EWM27570.1, cds3104 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|585109837|gb|EWM27570.1| (DNA repair helicase [Nannochloropsis gaditana]) HSP 1 Score: 1935.23 bits (5012), Expect = 0.000e+0 Identity = 940/940 (100.00%), Postives = 940/940 (100.00%), Query Frame = 0
Query: 1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGSAMEVEQTRDVS 940
MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGSAMEVEQTRDVS
Sbjct: 1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGSAMEVEQTRDVS 940
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|553177882|ref|XP_005852505.1| (DNA excision repair protein ERCC-2, partial [Nannochloropsis gaditana CCMP526] >gi|422296028|gb|EKU23327.1| DNA excision repair protein ERCC-2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1909.03 bits (4944), Expect = 0.000e+0 Identity = 927/929 (99.78%), Postives = 928/929 (99.89%), Query Frame = 0
Query: 1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGEGS 929
MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGG G+
Sbjct: 1 MVRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQGLQARNKGATLGVAGAAALPSLTQGGTGGGAGGRGSVDGKVGGGGGAAAGVVGGGVAVHGPGARREEQAGDDVAAIERGALIREEEEERRRVREEAEAMRQDAEDEAWLERADVEEGQDAAVDMEEEREREKEAPVSMPQQEMGQKGQEKKREVDLGGRGA 929
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|224001022|ref|XP_002290183.1| (nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana CCMP1335] >gi|220973605|gb|EED91935.1| nucleotide excision repair protein ERCC2 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 1003.82 bits (2594), Expect = 0.000e+0 Identity = 480/764 (62.83%), Postives = 598/764 (78.27%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWV-----RQRGATSANV-ELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQK-----QSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEG---FTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILL 751
+RF+L+GLD+FFPYDR+Y EQY YM LK+ LDA GHCLLEMPTGTGKTVCL+SLITSYQ A+P GKL+YCTRTVPEM +EE+ V+ YR + +GA G VLA+CLSSRRN+CIHERV+ ESDRE +D+ACRSMTA W + R SA V E C+YY+ ++ G + G+Y L++L++ GK++ WCPY+L R INHA++L++NYQY+LDPKVA +VSKELE+ESI+VFDEAHNID+VCIEALSV++ ER+L++ATR LG+LS+EVS++K D +L EYQ LV GL + G L A A +S + PD + EAVPGNIRRAEHF+ FMKK+VEHLKT LR S + ++PLAFLH + T T+LE KPL+F YSRL+SLLRTL+V +LD+FN L DVADFA+LVATYAEG F +I EP GSSIPG PV+QL+CLDASLAI P+F+RF SV+ITSGTLSP+DLYP LL F P V +S +MS FR I PLV+T+GS Q ++T+F+ RDD V R+YG +LVE+ + +PDGVV FFTSYSYME ++ EW+ GILRQ+ + KL+FIETKDVVETTLALDN+RRACDSGRGA+FLSVARGKV+EGI+FDRHYGRAVI+ GVPFQYTLS ++R RLEYLQT + I DFL FDA+RQA+QCVGRVIRSK+DYGLMIFADSRYNR+DKR+KLPKWIL +G L+LST A+ +V+ FL+ MAQP+D L+++LL
Sbjct: 1 MRFNLEGLDVFFPYDRIYLEQYQYMRALKQTLDAGGHCLLEMPTGTGKTVCLLSLITSYQLANPNCGKLVYCTRTVPEMNSVMEELGTVLAYRSEQLGA-GSGVLALCLSSRRNMCIHERVLRESDREGIDAACRSMTAPWAIEKAQKARQQQSAQVVETCEYYDGFQSAGEATSMPSGVYDLEELRKWGKNKNWCPYYLTRQAINHASVLVFNYQYMLDPKVAKMVSKELESESIIVFDEAHNIDSVCIEALSVDIHERNLEQATRSLGRLSSEVSRIKASDGARLQAEYQNLVNGLVDQGLLDAPAAAVGLSSNVLS---------PDVI-NEAVPGNIRRAEHFIAFMKKIVEHLKTRLRAVSGPRGGVISETPLAFLHRMITTTSLEAKPLKFAYSRLSSLLRTLQVPNLDDFNALTDVADFASLVATYAEGLPRFAIIMEPNGSSIPGALDPVIQLACLDASLAIAPLFKRFGSVVITSGTLSPIDLYPKLLQFEPCVSESFNMSTFRPCIRPLVITRGSDQLPVSTKFDDRDDMGVVRNYGSMLVELCSSIPDGVVAFFTSYSYMESIISEWDGMGILRQLTKSKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHILRARLEYLQTHYQIREQDFLNFDALRQASQCVGRVIRSKIDYGLMIFADSRYNRHDKRSKLPKWILQFLGDGQLNLSTDTAIAQVKHFLRVMAQPVDQNALKEVLL 753
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|1072227657|gb|OEU12396.1| (DNA repair helicase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 989.564 bits (2557), Expect = 0.000e+0 Identity = 471/754 (62.47%), Postives = 589/754 (78.12%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKV-LAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATS--ANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDS-----TQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEG---FTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGK 744
+RFDLDGLD+FFPYDR+Y EQ+ YM LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQFA+P VGKL+YCTRTVPEM VEE+ V+ YR + + + + A+CLSSRRN+CI+ERVM ESDREAVD+ACRSMTASWV + + + +E C Y++ +++ G + G+Y L++LK+ G+ R WCPY+LAR INHAN+L++NYQY+LDPKVA +VSKELEAESIVVFDEAHNID+VCIEALSV+++ER L++ATR LG+LS+EVS++K D +LN EYQ LV GL + G L S S A PD L E+VPGNIRRAEHF+ FMKKVVEHLK L+ + ++PLAFLH + T+LE KPLRF YSRLNSLLRTL+V ++D+FN L DVADF+TL+ATY+EG F +I EP GS IPG P +QLSCLD+SLAI P+F+RF SVIITSGTLSP+DLYP LL F P + +S++MS FR I PLV+T+GS Q ++T++E R+D V R+YG +LV++ + +PDGVV FFTSYSYME++V EW+ G+LR + + KL+FIETKDVVETTLALDN+RRACDSGRGA+FLSVARGKV+EGI+FDRHYGRAVI+ GVPFQYTLS V+R RLE+LQT + I +DFL FDA+RQ AQCVGRVIRSK DYGLMI ADSRYNR+DKR+KLPKWIL +G +L+LST A+ +V++FL+ M QP+D K
Sbjct: 1 MRFDLDGLDVFFPYDRIYMEQFQYMRSLKQSLDAGGHCLLEMPTGTGKTVCLLSLITSYQFANPSVGKLVYCTRTVPEMNSVVEELGTVLSYRAEQLQLQRQEQGTALCLSSRRNMCINERVMGESDREAVDAACRSMTASWVVEHAKQNPASKIETCDYFDNFQEAGEATTMPSGVYDLEELKKWGQSRSWCPYYLARQAINHANVLVFNYQYMLDPKVAKMVSKELEAESIVVFDEAHNIDSVCIEALSVKINERGLEQATRSLGRLSSEVSRVKASDNQRLNREYQNLVNGLIDQGLLDAPTNDSSLGSNVLA---------PDVL-NESVPGNIRRAEHFIQFMKKVVEHLKNRLKSITGPNGGVHSETPLAFLHRMTNGTSLEAKPLRFAYSRLNSLLRTLQVANMDDFNSLGDVADFSTLLATYSEGVAKFAIIMEPNGSIIPGASDPCIQLSCLDSSLAIAPIFKRFSSVIITSGTLSPIDLYPKLLQFEPCISESLNMSTFRPCIRPLVITRGSDQLAVSTKYEDRNDIGVVRNYGSMLVDLCSVIPDGVVAFFTSYSYMEQLVSEWDATGVLRDLTKAKLVFIETKDVVETTLALDNYRRACDSGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHVLRARLEFLQTHYQIREADFLNFDALRQTAQCVGRVIRSKTDYGLMILADSRYNRHDKRSKLPKWILQFLGEGNLNLSTDMALQQVKQFLRLMGQPIDQK 744
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|675206247|ref|XP_008912008.1| (hypothetical protein PPTG_15538 [Phytophthora parasitica INRA-310] >gi|566014313|gb|ETI37224.1| hypothetical protein F443_16754 [Phytophthora parasitica P1569] >gi|567951753|gb|ETK77446.1| hypothetical protein L915_16288 [Phytophthora parasitica] >gi|567980430|gb|ETL30893.1| hypothetical protein L916_16183 [Phytophthora parasitica] >gi|568009938|gb|ETL84132.1| hypothetical protein L917_15995 [Phytophthora parasitica] >gi|568039839|gb|ETM37313.1| hypothetical protein L914_16111 [Phytophthora parasitica] >gi|568087926|gb|ETN02793.1| hypothetical protein PPTG_15538 [Phytophthora parasitica INRA-310] >gi|570318019|gb|ETO65967.1| hypothetical protein F444_16765 [Phytophthora parasitica P1976] >gi|570941820|gb|ETP07077.1| hypothetical protein F441_16586 [Phytophthora parasitica CJ01A1] >gi|570972212|gb|ETP35170.1| hypothetical protein F442_16582 [Phytophthora parasitica P10297]) HSP 1 Score: 982.245 bits (2538), Expect = 0.000e+0 Identity = 468/793 (59.02%), Postives = 602/793 (75.91%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGA----TSAN------------VELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAA-----SPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
++ D+DGL++ FPY+R+Y EQ YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKLIYCTRTVPEM KCVEE++K+I YR + G + +V AVCLSSRRN+C+H RVM +D E VD CR MTASWVR R A T+A+ VE C +YE Y+ + D + G+YS+DDLKELG +GWCPYFL R+++ A++++YNYQY+LDPKV+ LVS+ E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L LS++V+K+KQ D ++L+ EY+RLV GL S A+ + A + D M+ANPV LPD + EA+PGNIRRAEHF+ FM++++E+L+ +RV + ++P AFLH+L +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP S+ G+ PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q ++T+F+ RDD SV R+YG LL+E+A PDG+VCFF SY YME+++ +W+ G+L+++L KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS +R RLEYL+ I DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WI + +HL+LS A+ +++L MAQP+D + ILLD +A+ H + + +Q
Sbjct: 1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLIYCTRTVPEMAKCVEEIKKLIKYREQYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKARETAADGDVTMSEEPVREVETCSFYENYDARKSNDTVLPPGVYSVDDLKELGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQRIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 789
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|970645730|gb|KUF86113.1| (DNA repair helicase UVH6 [Phytophthora nicotianae]) HSP 1 Score: 981.089 bits (2535), Expect = 0.000e+0 Identity = 467/793 (58.89%), Postives = 601/793 (75.79%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGA----TSAN------------VELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAA-----SPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
++ D+DGL++ FPY+R+Y EQ YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKLIYCTRTVPEM KCVEE++K+I YR + G + +V AVCLSSRRN+C+H RVM +D E VD CR MTASWVR R A T+A+ VE C +YE Y+ + D + G+YS+DDLKELG +GWCPYFL R+++ A++++YNYQY+LDPKV+ LVS+ E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L LS++V+K+KQ D ++L+ EY+RLV GL S A+ + A + D M+ANPV LPD + EA+PGNIRRAEHF+ FM++++E+L+ +RV + ++P FLH+L +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP S+ G+ PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q ++T+F+ RDD SV R+YG LL+E+A PDG+VCFF SY YME+++ +W+ G+L+++L KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS +R RLEYL+ I DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WI + +HL+LS A+ +++L MAQP+D + ILLD +A+ H + + +Q
Sbjct: 1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLIYCTRTVPEMAKCVEEIKKLIKYREQYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKARETAADGDVTMSEEPVREVETCSFYENYDARKSNDTVLPPGVYSVDDLKELGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQRIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQVFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 789
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|1173956500|gb|OQS03268.1| (TFIIH basal transcription factor complex helicase subunit, partial [Thraustotheca clavata]) HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0 Identity = 456/760 (60.00%), Postives = 593/760 (78.03%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEV-GKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYEKNGTDAGIAH-GIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPM-DGKELQKILLDETRIAE 758
+R +++G+++ FPY R+Y EQ YM ELKRALDAKGH +LEMPTGTGKTV L+SL+ SY+FAHP+ GKLIYCTRTVPEM KCVEE++ V+ YR + +G + AVCLSSRRN+C+H RVM +D EAVD+ CR MTASWVR + AT +E C +YE+YE D + G+Y+LDDLK LG ++GWCPYF+ RH + A++++YNYQY+LDPKV+G+VS+ LE + IVVFDEAHNIDNVCIEALSV L++R LD+A+R L +ST VS+MKQ D +L+ EY+RLV GL SG + G A+ D LA PV LP+ + +EA+PG+IRRAEHF+ FM++V+E+L+T + V + + ++P AFLH +QT A++ KP++F YSRL SLLRTLE+T+L+EFN L VADFATLVATYA+GF +I EP QP+LQL+CLDASLA++PVFERF +V++TSGTLSP+DLYP LL+F+PVVR+S+ MS++R ICPLV+T+GS Q ++T+F+ RDD SV R+YG LL+E+A VPDG+VCFF SY YME ++ +W+ G+L+++L KLIFIETKD+VETTLALDNF+RACD GRGA+FLSVARGKVAEGIDFDRHYGRAV+L G+PFQYTLS V+R RLEYL+ HI DFLTFDA+RQAAQC GRVIRSK DYG+++FADSRYNR+DKR+KLP WI + +HL+LS A+ +++L MAQP+ +G + ILLDE +A+
Sbjct: 214 MRLEIEGMEVLFPYPRVYAEQVTYMRELKRALDAKGHAMLEMPTGTGKTVALLSLVLSYKFAHPQTTGKLIYCTRTVPEMSKCVEEIKHVMAYRAEVLGEASSGITAVCLSSRRNMCVHPRVMANADGEAVDAQCRQMTASWVRSQAATR-KLETCSFYEQYESRSMDQRVLDTGVYTLDDLKALGTEKGWCPYFMTRHALAFADVIVYNYQYMLDPKVSGMVSRSLEKDCIVVFDEAHNIDNVCIEALSVTLNKRGLDRASRNLTTISTTVSRMKQADKARLDTEYRRLVEGLRSSGTVMGQNAQEENATSTDGTLAAPV--LPNDILEEAIPGSIRRAEHFIAFMRRVIEYLRTRIGVRNVESETPAAFLHAMQTAIAVDTKPMKFCYSRLQSLLRTLEITNLEEFNALNQVADFATLVATYADGFMLILEPTDEF--NAPQPILQLACLDASLAMRPVFERFSTVVLTSGTLSPIDLYPRLLNFSPVVRESLPMSVYRSCICPLVITRGSDQMPVSTKFDLRDDMSVVRNYGGLLLEMAACVPDGMVCFFPSYMYMENIIAQWDTLGVLKKVLAHKLIFIETKDIVETTLALDNFKRACDIGRGAVFLSVARGKVAEGIDFDRHYGRAVLLFGIPFQYTLSNVLRARLEYLRYTHHIREGDFLTFDALRQAAQCAGRVIRSKADYGIIVFADSRYNRHDKRSKLPPWINQFLLESHLNLSVDMAVFMSKKYLSLMAQPVEEGTNMNSILLDEPAVAK 968
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|970654927|gb|KUF93166.1| (hypothetical protein AM588_10005635 [Phytophthora nicotianae]) HSP 1 Score: 979.548 bits (2531), Expect = 0.000e+0 Identity = 466/793 (58.76%), Postives = 601/793 (75.79%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGA----TSAN------------VELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAA-----SPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
++ D+DGL++ FPY+R+Y EQ YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKLIYCTRTVPEM KCVEE++K+I YR + G + +V AVCLSSRRN+C+H RVM +D E VD CR MTASWVR R A T+A+ VE C +YE Y+ + D + G+YS+DDLKELG +GWCPYFL R+++ A++++YNYQY+LDPKV+ LVS+ E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L LS++V+K+KQ D ++L+ EY+RLV GL S A+ + A + D M+ANPV LPD + EA+PGNIRRAEHF+ F+++++E+L+ +RV + ++P FLH+L +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP S+ G+ PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q ++T+F+ RDD SV R+YG LL+E+A PDG+VCFF SY YME+++ +W+ G+L+++L KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS +R RLEYL+ I DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WI + +HL+LS A+ +++L MAQP+D + ILLD +A+ H + + +Q
Sbjct: 1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLIYCTRTVPEMAKCVEEIKKLIKYREQYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWVRARAAKARETAADGDVTMSEEPVREVETCSFYENYDARKSNDTVLPPGVYSVDDLKELGAKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSSQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQRIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFIRRLIEYLRQRIRVRQVESETPQVFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLTSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWITQFLVDSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 789
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|301097762|ref|XP_002897975.1| (TFIIH basal transcription factor complex helicase subunit [Phytophthora infestans T30-4] >gi|262106420|gb|EEY64472.1| TFIIH basal transcription factor complex helicase subunit [Phytophthora infestans T30-4]) HSP 1 Score: 977.237 bits (2525), Expect = 0.000e+0 Identity = 463/777 (59.59%), Postives = 594/777 (76.45%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVLAVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGATSANVELCQYYEEYE-KNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPA-----DAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDSTQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEGFTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMD-GKELQKILLDETRIAELTAIHQRGLQGLQ 771
++ D+DGL++ FPY+R+Y EQ YM ELKRALDA+GHC+LEMPTGTGKTV L+SL+ +Y+ AHP GKL+YCTRTVPEM KCVEE++K+I YR G + +V AVCLSSRRN+C+H RVM +D E VD CR MTASWV E C +YE Y+ + D + G+YS+DDLKELG +GWCPYFL R+++ A++++YNYQY+LDPKV+ LVS+ E ESIVVFDEAHNIDNVCIEALSV+LD RSLD+A+R L LS +V+K+KQ D ++L+ EY+RLV GL S A+ + A + A D M+ANPV LPD + EA+PGNIRRAEHF+ FM++++E+L+ +RV + ++P AFLH+L +E+KP++F Y+RLNSLLRTLEVT+L+E+N L DVADFATLVATYAEGF +I EP S+ G+ PVLQLSCLDASLAI+PVFERF SV+ITSGTLSP+DLYP LL+F PV+R+S+ MS++R SICPLV+T+GS Q ++T+F+ RDD SV R+YG LL+E+A PDG+VCFF SY YME+++ +W+ G+L+++L KL+FIETKD+VETTLALDN+++ACD GRGAIF SVARGKVAEGIDFDRHYGRAVIL G+PFQYTLS +R RLEYL+ I DFLTFDA+RQAAQC GRV+RSK DYGL+IFADSRYNR DKRTKLP WIL + +HL+LS A+ +++L MAQP+D + ILLD +A+ H + + +Q
Sbjct: 1 MKVDIDGLEVVFPYERMYSEQLQYMRELKRALDAQGHCMLEMPTGTGKTVSLLSLVLAYKAAHPTAGKLVYCTRTVPEMAKCVEEIKKLIKYREHYYG-DKAQVTAVCLSSRRNMCVHPRVMAHADGEDVDGQCRKMTASWV----------ETCSFYENYDARKSNDTVLPPGVYSVDDLKELGVKKGWCPYFLTRYVVTFADVVVYNYQYMLDPKVSQLVSRSFEKESIVVFDEAHNIDNVCIEALSVDLDRRSLDRASRNLTTLSGQVNKLKQADKSRLDAEYRRLVEGLRSSNAVVAPSYTDPATNQAIDTSNDIMIANPV--LPDDVLDEAIPGNIRRAEHFVAFMRRLIEYLRQRIRVRQVESETPQAFLHHLHQAINMEIKPMKFCYTRLNSLLRTLEVTNLEEYNSLTDVADFATLVATYAEGFMLIIEPFDSA-SGVHDPVLQLSCLDASLAIRPVFERFSSVVITSGTLSPIDLYPRLLNFNPVIRESLPMSVYRSSICPLVITRGSDQMPVSTKFDLRDDLSVVRNYGTLLLEMAACTPDGMVCFFPSYLYMEKIIGQWDSLGVLKRVLSSKLLFIETKDIVETTLALDNYKKACDCGRGAIFFSVARGKVAEGIDFDRHYGRAVILFGIPFQYTLSNTLRARLEYLRYTHQIREGDFLTFDALRQAAQCAGRVLRSKTDYGLVIFADSRYNRADKRTKLPPWILQFLVNSHLNLSVDMAVFMAKKYLSLMAQPVDESTSVNSILLDADGVAKWLGKHPKEDESMQ 763
BLAST of EWM27570.1 vs. NCBI_GenBank
Match: gi|219112193|ref|XP_002177848.1| (xeroderma pigmentosum group D complementing protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410733|gb|EEC50662.1| xeroderma pigmentosum group D complementing protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0 Identity = 477/792 (60.23%), Postives = 590/792 (74.49%), Query Frame = 0
Query: 2 VRFDLDGLDLFFPYDRLYEEQYNYMLELKRALDAKGHCLLEMPTGTGKTVCLISLITSYQFAHPEVGKLIYCTRTVPEMVKCVEEVRKVIDYRVKCIGAEGGKVL----------------AVCLSSRRNLCIHERVMEESDREAVDSACRSMTASWVRQRGAT-SANVELCQYYEEYEKNGTDAGIAHGIYSLDDLKELGKDRGWCPYFLARHIINHANILIYNYQYVLDPKVAGLVSKELEAESIVVFDEAHNIDNVCIEALSVELDERSLDKATRCLGKLSTEVSKMKQKDANKLNEEYQRLVRGLAESGALGGAAGAGSAASPADAMLANPVPRLPDALAQEAVPGNIRRAEHFLTFMKKVVEHLKTLLRVDS-----TQKQSPLAFLHYLQTKTALEVKPLRFTYSRLNSLLRTLEVTHLDEFNPLQDVADFATLVATYAEG---FTVITEPQGSSIPGLRQPVLQLSCLDASLAIKPVFERFKSVIITSGTLSPLDLYPTLLSFTPVVRQSMDMSMFRKSICPLVVTKGSGQQVITTRFEKRDDPSVTRDYGELLVEIATHVPDGVVCFFTSYSYMERVVQEWEDGGILRQILERKLIFIETKDVVETTLALDNFRRACDSGRGAIFLSVARGKVAEGIDFDRHYGRAVILIGVPFQYTLSPVIRERLEYLQTKFHINPSDFLTFDAMRQAAQCVGRVIRSKLDYGLMIFADSRYNRYDKRTKLPKWILDCMGTNHLDLSTGDAMDKVRRFLKEMAQPMDGKELQKILLDETRIAELTAIHQRGLQ 768
+RFDLDGLD+FFPYDR+Y EQ+ YM LK++LDA GHCLLEMPTGTGKTVCL+SLITSYQFA+P GKL+YCTRTVPEM +EE+ V+ YR + + + + +CLSSRRN+C+HERVM ESDREAVD+ACRS+TASWV + ++E C YY+ + G + G+Y L++L++ GK RGWCPY+L R INHANIL++NYQY+LDPKVA +VSKELEAESIVVFDEAHNID+VCIEALSV +++R L++ATR LG+LS+EVS++K D +L EYQ LV GL + G L A DA L + V PD L EAVPGNIRRAEHF+ FMKKVVEHLK LR + + ++PLAFLH + T+LE KPLRF YSRL+SLLRTL+V++LD+FN L DVADF++L+A Y+EG F +I EP GSSIPG PV+QL CLD+SLAI P+F+RF SVIITSGTLSP+DLYP LL F P V +S+ MS FR I PLV+TKGS Q ++T++E R D V R+YG +LVE+ + +PDGVV FFTSYSYME ++ EW+ GILR++ + KL+FIETKDVVETTLALDN+RRACD GRGA+FLSVARGKV+EGI+FDRHYGRAVI+ GVPFQYTLS +R RLEYLQT + I DFL FDA+RQA+QCVGRVIRSK DYGLMIFADSRYNR+DKR+KLPKWI M + L+LST A+ V++FL+ M QP+D + LQ L + + E H L+
Sbjct: 1 MRFDLDGLDVFFPYDRIYLEQHQYMRALKQSLDAGGHCLLEMPTGTGKTVCLLSLITSYQFANPSAGKLVYCTRTVPEMNHVMEELATVLAYRSQELQRHQEENILPMDTDGDIENVPVAGTLCLSSRRNMCVHERVMAESDREAVDAACRSLTASWVLEEAQKRPGSIETCSYYDNFHAAGESTSMPSGVYDLEELQKWGKRRGWCPYYLTRQAINHANILVFNYQYMLDPKVAKMVSKELEAESIVVFDEAHNIDSVCIEALSVTINDRGLEQATRSLGRLSSEVSRLKASDNQRLQTEYQNLVNGLIDQGLLDAPAN--------DAGLTSNVLN-PDVL-NEAVPGNIRRAEHFIGFMKKVVEHLKARLRSVAGPNGGVRSETPLAFLHRMTNGTSLEAKPLRFAYSRLSSLLRTLQVSNLDDFNSLTDVADFSSLLAAYSEGVAKFAIIMEPNGSSIPGATDPVIQLVCLDSSLAIAPLFKRFGSVIITSGTLSPIDLYPKLLQFEPCVSESLSMSTFRPCIRPLVITKGSDQLAVSTKYEDRGDMGVIRNYGTMLVELCSTIPDGVVAFFTSYSYMESLISEWDAIGILRELTKSKLVFIETKDVVETTLALDNYRRACDCGRGAVFLSVARGKVSEGINFDRHYGRAVIMFGVPFQYTLSHTLRARLEYLQTHYQIREQDFLNFDAIRQASQCVGRVIRSKTDYGLMIFADSRYNRHDKRSKLPKWIQQFMSDHFLNLSTDMALSHVKQFLRLMGQPIDQEALQSNLPSLSVVPEKDRAHPEQLR 782 The following BLAST results are available for this feature:
BLAST of EWM27570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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