EWM30643.1, cds31 (CDS) Nannochloropsis gaditana

Overview
NameEWM30643.1
Unique Namecds31
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:100006..100187 +
Alignment locationCM002455.1:100281..100377 +
Alignment locationCM002455.1:100529..100646 +
Alignment locationCM002455.1:101000..101112 +
Alignment locationCM002455.1:101288..101413 +
Alignment locationCM002455.1:101524..101661 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30643.1
Productmethyltransferase type 11
Orig transcript idgnl|cribi|Naga_100652g2.2047.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:100006..100187 +
CM002455.1supercontigCM002455.1:100281..100377 +
CM002455.1supercontigCM002455.1:100529..100646 +
CM002455.1supercontigCM002455.1:101000..101112 +
CM002455.1supercontigCM002455.1:101288..101413 +
CM002455.1supercontigCM002455.1:101524..101661 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|585113330|gb|EWM30643.1| (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 535.028 bits (1377), Expect = 0.000e+0
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query:    1 MVARQHHAVWLLLIASASVNTWGTHAFVGPFPSFSSRSRQLASSYYDGMDYTARRNKEQEKPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEHGTDPSRQDLNTWGARRECPRATSVGVFPPNPSRAWTSPLSSWPSPSSGRRKPPWA 257
            MVARQHHAVWLLLIASASVNTWGTHAFVGPFPSFSSRSRQLASSYYDGMDYTARRNKEQEKPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEHGTDPSRQDLNTWGARRECPRATSVGVFPPNPSRAWTSPLSSWPSPSSGRRKPPWA
Sbjct:    1 MVARQHHAVWLLLIASASVNTWGTHAFVGPFPSFSSRSRQLASSYYDGMDYTARRNKEQEKPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEHGTDPSRQDLNTWGARRECPRATSVGVFPPNPSRAWTSPLSSWPSPSSGRRKPPWA 257          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|612391534|ref|XP_007511288.1| (predicted protein [Bathycoccus prasinos] >gi|424513264|emb|CCO66848.1| predicted protein [Bathycoccus prasinos])

HSP 1 Score: 146.362 bits (368), Expect = 1.928e-38
Identity = 77/148 (52.03%), Postives = 97/148 (65.54%), Query Frame = 0
Query:   57 KEQEKPDWAGGGPISSVVSALINNKFLYN-FMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEHG 203
            +++ KPDWAG   +S  V A I+NKFLY   MK  ARK LID AEK G+ WRE AE L KD RL    +    +  ++M+YP YY +PFHAY +GNL WLAA E ESAT +M LRV+PK+  I   EAQ RLRDSY   +R H +++ 
Sbjct:   20 EDKLKPDWAGDDILSKAVDAAISNKFLYEVIMKPMARKTLIDTAEKNGIKWREVAEELQKDERLQAKFNE---IEISSMEYPEYYLKPFHAYTEGNLCWLAACEAESATYSMALRVYPKER-ITAMEAQQRLRDSYTTTLRDHREKYN 163          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|308810314|ref|XP_003082466.1| (CMV 1a interacting protein 1 (ISS) [Ostreococcus tauri] >gi|116060934|emb|CAL57412.1| Methyltransferase type 11 [Ostreococcus tauri])

HSP 1 Score: 142.895 bits (359), Expect = 7.942e-37
Identity = 75/150 (50.00%), Postives = 97/150 (64.67%), Query Frame = 0
Query:   55 RNKEQEKPDWAGGGPISSVVSALINNKFLY-NFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEHG 203
            R + + KPDWAG   +S +V A I+N+ LY N MK  AR+ LI+ AEK G+AWRE+A+AL  +   P+  +    +   ++ YP YY +PFHAY +GNL WLAA E  SAT +M LRVWPKD  I  E AQ RLRDSY   IR+H + H 
Sbjct:   50 RAESKLKPDWAGDDVLSKLVDAAISNELLYENVMKPMARRTLINTAEKNGIAWREEAKALEAN---PDIHAAFESIKDDSLKYPEYYLKPFHAYAEGNLCWLAATEARSATYSMALRVWPKDR-ITAETAQQRLRDSYTDTIRKHRETHN 195          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|1199291615|gb|OUS46707.1| (CMV 1a interacting protein 1 [Ostreococcus tauri])

HSP 1 Score: 142.124 bits (357), Expect = 2.938e-36
Identity = 78/171 (45.61%), Postives = 104/171 (60.82%), Query Frame = 0
Query:   33 SFSSRSRQLASSYYDGMDYTARRNKEQEKPDWAGGGPISSVVSALINNKFLY-NFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEH 202
            S   R+R++A   +        +   + KPDWAG   +S +V A I+N+ LY N MK  AR+ LI+ AEK G+AWRE+A+AL  +   P+  +    +   ++ YP YY +PFHAY +GNL WLAA E  SAT +M LRVWPKD  I  E AQ RLRDSY   IR+H + H
Sbjct:   61 SLMHRTREIAYEEWRRGALAISQKGSKLKPDWAGDDVLSKLVDAAISNELLYENVMKPMARRTLINTAEKNGIAWREEAKALEAN---PDIHAAFESIKDDSLKYPEYYLKPFHAYAEGNLCWLAATEARSATYSMALRVWPKDR-ITAETAQQRLRDSYTDTIRKHRETH 227          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|145353109|ref|XP_001420871.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144581106|gb|ABO99164.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 140.969 bits (354), Expect = 4.018e-36
Identity = 73/152 (48.03%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   52 TARRNKEQEKPDWAGGGPISSVVSALINNKFLY-NFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQEH 202
             AR   E+ KPDWAG   +S +V A I+N+ LY N MK  AR+ LI  AEK G+ WR++A+ L  D R+         +   +++YP YY +PFHAY +GNL WLAA E  SAT +M LRVWPKD  I  E AQ RLRDSY   +R H +++
Sbjct:   37 VARATSEKAKPDWAGDDALSKLVDAAISNELLYENIMKPMARRTLIQTAEKNGIQWRDEAKRLEGDSRVYEAFE---AIKDDSIEYPEYYLKPFHAYSEGNLCWLAATEARSATYSMALRVWPKDR-ITAETAQQRLRDSYTDTVRAHREKY 184          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|255072341|ref|XP_002499845.1| (CMV 1a interacting protein 1 [Micromonas commoda] >gi|226515107|gb|ACO61103.1| CMV 1a interacting protein 1 [Micromonas commoda])

HSP 1 Score: 134.035 bits (336), Expect = 1.453e-33
Identity = 74/151 (49.01%), Postives = 95/151 (62.91%), Query Frame = 0
Query:   58 EQEKPDWAGGGPISSVVSALINNKFLY-NFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQE-HGTDP 206
            ++ KPDWAG   +S VV A I+NK LY   MK  AR+ LI+ AEK GVAWR+ AE L  +  +         + + +++YP YY QPFHAY +GNL W AA E E AT +M LRVWPKD  I  + AQ RLRDSY   +R H+ E +G +P
Sbjct:   43 DKVKPDWAGDDLLSKVVDAAISNKVLYEGIMKPMARRTLINTAEKNGVAWRDIAEELGNEPAVKQAFDE---IENKSVEYPEYYLQPFHAYAEGNLCWQAAVEAEPATYSMALRVWPKDR-ITADAAQKRLRDSYTGALRAHVDEYYGKEP 189          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|1119824696|ref|WP_072717236.1| (class I SAM-dependent methyltransferase [Planktothrix tepida] >gi|1108768407|emb|CUR36124.1| Methyltransferase type 11 [Planktothrix tepida PCC 9214])

HSP 1 Score: 122.479 bits (306), Expect = 1.334e-29
Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   61 KPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQE 201
            KPDWAG   +S +V+ LI  K LYN MK+ AR+VLI  AEK GV WR+  + L  D+     L     V++  + YP YY  PFHAY++GNL WLAA E E AT AM LRVWPK+  I  E A+ RLR S+ + + ++  E
Sbjct:    7 KPDWAGEDFLSQIVNILIQTKPLYNLMKLQARQVLIKTAEKNGVQWRKTCQEL--DKAGAKELLE--SVTNPNIQYPDYYQVPFHAYDEGNLCWLAAFEAEPATKAMGLRVWPKEQ-ITWETAEHRLRSSFHEILGQYCPE 142          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|652402165|ref|WP_026797961.1| (methyltransferase type 11 [Planktothrix rubescens])

HSP 1 Score: 121.709 bits (304), Expect = 2.304e-29
Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   61 KPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQE 201
            KPDWAG   +S +V+ LI  K LY+ MK+ ARKVLI  AEK GV WR+  + L  D      L +   V++  + YP YY  PFHAY++GNL WLAA E E AT AM LRVWPK+  I  E A+ RLR S+ + + ++  E
Sbjct:    6 KPDWAGKDFLSQIVNVLIKTKPLYSLMKLQARKVLIKTAEKNGVQWRKTCQEL--DTSEAKELLK--SVTNPNIKYPDYYQVPFHAYDEGNLCWLAAYEAEPATKAMGLRVWPKEQ-ITWETAEHRLRSSFHEILGQYCPE 141          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|763056337|ref|WP_043938589.1| (SAM-dependent methyltransferase [Planktothrix prolifica] >gi|1108749331|emb|CUR26554.1| Methyltransferase type 11 [Planktothrix rubescens])

HSP 1 Score: 121.709 bits (304), Expect = 2.503e-29
Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   61 KPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQE 201
            KPDWAG   +S +V+ LI  K LY+ MK+ ARKVLI  AEK GV WR+  + L  D      L +   V++  + YP YY  PFHAY++GNL WLAA E E AT AM LRVWPK+  I  E A+ RLR S+ + + ++  E
Sbjct:    7 KPDWAGKDFLSQIVNVLIKTKPLYSLMKLQARKVLIKTAEKNGVQWRKTCQEL--DTSEAKELLK--SVTNPNIKYPDYYQVPFHAYDEGNLCWLAAYEAEPATKAMGLRVWPKEQ-ITWETAEHRLRSSFHEILGQYCPE 142          
BLAST of EWM30643.1 vs. NCBI_GenBank
Match: gi|738958210|ref|WP_036842508.1| (SAM-dependent methyltransferase [Planktothrix agardhii])

HSP 1 Score: 121.709 bits (304), Expect = 2.503e-29
Identity = 68/141 (48.23%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   61 KPDWAGGGPISSVVSALINNKFLYNFMKIGARKVLIDNAEKKGVAWREDAEALLKDRRLPNTLSRHFGVSHATMDYPAYYTQPFHAYEDGNLNWLAAAEVESATSAMCLRVWPKDAGIKPEEAQDRLRDSYQKEIRRHMQE 201
            KPDWAG   +S +V+ LI  K LY+ MK+ ARKVLI  AEK GV WR+  + L  D      L +   V++  + YP YY  PFHAY++GNL WLAA E E AT AM LRVWPK+  I  E A+ RLR S+ + + ++  E
Sbjct:    7 KPDWAGKDFLSQIVNVLIKTKPLYSLMKLQARKVLIKTAEKNGVQWRKTCQEL--DTSEAKELLK--SVTNPNIKYPDYYQVPFHAYDEGNLCWLAAYEAEPATKAMGLRVWPKEQ-ITWETAEHRLRSSFHEILGKYSPE 142          
The following BLAST results are available for this feature:
BLAST of EWM30643.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113330|gb|EWM30643.1|0.000e+0100.00methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|612391534|ref|XP_007511288.1|1.928e-3852.03predicted protein [Bathycoccus prasinos] >gi|42451... [more]
gi|308810314|ref|XP_003082466.1|7.942e-3750.00CMV 1a interacting protein 1 (ISS) [Ostreococcus t... [more]
gi|1199291615|gb|OUS46707.1|2.938e-3645.61CMV 1a interacting protein 1 [Ostreococcus tauri][more]
gi|145353109|ref|XP_001420871.1|4.018e-3648.03predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|255072341|ref|XP_002499845.1|1.453e-3349.01CMV 1a interacting protein 1 [Micromonas commoda] ... [more]
gi|1119824696|ref|WP_072717236.1|1.334e-2948.23class I SAM-dependent methyltransferase [Planktoth... [more]
gi|652402165|ref|WP_026797961.1|2.304e-2948.23methyltransferase type 11 [Planktothrix rubescens][more]
gi|763056337|ref|WP_043938589.1|2.503e-2948.23SAM-dependent methyltransferase [Planktothrix prol... [more]
gi|738958210|ref|WP_036842508.1|2.503e-2948.23SAM-dependent methyltransferase [Planktothrix agar... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna31rna31Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications