    1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLVYCTRTVPEMAKCVEEIKKLIKYREHYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWV----------ETCSFYENYDARKSNDTVLPPGVYSVDDLKELGVKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSGQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQAIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLSSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWILQFLVNSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 763          
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|219112193|ref|XP_002177848.1| (xeroderma pigmentosum group D complementing protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410733|gb|EEC50662.1| xeroderma pigmentosum group D complementing protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0
Identity = 477/792 (60.23%), Postives = 590/792 (74.49%), Query Frame = 0
Query:    2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVL----------------AVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGAT-SANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDS-----TQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEG---FTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQ 768
            +RFDLDGLD+FFPYDR+Y EQ+ YM  LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQFA+P  GKL+YCTRTVPEM   +EE+  V+ YR + +     + +                 +CLSSRRN+C+HERVM ESDREAVD+ACRS+TASWV +       ++E C YY+ +   G    +  G+Y L++L++ GK RGWCPY+L R  INHANIL++NYQY+LDPKVA +VSKELEAESIVVFDEAHNID+VCIEALSV +++R L++ATR LG+LS+EVS++K  D  +L  EYQ LV GL + G L   A         DA L + V   PD L  EAVPGNIRRAEHF+ FMKKVVEHLK  LR  +      + ++PLAFLH +   T+LE KPLRF YSRL+SLLRTL+V++LD+FN L DVADF++L+A Y+EG   F +I EP GSSIPG   PV+QL CLD+SLAI P+F+RF SVIITSGTLSP+DLYP LL F P V +S+ MS FR  I PLV+TKGS Q  ++T++E R D  V R+YG +LVE+ + +PDGVV FFTSYSYME ++ EW+  GILR++ + KL+FIETKDVVETTLALDN+RRACD GRGA+FLSVARGKV+EGI+FDRHYGRAVI+ GVPFQYTLS  +R RLEYLQT + I   DFL FDA+RQA+QCVGRVIRSK DYGLMIFADSRYNR+DKR+KLPKWI   M  + L+LST  A+  V++FL+ M QP+D + LQ  L   + + E    H   L+
Sbjct:    1 MRFDLDGLDVFFPYDRIYLEQHQYMRALKQSLDAGGHCLLEMPTGTGKTVCLLSLITSYQFANPSAGKLVYCTRTVPEMNHVMEELATVLAYRSQELQRHQEENILPMDTDGDIENVPVAGTLCLSSRRNMCVHERVMAESDREAVDAACRSLTASWVLEEAQKRPGSIETCSYYDNFHAAGESTSMPSGVYDLEELQKWGKRRGWCPYYLTRQAINHANILVFNYQYMLDPKVAKMVSKELEAESIVVFDEAHNIDSVCIEALSVTINDRGLEQATRSLGRLSSEVSRLKASDNQRLQTEYQNLVNGLIDQGLLDAPAN--------DAGLTSNVLN-PDVL-NEAVPGNIRRAEHFIGFMKKVVEHLKARLRSVAGPNGGVRSETPLAFLHRMTNGTSLEAKPLRFAYSRLSSLLRTLQVSNLDDFNSLTDVADFSSLLAAYSEGVAKFAIIMEPNGSSIPGATDPVIQLVCLDSSLAIAPLFKRFGSVIITSGTLSPIDLYPKLLQFEPCVSESLSMSTFRPCIRPLVITKGSDQLAVSTKYEDRGDMGVIRNYGTMLVELCSTIPDGVVAFFTSYSYMESLISEWDAIGILRELTKSKLVFIETKDVVETTLALDNYRRACDCGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHTLRARLEYLQTHYQIREQDFLNFDAIRQASQCVGRVIRSKTDYGLMIFADSRYNRHDKRSKLPKWIQQFMSDHFLNLSTDMALSHVKQFLRLMGQPIDQEALQSNLPSLSVVPEKDRAHPEQLR 782          
The following BLAST results are available for this feature:
BLAST of EWM27570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109837|gb|EWM27570.1|0.000e+0100.00DNA repair helicase [Nannochloropsis gaditana][more]
gi|553177882|ref|XP_005852505.1|0.000e+099.78DNA excision repair protein ERCC-2, partial [Nanno... [more]
gi|224001022|ref|XP_002290183.1|0.000e+062.83nucleotide excision repair protein ERCC2 [Thalassi... [more]
gi|1072227657|gb|OEU12396.1|0.000e+062.47DNA repair helicase [Fragilariopsis cylindrus CCMP... [more]
gi|675206247|ref|XP_008912008.1|0.000e+059.02hypothetical protein PPTG_15538 [Phytophthora para... [more]
gi|970645730|gb|KUF86113.1|0.000e+058.89DNA repair helicase UVH6 [Phytophthora nicotianae][more]
gi|1173956500|gb|OQS03268.1|0.000e+060.00TFIIH basal transcription factor complex helicase ... [more]
gi|970654927|gb|KUF93166.1|0.000e+058.76hypothetical protein AM588_10005635 [Phytophthora ... [more]
gi|301097762|ref|XP_002897975.1|0.000e+059.59TFIIH basal transcription factor complex helicase ... [more]
gi|219112193|ref|XP_002177848.1|0.000e+060.23xeroderma pigmentosum group D complementing protei... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3112rna3112Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications