EWM27577.1, cds3085 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|585109844|gb|EWM27577.1| (atp-dependent rna helicase dhx29 [Nannochloropsis gaditana]) HSP 1 Score: 2728.74 bits (7072), Expect = 0.000e+0 Identity = 1339/1339 (100.00%), Postives = 1339/1339 (100.00%), Query Frame = 0
Query: 1 MGRREKAEMEARLKDIREQMSELNIVVGQRRREMKTLKEGWQSNGSGRDTDRGETGGGRGALKGKKEQEESTDLDECLTGMFGDEEDEEEMEDKGVDRSSLSGPGSSTQALAKHKEITERSVLGGLFGDDDDSDDTDGSEGAQKGRFSPSTRSSLPPRETAEDSLPALCSLAPPSPDRAIPGVAVEASSKTAPPSTPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKGCVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEEIKAAWKPGSGDDPMNKG 1339
MGRREKAEMEARLKDIREQMSELNIVVGQRRREMKTLKEGWQSNGSGRDTDRGETGGGRGALKGKKEQEESTDLDECLTGMFGDEEDEEEMEDKGVDRSSLSGPGSSTQALAKHKEITERSVLGGLFGDDDDSDDTDGSEGAQKGRFSPSTRSSLPPRETAEDSLPALCSLAPPSPDRAIPGVAVEASSKTAPPSTPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKGCVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEEIKAAWKPGSGDDPMNKG
Sbjct: 1 MGRREKAEMEARLKDIREQMSELNIVVGQRRREMKTLKEGWQSNGSGRDTDRGETGGGRGALKGKKEQEESTDLDECLTGMFGDEEDEEEMEDKGVDRSSLSGPGSSTQALAKHKEITERSVLGGLFGDDDDSDDTDGSEGAQKGRFSPSTRSSLPPRETAEDSLPALCSLAPPSPDRAIPGVAVEASSKTAPPSTPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKGCVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEEIKAAWKPGSGDDPMNKG 1339
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|553183847|ref|XP_005853979.1| (deah (asp-glu-ala-his) box polypeptide 36 [Nannochloropsis gaditana CCMP526] >gi|422295081|gb|EKU22380.1| deah (asp-glu-ala-his) box polypeptide 36 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 2711.41 bits (7027), Expect = 0.000e+0 Identity = 1325/1339 (98.95%), Postives = 1330/1339 (99.33%), Query Frame = 0
Query: 1 MGRREKAEMEARLKDIREQMSELNIVVGQRRREMKTLKEGWQSNGSGRDTDRGETGGGRGALKGKKEQEESTDLDECLTGMFGDEEDEEEMEDKGVDRSSLSGPGSSTQALAKHKEITERSVLGGLFGDDDDSDDTDGSEGAQKGRFSPSTRSSLPPRETAEDSLPALCSLAPPSPDRAIPGVAVEASSKTAPPSTPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKGCVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEEIKAAWKPGSGDDPMNKG 1339
MGRREKAEMEARLKDIREQMSELNIVVGQRRREMK LKEGWQSNGSGRDTDRGETGGGR ALKGKKEQEESTDLDECLTGMFGDEEDEEEMEDKGVDRSSLSGPGSSTQALAKHKEITERSVLGGLFGDDDDSDDTDGSEGAQKGRFS STRSS PPRETAEDSLPALCSLAPPSPDRA+PGVAVEASSKT PP+TPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKATFQKT GKGCVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSA EERTGDVRQG DHCHVRDSPGVLALPSMSDMSWEEQVCLDEG+VEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLG+GHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGG GALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCS+HFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEEIKAAWKPGSGDDPMNKG
Sbjct: 1118 MGRREKAEMEARLKDIREQMSELNIVVGQRRREMKPLKEGWQSNGSGRDTDRGETGGGRCALKGKKEQEESTDLDECLTGMFGDEEDEEEMEDKGVDRSSLSGPGSSTQALAKHKEITERSVLGGLFGDDDDSDDTDGSEGAQKGRFSRSTRSSPPPRETAEDSLPALCSLAPPSPDRAVPGVAVEASSKTVPPTTPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKATFQKTPGKGCVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAEEERTGDVRQGDDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGMVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGKGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGPGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSNHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEEIKAAWKPGSGDDPMNKG 2456
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|971513847|dbj|GAQ84373.1| (helicase domain-containing protein [Klebsormidium nitens]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 426/1083 (39.34%), Postives = 597/1083 (55.12%), Query Frame = 0
Query: 277 DAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRR-------PTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRA-QYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTG-GAILVFLPGLGEIRGILERLRGGRFF-RDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKE---AEARAMHAKLEVR----------QSDFLTLVNTFQAYRSACLQGGA-----AEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADP---------SKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEE 1322
DA++AAAT ALY L L R+LPPP+ D W WQ + R + A +Q + D I+ LV E AA + T GG + G DM W + E GE T +++ G +RL++ EA+ YQ++ + R LP+A R+ IL ++ + VVV+SGETG GK+TQV QYIL+ + G G ++VCTQPRR+AAVS+AERVA E E G +GALVGY +R+++ ++ TRL FCTTGILLR+L D L+ +H+++DEVHER GDFL+ +LR+LL RR P L++VLMSAT++A LFS YFG CPV + GR F VQ LED E + + S A +EG ++ A+ G ++ ++ D + G +E +S AT K++ R+DE ++Y+LLEDL+ +I ESG G GA+LVFLPG+ EI+ +L+RL R F + WLLPLHS++SP+EQR+ F+ P G+RKV+++TNIAETS+T+ DVV V+D G +E Q+ + G +LV W +A+A+QR GRAGRV PG CF L++R + M F PE+ R PL ELCLQ++ L + E L KA EPP+ +++AAV LREVGAL E+ LTPLG HLA LP+D R+GK++++ ++F CL P LTVAA LS KSPF+ P ++ +AR A VR QSD L +V ++ +R A GGA EH C HFL++ L +A +++QF LL D+ V G G L D ++ P NA A + ++ AV+ AGLYPHVA D S K P G + V +HPSSVN+ VT F P+LVFHEK TTR ++ +VVSPYALLLFGGP++V H R+V+D W++ PA+TAVLF+E+RK+LD L V + + A+ + + +++++A LL E+
Sbjct: 497 DAQNAAATLALYELVRDQPLYRILPPPYSDMWKGWQLQGSEARTEATQAAEQQRADFINALVS---EKAATAP----TRRAENGGQRPEEESTSG------DEDMDWSQ----------LETGE-------TSEVQQRNG---------DRLKRELEARGRTPGYQKMLKGRLGLPIARVRDEILGALRQHDVVVVSGETGSGKTTQVPQYILDAEIEAGRGGACSIVCTQPRRIAAVSVAERVASERCE-AAPGENGALVGYHVRLDAARSSETRLLFCTTGILLRRLAGDRALADVSHVVVDEVHERTLQGDFLMTILRELLARRNGGRSRLPPLKVVLMSATLDAGLFSSYFGGCPVVSAEGRTFPVQMHCLEDIYERLAYKLAADSPAAQREGAGMRFAHASRSKMVGGNQDKNKLIKAGWGDELKAGGGDQVLNPNYDEELYQDFSSATRKNLARLDEEQIDYDLLEDLITHI----------DESGDDFGEGAVLVFLPGIAEIQSLLDRLSASRRFGTPEKSQWLLPLHSSVSPSEQRRAFQTPPPGIRKVVVATNIAETSITIPDVVVVIDSGRQKE-QRYDAKRGMASLVEAWVSKANARQRAGRAGRVRPGTCFTLYTRRRLESQMRPFQAPEMARVPLAELCLQVKLLKLG-TAGEVLAKAIEPPKAESVEAAVGSLREVGALDEKEE-------------------------LTPLGHHLAALPVDARIGKIMIYGAIFGCLSPALTVAACLS-YKSPFVTPSDQKDAAEQARTSLAAPAVRGERPGIASGQQSDHLAMVAAYEGWRRAVGTGGAPGKRAGREH--CRKHFLNQQTLEMLADMRAQFATLLADIGFVADATDSGAGRGRRRDAAQLADDVSRP--------WNAHATHPAVIKAVLCAGLYPHVAAIDKDSLAAGHGLTGSGKRPRWTDGHVE-----VAIHPSSVNHMVTEFKRPFLVFHEKVRTTRVFLRDCTVVSPYALLLFGGPVMVLHQEGRIVVDGWLDMNAPAQTAVLFKELRKKLDAFLVGKVDRKRSSTASFDKE----LMESLARLLIDED 1482
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|224010695|ref|XP_002294305.1| (hypothetical protein THAPSDRAFT_12570, partial [Thalassiosira pseudonana CCMP1335] >gi|220970322|gb|EED88660.1| hypothetical protein THAPSDRAFT_12570, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0 Identity = 375/865 (43.35%), Postives = 524/865 (60.58%), Query Frame = 0
Query: 436 RGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKR-RPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALE-WQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIV---EVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSP--WLVFHEKFHTT-RAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLV 1292
R YQ + R LP+++ R+++L ++ V ++ ETG GK+TQ QYILEEALL G G V ++CTQPRRVAA S+AERV++EM + G +VGYQIRME+K ++ T+L FCTTGI+LR+LQ D DLS TH+++DEVHERQ D LLV+LR LL+ RP L+++LMSAT+++DLF +F P+ ++PGR F V YLED ++AT H IEEGS YAL++ ++ ++ V+ RGG + ++ + + D + S Y +T +SM RV+E V+N +L+ED+L ++ E VA + TG +ILVFLPGLGEI+ + ERL G R FRD +++ ++P+HSTLS +QR+ F + G RK+ILSTNI ETSVTV VV V+D G VRE++Q K R L T WC +ASAKQR GRAGRV G+C +L+S HT + +M ++PELQR PLEE+CL I A+ A SC FL +APEPP +I AA+ VL +VGA+ +E+ + Q LTPLG HLAKLP+D RLGKML+F++LFQC+DPVLT+ A LS +SPF A A+A SDF+T N ++AY A L+ + +FC ++LS+ ALRE++ + QF GLL Q G L D + G + K N A+ LV +V+ AGL P+VAH + ++H + +Y H +SVN F+S W+VFHEKF T+ R I+ T V P+ALLLFGG +VV H V++DEW+ A+T V+ RE+RK++D +L+ ++
Sbjct: 3 RKTTSYQRMKAARDSLPMSSYRQTVLDTVRDNPVTILCAETGAGKTTQAPQYILEEALLDGHGDKVQILCTQPRRVAATSVAERVSEEMCD-----TLGQVVGYQIRMEAKRSSHTKLLFCTTGIVLRRLQEDSDLSGITHVLVDEVHERQQQTDVLLVILRQLLETTRPDLKVILMSATMDSDLFCSFFHGAPLISVPGRTFPVNNYYLEDLLDATDHVIEEGSRYALRDNNYG-EKESLYVTTRGGEKRKEVVDLYSQTDPLEVSSTYSE------------YKMSTRRSMERVNEEVINCDLIEDVLLLLLIRPENNNTLVAPDGADLSTG-SILVFLPGLGEIKAMAERLEGNRHFRDASRFEIIPMHSTLSSRDQRRAFIPAKTGCRKIILSTNICETSVTVPSVVCVLDTGKVREVRQNK-RTLTSVLATDWCSKASAKQRAGRAGRVQSGLCLKLYSSHTAK-VMKAASLPELQRVPLEEICLSILASGFAKSCLSFLSQAPEPPSEQSIRAAIDVLHDVGAIERSEEKGTTQHDQ-----------------LTPLGQHLAKLPVDCRLGKMLIFSTLFQCVDPVLTITACLSS-QSPFSTFVNDAAVAKAKQQSFADPDSDFMTYCNLWEAYSKA-LEESHSAVRQFCRDNYLSQAALREISDARRQFLGLL--------------QSIG-----FLGDLVKGEKL--KTSVFNKHARKQELVNSVICAGLIPNVAH-LEQRQMAEYIMWHN-----TERLYFHKASVNASKKRFSSSENWVVFHEKFGTSNRTTISTTCFVHPFALLLFGGHVVVKHTERLVIVDEWMRINMSAQTGVMLREIRKQVDVLLQKMI 800
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|530277974|gb|AGT16032.1| (hypothetical protein [Saccharum hybrid cultivar R570]) HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0 Identity = 416/1158 (35.92%), Postives = 617/1158 (53.28%), Query Frame = 0
Query: 222 KGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKG-----CVLTLRDISGKFES--------------VQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPT-----LRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGS----VYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKL------------EVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPP-CLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAV--ADP-------------SKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKP-LAGLANVESQKEGAVVDAIASLLRGEE 1322
KG +GK P+ L+++ ++ + K S K V LR +G+ +S +E+G+ +A+ A ALY+ L L ++L P+ WQ +G+ SR++D T D R+ G + + S + S + + +D G AEGG+ R T + G + A L+K E KR Y ++ R LP+A ++ L +++ VVV+ GETGCGK+TQV Q+IL++ + G + N+VCTQPRR+AA+S+AERV+ E E G + +LVGYQ+R++S T+L FCTTGILLRKL + DLS TH+++DEVHER L DFLL+VL++L+++R L+++LMSATV++ LF+ YFG CPV ++ GR V +LED E + + S Y + G +++ A+ V+ R G W ++ ++EG +++ + Y++ T +++ R++E V++++LLEDL+ YI E P GAILVFLPG+ EI +++RL F + W+LPLHS L P++QRKVF+ P RKVI++T+IAETS+T+DDV+YVVD G +E + R ++V W RA+AKQR GRAGRV PG+CF L++RH F +M F VPE+ R PL ELCLQI++ L + FLLKA EPP AI +AV +L +VGA EG E L+PLG HLAKLP+DV +GKM+++ ++F CL P+L+VAA LS KSPFL+P ++ A L + +QSD L LV + + LQ GA +FC S +L+ + + ++ QF LL D+ L+ P L P+ G + LE + + N A+ +++ +++ AGLYP+VA ++ DP SK P Y G V++HPSSVN+ + P+LVF EK TT+ ++ TSVVSPY+LLLFGG +V+ H VVID W+ + A+TAVLF+++R LD VL+ L KP +A + E VV +I LL E+
Sbjct: 366 KGDSGKMPKAVLQKFCQKLGWEAPKYNKISEKDGKFVYSVNVLRGATGRGKSRKAGGLTKIQLPELDEEYGSVQEAQSRVAAFALYQFFADLPLRQLLTEPYSSLILRWQ---------------EGELSSTSRVLD--------------TEDSRRSGFVDMLLNIDADTIPSSEIENSSTDGISMDSG--NAEGGKSVNEKRQT-TMMSCMGLKSAEHAESAILKKQLEDKRKLPNYLKMLEARASLPIARQKQHFLQLLKENDVVVVCGETGCGKTTQVPQFILDDMIESELGGSCNIVCTQPRRIAAISVAERVSDERCE-SSPGSNDSLVGYQVRLDSARNERTKLLFCTTGILLRKLSGNRDLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKVILMSATVDSSLFARYFGECPVISVEGRTHPVSTHFLEDVYEKMEYCLALDSPASGAYFAQHGE-KWKHASSSVNNRRGKKNLVLSSWGDESTLSEGYINPHYISDYYK----SYNERTNQNLKRLNEDVIDFDLLEDLICYIDENCPL------------GAILVFLPGVAEIDLLIDRLSASVRFGGASSDWILPLHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVIYVVDTGKHKE-NRYNPRKKMSSIVEDWISRANAKQRWGRAGRVKPGLCFCLYTRHRFENIMQPFQVPEMLRMPLTELCLQIKSLHLG-DIKSFLLKAVEPPNEEAISSAVDLLYKVGAF------------------------EGHEE-LSPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSVAAFLS-YKSPFLSPKDEKQNVEKAKATLLNENLDGSTSVTDNKQSDHLLLVIAYDKWSRILLQNGAKSARQFCHSFYLNNTVMHMIRDMRLQFGTLLADIGLIDLPKDSLRPKEGSRKN--NLESWFSNMSL-----PFNTYARCTSVIKSIMCAGLYPNVAASLEGVDPGALGGRKPSDVLFSKDRPRWYDG-----RREVHIHPSSVNHSLKAVQYPFLVFLEKVETTKVFLRDTSVVSPYSLLLFGGSMVIQHQTGVVVIDGWLRLSAAAQTAVLFKQLRITLDAVLKELTRKPEMATFVDNE------VVRSIIHLLLEED 1427
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|1026772308|gb|OAE31756.1| (hypothetical protein AXG93_4874s1190 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 642.884 bits (1657), Expect = 0.000e+0 Identity = 418/1149 (36.38%), Postives = 605/1149 (52.65%), Query Frame = 0
Query: 225 TGKTPRRQLEEYLKRKRLGKATFQKTSGKG--CVLTLRDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRR-----PTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYAL----KEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIV-EVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFG-KEAEARAMHAKLEVR-------------QSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMA--------------SLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVA----------HAVADPSKKNPSLYHGP-MSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEE 1322
T + P+ L+++ ++ ++K KG C T+ DA++A AT AL L P L L R+LP P+R WQ + R E+ +G+ R + VDS+ + + R+ DS + L E E + AP + T R+ + + L+K E K Y+ + R LP+A + L +++ VVV+SGETGCGK+TQV QYIL+E + G+G N+VCTQPRR+AA+S+AERVA E E G SG+LVGYQ+R+++ A T+L FCTTGILLR+L D +L +HI++DEVHER LGDFLLV+L+DLL+RR L+L+LMSAT+++DLFS YFG+CPV GR F V YLED + + + S A+ K + + R V+ S RG Q+ W +D + E + + + YS+ ++ ++E V++Y+LLEDL+ +I E EP GAILVFLPG+ EI+ + +RL R F WLLPLHS+++ ++QR+VF+ P HG+RKV+L+TNIAETS+T+DDVV+V+D G +E + R G ++V W +A++KQR GRAGRV G C+ LF+R+ F LM F +PE+ R PL ELCLQI+ L FL +A EPP+ A+ +AV LR+VGAL E+ LT LG HLA LP+D R+GKM++F ++ CL PVLTVAA LS KSPF++P +EA RA A + + QSD L +V + + + G+ FCSS+FLS L + +++QF LL D+ ++ P + G E+ + P L N + + ++V A + AGLYP+VA HA A + S P + V++HP+S+N+ V F P++VFHEK T+R Y+ T+V+SPYALLLFGG + V H RV +D W+E PA+TAVLF+ +R LD +L+ + P +++ S+ V+ +IA LL EE
Sbjct: 589 TLRQPKAVLQQHCQKNAWAAPKYEKLPAKGRLCAYTV-----------TVTRPTDAQNAVATWALSILLPDLPLHRILPEPYRSMCLRWQTSGQDARNMEL----KGEEARRATFVDSLVQSSI----------TREVTSKSSAADS--------------------QDDLTEVEE-DNEAPAKPTTEGRKDSKSVSQKRSESLHLKKMMEDKLKSKNYKVMLDSRAALPMAMKKHQFLEKLKEHDVVVVSGETGCGKTTQVPQYILDEMIGAGQGGFCNIVCTQPRRIAAISVAERVAVERCEPP-PGSSGSLVGYQVRLDTAWNAGTKLLFCTTGILLRRLAGDRELEGVSHIVVDEVHERTVLGDFLLVILKDLLERRRKAGGSPLKLILMSATLDSDLFSQYFGDCPVIKAKGRTFPVTTHYLEDVHDELEYSLSTDSPAAMHNDYKANKKKTTRNLVD-SSRGRQNLVQS-GWGDDSTLEE----TAVNPLYDRDLYSNYSEKCRANLASLNEDVIDYDLLEDLIIHINDEGEP-------------GAILVFLPGMAEIQFLWDRLAVSRRFSGSASEWLLPLHSSVASSDQRRVFQTPPHGLRKVVLATNIAETSITIDDVVHVIDSGKHKE-NRFDPRRGMSSMVEAWISQANSKQRSGRAGRVRSGHCYCLFTRNRFEKLMRPFQLPEILRVPLVELCLQIKLLRLG-RIASFLEQALEPPKAEAVLSAVDTLRQVGALDENEN-------------------------LTSLGYHLANLPVDCRVGKMMLFGAVLGCLGPVLTVAACLSH-KSPFISPQDQREAAERAKQALVSDKGKDGGVGNIASGQQSDHLAMVAAYNGWSTLATLKGSRAARDFCSSNFLSGSTLNMLRLVGANQNPDRIFGRDMRNQFASLLADIGFIKVPQGERGKRGN------FENLINDPNQL-----FNRNSTHASVVKAALCAGLYPNVAAMEEESVRAGHASALSRRAGLSSGARPRWNDGRREVFIHPTSINHSVAEFRQPFIVFHEKVETSRVYLRDTTVISPYALLLFGGAINVQHQTGRVTVDSWLEMNSPAQTAVLFKNLRAALDSLLDEHIKTPQGSISSRTSE----VITSIAQLLIDEE 1628
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|780059870|ref|XP_793172.4| (PREDICTED: ATP-dependent RNA helicase DHX29 [Strongylocentrotus purpuratus]) HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0 Identity = 405/1161 (34.88%), Postives = 620/1161 (53.40%), Query Frame = 0
Query: 184 AVEASSKTAPPSTPQPQSVAPDSSPAPALAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKAT---FQKTSGKG----CVLTL-----RDISGKFESVQEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEG--GERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALK-EGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPP----CLGPQGGGTVSYRALEDFMAGPEALR-KGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADPSKKNPSLYHGPMSAPSS--PVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIASLLRGEE 1322
A+EA +K+AP T S + PA V + K WTGKTP++ L ++ RK K++ +QK G C +T+ + + E + E +A H A+ A + L + ++LPPP+RD W EW + + +E+ + + + +++ ++ + + D + G SWE+ +E E + P +G +G L+ E ++ L R+ LPV R+ +L I K+S+V+++GETG GKSTQ+ Q++LE+ +L G G + ++VCTQPRR++A SLA+RV+QE+GE G G +L GYQIR+ESK T+ TRL +CTTG+LLRKLQ DP L +HII+DEVHER DFL++++R L+++R L+L+LMSAT+++ S YF +CPV IPGR F VQ +LED +E T + +E S YAL+ E AQ +ATV V+ +GG++ L W+ +D G YSK T + + R++ +N +L+ +LL Y+ +V K + GA+L+F+PGL +I+ + E L+ F ++Y LL LHS LS +Q F P GVRK++++TNIAET +T+ DVV+V+D G V+E + R +L + +ASAKQR GRAGRV G CFRL+++ + L S F PE+QR LEELCL I L + +FL +A +PP A+ A++ +LREVGA CL + LTPLG HLA LP++VR+GKML+FA++F CL+PV +A+ ++ K PFL P GK ++A A + V SD +T+ F ++ A +G +AE +FC +FL++ AL M ++K L+ + + P Q + LE ++ E+L A N L+ +V+ AG+YP+VA DP A ++ PV +HPSSVN + T W++F E+ +R YI +S+++PY LLLFGG + V H + +D+WI+F A+TAV+F+E+R L+ LE +A P + + E V+ A+ LL+ E+
Sbjct: 323 AMEAEAKSAPSPTSD-TSTKKKTEPAAPPDVRDFSYTKKVWTGKTPKQFLIDWC-RKHFPKSSPPKYQKIQAHGNLWRCKVTVDRPKQEPLVFRTEILTE--NTMEAHHLASVHAFWHLAKGQSIQQLLPPPYRDVWLEWMDAETKEKEETTERKNKPRDQFVGQMLKQIKASQS-----------KNNTDQPEKKREEGGGEEDGEEAESWEDAWDDEEKEEEEANKVDVKTQPNQG-----------KGPLVTNRTLKTILEKNSNTTQHGRLLEKRQTLPVFQHRDQVLERIYKDSIVIVAGETGSGKSTQIPQFLLEDLVLSGRGGSGSIVCTQPRRISATSLAKRVSQELGEPG-PGHRDSLCGYQIRLESKQTSTTRLLYCTTGVLLRKLQLDPSLKDISHIIIDEVHERSVQSDFLMIIVRKLVQQRSDLKLILMSATLDSQKLSAYFYHCPVINIPGRTFPVQVYHLEDVVEETEYQLESDSRYALRYESLAQEDKATVSVTSKGGDSKQVQLSWETNDVANLDESG---------LDVEKYSKRTRQVITRLNPDTINMDLIVELLSYLEQVPTFKCVE--------GAVLIFMPGLAQIQQLYEMLQADPNFSKTDRYTLLALHSVLSSDDQSAAFGIPPPGVRKIVIATNIAETGITIPDVVFVIDAGKVKE-NRYNERSQMSSLEEMYVSKASAKQRQGRAGRVREGFCFRLYTKQRYDVLRS-FTQPEIQRVALEELCLHIMKCSLG-NPEDFLQEALDPPLPQAVRASMSLLREVGA-----------------------CL-ADTPTLTPLGQHLAALPVNVRIGKMLLFAAIFGCLEPVAVIASAMTD-KPPFLVPLGKRSQADAAKRSMAVANSDHITIYKAFSGWKEARSKGRSAES-RFCHGNFLNRTALLNMENVKRDLMQLVRSIGFIPSPTNNKAASAKQPSLSTKMEVLE--ISKTESLYGYKDAFPLTASNTALLKSVLTAGMYPNVAKTTYDPPAHGMKDDEIVCRADTTKGPVTVHPSSVNRNLG--TDGWMLFSERVKLSRVYIRESSLITPYPLLLFGGEIAVHHRERLISVDDWIQFQASAKTAVIFKELRLLLNMFLEKKLANPALQIQDEE------VIKALLKLLKSEK 1400
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|1205964730|ref|XP_021318714.1| (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X2 [Sorghum bicolor] >gi|992164377|gb|KXG26331.1| hypothetical protein SORBI_3006G083300 [Sorghum bicolor]) HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0 Identity = 412/1158 (35.58%), Postives = 615/1158 (53.11%), Query Frame = 0
Query: 222 KGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKG-----CVLTLRDISGKFESV--------------QEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPT-----LRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGS----VYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKL------------EVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPP-CLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAV--ADP-------------SKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKP-LAGLANVESQKEGAVVDAIASLLRGEE 1322
KG +GK P+ L+++ ++ + K S + V LR +G+ +S +E+G+ +A+ A ALY+ L L ++L P+ WQ +G+ SR++D T D R+ G + + S + S + + +D G E ++ +R+ + D A L+K E KR Y ++ R LP+A ++ L +++ VVV+SGETGCGK+TQV Q+IL++ + G + N+VCTQPRR+AA+S+AERV+ E E G + +LVGYQ+R++S T+L FCTTGILLRKL + DLS TH+++DEVHER L DFLL+VL++L+++R L+++LMSATV++ LF+ YFG CPV ++ GR V +LED E + + S Y + G +++ A+ V+ R G W ++ ++EG +++ + Y++ T +++ ++E V++++LLEDL+ YI E P GAILVFLPG+ EI +++RL F + W+LPLHS L P++QRKVF+ P RKVI++T+IAETS+T+DDV+YVVD G +E + R ++V W RA+AKQR GRAGRV PG+CF L++RH F +M F VPE+ R PL ELCLQI++ L + FLLKA EPP AI +AV +L +VGA EG E L+PLG HLAKLP+DV +GKM+++ ++F CL PVL+VAA LS KSPFL+P ++ A L + +QSD L +V + + LQ GA +FC S +L+ + + ++ QF LL D+ L+ P L P+ G + LE + + N A+ +++ +V+ AGLYP+VA ++ DP SK P Y G V++HPSSVN+ + P+LVF EK TT+ ++ TSVVSPY+LLLFGG +V+ H VVID W+ + A+TAVLF+++R LD VL+ L KP +A + E VV +I LL E+
Sbjct: 366 KGDSGKMPKAVLQKFCQKLGWEAPKYNKISERDGKFVYSVNVLRGATGRGKSWKAGGLTKIQLPELDEEYGSVQEAQSRVAAFALYQFFADLPLRQLLTEPYSSLILRWQ---------------EGELSSTSRVLD--------------TEDSRRSGFVDMLLNIDADTIPSSEIENSSADGISMDSGNTEG--------SKSLNEKRQTSMKSSMDHAESAILKKQLEDKRKLPNYLKMLEARASLPIARQKQHFLQLLKENDVVVVSGETGCGKTTQVPQFILDDMIESELGGSCNIVCTQPRRIAAISVAERVSDERCE-SSPGSNDSLVGYQVRLDSARNERTKLLFCTTGILLRKLSGNRDLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKVILMSATVDSSLFARYFGECPVISVEGRTHPVSTHFLEDVYEKMEYCLALDSPASGAYFAQHGE-KWKHASSSVNNRRGKKNLVLSSWGDESMLSEGYINPHYISDYYK----SYNERTNQNLKHLNEDVIDFDLLEDLICYIDENCPP------------GAILVFLPGVAEIDLLIDRLSASVRFGGASSDWILPLHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVIYVVDTGKHKE-NRYNPRKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENIMRPFQVPEMLRMPLTELCLQIKSLHLG-DIKSFLLKAVEPPNEEAISSAVDLLYKVGAF------------------------EGHEE-LSPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPVLSVAAFLS-YKSPFLSPKDEKQNVEKAKATLLNENLDGSTSVTDNKQSDHLLMVIAYDKWSRILLQNGAKSARQFCHSFYLNNTVMHMIRDMRLQFGTLLADIGLIDLPKDSLRPKEGSRKN--NLESWFSNMSL-----PFNTYARCTSVIKSVMCAGLYPNVAASLEGVDPGALGGRKPSDVLFSKDRPRWYDG-----RREVHIHPSSVNHSLKAVQYPFLVFLEKVETTKVFLRDTSVVSPYSLLLFGGSMVIQHQTGVVVIDGWLRLSAAAQTAVLFKQLRITLDAVLKELTRKPEMATFVDNE------VVRSIIHLLLEED 1422
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|919054360|ref|XP_013409135.1| (PREDICTED: ATP-dependent RNA helicase DHX29-like [Lingula anatina]) HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0 Identity = 399/1143 (34.91%), Postives = 613/1143 (53.63%), Query Frame = 0
Query: 200 QSVAPDSSPAPA-------LAVSLAAGIPKGWTGKTPRRQLEEYLKRKRLGKA---TFQKTSGKGCVLTLR-DISGKFESVQEFGA------YADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGA-----ALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPTLRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGSVYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLA-PSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKLEVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPPCLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAVADP---SKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKPLAGLANVESQKEGAVVDAIAS 1316
Q+ D P+P L + K WTGK+P++ L ++ RK L K+ +F + + + R I + E + +AEH AAT ALY L ++ ++LPPP+RD W EWQ+ + ++ + + ++RL+ ++ A +L+ EE+T D +G SWE+ + E E PT+ Q++K L E +++ F + ++ YQ+L R +LPV R +I+ I + VVVI+GETG GKSTQ+ Q+ILEE L + N++ T+PRR++ +SLA RV++E+GE G G +L GYQIR ES+ TRL +CTTG+LLRK+Q D L THI++DEVHER DFLLV+L+ LL RP L+++LMSATV++ FS YF +CPV IPGR F V+ YLED IE +G+ +EE S YALK + + A + V+ GGNT + W +DD G + YS T K++ ++ +N EL+ DL+ + VE + G GA+L+FLPGL +I+ + L + F D+++YW++PLHS L+ +Q K F P G+RKV+++TNIAET +T+ DVV+V+D G V+E + + + +L + +ASAKQR GRAGRV PGVCFRLF+RH + + M ++ PE+ R PLEELCL I + P+ FL +A +PP+ ++ A+ +LREVGA G+ LTPLG HLA LP+ VR+GKML++ ++ CL+P+ +AA L+ K PF+APF + +A L V SD LT+ + ++ A +G AE +C H+L + +L EM ++K L+ + K S ++ + + + + I+LV AV+ AGLYP+VA +P + NPS + P ++ HPSSVN + + WLV+HEK ++ Y+ +++++PY +LLFGG + V H + +++WI+F A+TAV+F+E+R +D +L+ + P GL ++ ++D I S
Sbjct: 310 QAAEKDEKPSPTKVPSRKDLDIRTFEYTRKQWTGKSPKQFLIDWC-RKNLPKSKPPSFHRIDVRSNLFRCRAKIQRSKDDFLEVCSDIVCENVKEAEHVAATLALYHLCKGQRVYQLLPPPYRDVWMEWQDAETKQHQERKEEANKPRDQLVTRLLKKLKLDADSSTPSLTKEEEQTVDASEG---------------------SWEDLAD------DWEMTEPDLPTQTKPHQQKKK-------YLSEHMKREFLERTKKSNYQKLLESRTQLPVFQERGAIVDVICRNQVVVIAGETGSGKSTQIPQFILEEYLRRDSIESCNVIVTEPRRISTISLANRVSEELGE-GAPGSKTSLCGYQIRFESRICDTTRLVYCTTGVLLRKMQQDATLQDVTHIVVDEVHERSMQSDFLLVILKKLLVLRPDLKVILMSATVDSHKFSSYFQHCPVLHIPGRTFPVEVLYLEDVIEKSGYVLEEDSKYALKNQENE-EHAVLSVTEHGGNTSKMDVYWTKDDPSAGDVSG---------LDPSVYSLKTRKAVSLMNPERINMELIVDLIHF---VESSADFCG-----LDGAVLIFLPGLLDIQECYDSLMTDKTFSDESRYWIVPLHSVLTSKDQSKAFSIPPKGIRKVVIATNIAETGITIPDVVFVIDSGKVKENRYIESKQMS-SLEEVYISQASAKQRQGRAGRVRPGVCFRLFTRHKYDS-MKSYSTPEILRVPLEELCLHILKTEQGDPTT--FLSQALDPPKAQSVTKAMCLLREVGACT------------------------GQPAALTPLGHHLATLPVSVRIGKMLLYGAMLGCLEPISVIAAALTS-KPPFVAPFNQREQANLAKQALAVAASDHLTICKAYYGWKDAQTRGRQAES-SYCQKHYLKRQSLIEMENVKEDLTKLIQKIGF-DKERVTQVTSQVNTSKAKKDEVLEISKTPSSDASYSFNMKQISLVKAVLAAGLYPNVAQISYEPPVDAVANPSRTVCTGTTPQGTLHAHPSSVNRFLE--ANGWLVYHEKVKLSKVYMRDSTLITPYPILLFGGDITVQHTQQLITVEDWIQFKSFAKTAVIFKELRTLIDTLLKDKLENP--GLDFKDNPAISILIDLITS 1363
BLAST of EWM27577.1 vs. NCBI_GenBank
Match: gi|1205964726|ref|XP_021318711.1| (DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [Sorghum bicolor] >gi|1205964728|ref|XP_021318712.1| DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1 [Sorghum bicolor] >gi|992164378|gb|KXG26332.1| hypothetical protein SORBI_3006G083300 [Sorghum bicolor]) HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0 Identity = 414/1158 (35.75%), Postives = 614/1158 (53.02%), Query Frame = 0
Query: 222 KGWTGKTPRRQLEEYLKRKRLGKATFQKTSGKG-----CVLTLRDISGKFESV--------------QEFGAYADAEHAAATRALYRLEPKLQLSRVLPPPFRDWWAEWQNEARRLREQEVAAVKQGKRDRISRLVDSMREGAALSAGEERTGDVRQGGDHCHVRDSPGVLALPSMSDMSWEEQVCLDEGLVEAEGGERGAPTRGTGSQREKTGGPRGDTALGERLRKAFEAKRGQARYQELARVRRELPVAATRESILHSIEKESVVVISGETGCGKSTQVAQYILEEALLLGEGHNVNLVCTQPRRVAAVSLAERVAQEMGEEGGAGGSGALVGYQIRMESKTTAATRLTFCTTGILLRKLQTDPDLSQYTHIILDEVHERQALGDFLLVVLRDLLKRRPT-----LRLVLMSATVNADLFSWYFGNCPVFTIPGRCFSVQEQYLEDTIEATGHFIEEGS----VYALKEGRAQYQRATVEVSGRGGNTYSQALEWQEDDAVTEGRRGSRWVAFMEECREAGYSKATLKSMGRVDESVVNYELLEDLLRYIVEVEPAKVAKGESGWRTGGAILVFLPGLGEIRGILERLRGGRFFRDDNQYWLLPLHSTLSPAEQRKVFERPRHGVRKVILSTNIAETSVTVDDVVYVVDCGLVREIQQTKGRGGGRALVTTWCCRASAKQRMGRAGRVGPGVCFRLFSRHTFRTLMSEFAVPELQRTPLEELCLQIRANDLAPSCREFLLKAPEPPELVAIDAAVRVLREVGALASAEDGAEGRGQQKRKGGDNGRCLEGEEGILTPLGIHLAKLPMDVRLGKMLVFASLFQCLDPVLTVAAGLSGIKSPFLAPFGKEAEARAMHAKL------------EVRQSDFLTLVNTFQAYRSACLQGGAAEEHKFCSSHFLSKIALREMASLKSQFFGLLVDMQLVRKPP-CLGPQGGGTVSYRALEDFMAGPEALRKGGGVNAEAQNINLVLAVVGAGLYPHVAHAV--ADP-------------SKKNPSLYHGPMSAPSSPVYLHPSSVNYGVTYFTSPWLVFHEKFHTTRAYIAPTSVVSPYALLLFGGPLVVDHLNNRVVIDEWIEFTCPARTAVLFREMRKRLDEVLEVLVAKP-LAGLANVESQKEGAVVDAIASLLRGEE 1322
KG +GK P+ L+++ ++ + K S + V LR +G+ +S +E+G+ +A+ A ALY+ L L ++L P+ WQ +G+ SR++D T D R+ G + + S + S + + +D G EG + R T + D A L+K E KR Y ++ R LP+A ++ L +++ VVV+SGETGCGK+TQV Q+IL++ + G + N+VCTQPRR+AA+S+AERV+ E E G + +LVGYQ+R++S T+L FCTTGILLRKL + DLS TH+++DEVHER L DFLL+VL++L+++R L+++LMSATV++ LF+ YFG CPV ++ GR V +LED E + + S Y + G +++ A+ V+ R G W ++ ++EG +++ + Y++ T +++ ++E V++++LLEDL+ YI E P GAILVFLPG+ EI +++RL F + W+LPLHS L P++QRKVF+ P RKVI++T+IAETS+T+DDV+YVVD G +E + R ++V W RA+AKQR GRAGRV PG+CF L++RH F +M F VPE+ R PL ELCLQI++ L + FLLKA EPP AI +AV +L +VGA EG E L+PLG HLAKLP+DV +GKM+++ ++F CL PVL+VAA LS KSPFL+P ++ A L + +QSD L +V + + LQ GA +FC S +L+ + + ++ QF LL D+ L+ P L P+ G + LE + + N A+ +++ +V+ AGLYP+VA ++ DP SK P Y G V++HPSSVN+ + P+LVF EK TT+ ++ TSVVSPY+LLLFGG +V+ H VVID W+ + A+TAVLF+++R LD VL+ L KP +A + E VV +I LL E+
Sbjct: 366 KGDSGKMPKAVLQKFCQKLGWEAPKYNKISERDGKFVYSVNVLRGATGRGKSWKAGGLTKIQLPELDEEYGSVQEAQSRVAAFALYQFFADLPLRQLLTEPYSSLILRWQ---------------EGELSSTSRVLD--------------TEDSRRSGFVDMLLNIDADTIPSSEIENSSADGISMDSG--NTEGSKSLNEKRQTSMK-----SSMADHAESAILKKQLEDKRKLPNYLKMLEARASLPIARQKQHFLQLLKENDVVVVSGETGCGKTTQVPQFILDDMIESELGGSCNIVCTQPRRIAAISVAERVSDERCE-SSPGSNDSLVGYQVRLDSARNERTKLLFCTTGILLRKLSGNRDLSDVTHVVVDEVHERTILSDFLLIVLKNLVEKRSNQQGRKLKVILMSATVDSSLFARYFGECPVISVEGRTHPVSTHFLEDVYEKMEYCLALDSPASGAYFAQHGE-KWKHASSSVNNRRGKKNLVLSSWGDESMLSEGYINPHYISDYYK----SYNERTNQNLKHLNEDVIDFDLLEDLICYIDENCPP------------GAILVFLPGVAEIDLLIDRLSASVRFGGASSDWILPLHSLLGPSDQRKVFQSPPDNFRKVIIATDIAETSITIDDVIYVVDTGKHKE-NRYNPRKKMSSIVEDWISRANAKQRRGRAGRVKPGLCFCLYTRHRFENIMRPFQVPEMLRMPLTELCLQIKSLHLG-DIKSFLLKAVEPPNEEAISSAVDLLYKVGAF------------------------EGHEE-LSPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPVLSVAAFLS-YKSPFLSPKDEKQNVEKAKATLLNENLDGSTSVTDNKQSDHLLMVIAYDKWSRILLQNGAKSARQFCHSFYLNNTVMHMIRDMRLQFGTLLADIGLIDLPKDSLRPKEGSRKN--NLESWFSNMSL-----PFNTYARCTSVIKSVMCAGLYPNVAASLEGVDPGALGGRKPSDVLFSKDRPRWYDG-----RREVHIHPSSVNHSLKAVQYPFLVFLEKVETTKVFLRDTSVVSPYSLLLFGGSMVIQHQTGVVVIDGWLRLSAAAQTAVLFKQLRITLDAVLKELTRKPEMATFVDNE------VVRSIIHLLLEED 1423 The following BLAST results are available for this feature:
BLAST of EWM27577.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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