EWM27573.1, cds3075 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|585109840|gb|EWM27573.1| (sentrin-specific protease 7 [Nannochloropsis gaditana]) HSP 1 Score: 2579.28 bits (6684), Expect = 0.000e+0 Identity = 1263/1263 (100.00%), Postives = 1263/1263 (100.00%), Query Frame = 0 Query: 1 MPGVPRPPCLPRRPLFGCCIAVSLREKRIRLAWGPRNVPAPALHGELSIPFRNLSAFHAYGPLAELNDCYLLLLAESKPVGKGSGKTARAGGQALPEDRHRLYVLQLDPMSTGTSMHQPEARARHENQASLRALFHRVEEQGSSHSLAAFRFFPHPKDWARPEVTSMIARIHEAQGTNSAAELLTGVREGLQEGSGAEGLGEGRGGGEAVEKKAWLRRSTRRSTRDSAKAGLYEHLGAGGGPLVGEEEARLLFKFPLHPEAPDRVALTSLDRVRLEEGEFLNDNVIDFHFKWLVHCGVGCVEDVGLADEKRKGLRDVHIFSTHFYSKLTETSSITRAIKRSSLYFKSATQKKGSKDKMKEDGSTMGKEQIVATGKTQGTERAGEKDIHTPMSEVRAPRDEDDRDDIELLKKAGPKGRVEKEAATEEGWDPLLAFSFSPDSPSPVTKAPTRQEIQAKERQRREEEKYEAAHSLVQRWTKNVDLFSKKMVLVPINEALHWSLAVLCNLDQVQSLVDPATEPLTADDEGKAPIETPVHKKSKRKRLRKSATMEGENASWLKEEHLDRWGEGEGGDRVVDVGVQESQEPGDPPVVVSLGRKKKKWLSTRPQSAADSGSGLLVEARAAGGRQGEHVVGRESKDQTKHGAMDVGEPWSGDSSQSKEEKEGDRCPQEEGDSLDLTIGDVLAADGLGVGSKESSHEMEEKPETGGKSARWEGRRGSGEEQGLDGGRDGKTDVKDGRKDVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKGEETGKLIKKEEMITGKEEEREMEELGELDIKTGDGKDANGGEDREESYDNGQDHASVEMQWSPERCVEAKGEEGGVDDEEDGDDDETVEDAYAPRRIDANLSTTAEHPASPPRSSPSSLSGTPVISSDTWSNERMLTSKEERSIGNGAGSQNPSPSSISSQRARMAPSASVAAAVDYNEEGSVTLGTVKISPGEAESMSVFQVDGEDVKDEEVEAEEKKLLDFQIFGAKSPDELRKLKNMRKRRKRNEKKRAARIEAAALQSPLQRAKARAEQGTLEGVQGNELWKIHGDDEAFVDLSSSLSARHEGPSHLSIYKILICWEKVQSTCYTDGKRCKIVLSGLEFLKHKSMRVRECPTRGNGISPPSRQKSSNCTEKMCPEATM 1263 MPGVPRPPCLPRRPLFGCCIAVSLREKRIRLAWGPRNVPAPALHGELSIPFRNLSAFHAYGPLAELNDCYLLLLAESKPVGKGSGKTARAGGQALPEDRHRLYVLQLDPMSTGTSMHQPEARARHENQASLRALFHRVEEQGSSHSLAAFRFFPHPKDWARPEVTSMIARIHEAQGTNSAAELLTGVREGLQEGSGAEGLGEGRGGGEAVEKKAWLRRSTRRSTRDSAKAGLYEHLGAGGGPLVGEEEARLLFKFPLHPEAPDRVALTSLDRVRLEEGEFLNDNVIDFHFKWLVHCGVGCVEDVGLADEKRKGLRDVHIFSTHFYSKLTETSSITRAIKRSSLYFKSATQKKGSKDKMKEDGSTMGKEQIVATGKTQGTERAGEKDIHTPMSEVRAPRDEDDRDDIELLKKAGPKGRVEKEAATEEGWDPLLAFSFSPDSPSPVTKAPTRQEIQAKERQRREEEKYEAAHSLVQRWTKNVDLFSKKMVLVPINEALHWSLAVLCNLDQVQSLVDPATEPLTADDEGKAPIETPVHKKSKRKRLRKSATMEGENASWLKEEHLDRWGEGEGGDRVVDVGVQESQEPGDPPVVVSLGRKKKKWLSTRPQSAADSGSGLLVEARAAGGRQGEHVVGRESKDQTKHGAMDVGEPWSGDSSQSKEEKEGDRCPQEEGDSLDLTIGDVLAADGLGVGSKESSHEMEEKPETGGKSARWEGRRGSGEEQGLDGGRDGKTDVKDGRKDVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKGEETGKLIKKEEMITGKEEEREMEELGELDIKTGDGKDANGGEDREESYDNGQDHASVEMQWSPERCVEAKGEEGGVDDEEDGDDDETVEDAYAPRRIDANLSTTAEHPASPPRSSPSSLSGTPVISSDTWSNERMLTSKEERSIGNGAGSQNPSPSSISSQRARMAPSASVAAAVDYNEEGSVTLGTVKISPGEAESMSVFQVDGEDVKDEEVEAEEKKLLDFQIFGAKSPDELRKLKNMRKRRKRNEKKRAARIEAAALQSPLQRAKARAEQGTLEGVQGNELWKIHGDDEAFVDLSSSLSARHEGPSHLSIYKILICWEKVQSTCYTDGKRCKIVLSGLEFLKHKSMRVRECPTRGNGISPPSRQKSSNCTEKMCPEATM Sbjct: 1 MPGVPRPPCLPRRPLFGCCIAVSLREKRIRLAWGPRNVPAPALHGELSIPFRNLSAFHAYGPLAELNDCYLLLLAESKPVGKGSGKTARAGGQALPEDRHRLYVLQLDPMSTGTSMHQPEARARHENQASLRALFHRVEEQGSSHSLAAFRFFPHPKDWARPEVTSMIARIHEAQGTNSAAELLTGVREGLQEGSGAEGLGEGRGGGEAVEKKAWLRRSTRRSTRDSAKAGLYEHLGAGGGPLVGEEEARLLFKFPLHPEAPDRVALTSLDRVRLEEGEFLNDNVIDFHFKWLVHCGVGCVEDVGLADEKRKGLRDVHIFSTHFYSKLTETSSITRAIKRSSLYFKSATQKKGSKDKMKEDGSTMGKEQIVATGKTQGTERAGEKDIHTPMSEVRAPRDEDDRDDIELLKKAGPKGRVEKEAATEEGWDPLLAFSFSPDSPSPVTKAPTRQEIQAKERQRREEEKYEAAHSLVQRWTKNVDLFSKKMVLVPINEALHWSLAVLCNLDQVQSLVDPATEPLTADDEGKAPIETPVHKKSKRKRLRKSATMEGENASWLKEEHLDRWGEGEGGDRVVDVGVQESQEPGDPPVVVSLGRKKKKWLSTRPQSAADSGSGLLVEARAAGGRQGEHVVGRESKDQTKHGAMDVGEPWSGDSSQSKEEKEGDRCPQEEGDSLDLTIGDVLAADGLGVGSKESSHEMEEKPETGGKSARWEGRRGSGEEQGLDGGRDGKTDVKDGRKDVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKGEETGKLIKKEEMITGKEEEREMEELGELDIKTGDGKDANGGEDREESYDNGQDHASVEMQWSPERCVEAKGEEGGVDDEEDGDDDETVEDAYAPRRIDANLSTTAEHPASPPRSSPSSLSGTPVISSDTWSNERMLTSKEERSIGNGAGSQNPSPSSISSQRARMAPSASVAAAVDYNEEGSVTLGTVKISPGEAESMSVFQVDGEDVKDEEVEAEEKKLLDFQIFGAKSPDELRKLKNMRKRRKRNEKKRAARIEAAALQSPLQRAKARAEQGTLEGVQGNELWKIHGDDEAFVDLSSSLSARHEGPSHLSIYKILICWEKVQSTCYTDGKRCKIVLSGLEFLKHKSMRVRECPTRGNGISPPSRQKSSNCTEKMCPEATM 1263
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|553195083|ref|XP_005856080.1| (sentrin-specific protease 7, partial [Nannochloropsis gaditana CCMP526] >gi|422292974|gb|EKU20275.1| sentrin-specific protease 7, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 805.053 bits (2078), Expect = 0.000e+0 Identity = 396/403 (98.26%), Postives = 399/403 (99.01%), Query Frame = 0 Query: 479 NVDLFSKKMVLVPINEALHWSLAVLCNLDQVQSLVDPATEPLTADDEGKAPIETPVHKKSKRKRLRKSATMEGENASWLKEEHLDRWGEGEGGDRVVDVGVQESQEPGDPPVVVSLGRKKKKWLSTRPQSAADSGSGLLVEARAAGGRQGEHVVGRESKDQTKHGAMDVGEPWSGDSSQSKEEKEGDRCPQEEGDSLDLTIGDVLAADGLGVGSKESSHEMEEKPETGGKSARWEGRRGSGEEQGLDGGRDGKTDVKDGRKDVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKG 881 NVDLFSKKMVLVPINEALHWSLAVLCNLD+VQSLVDPATEPLTADDEGKAPIETPVHKKSKRKRLRKSATMEGENASWLKE+HLDRWGEGEGGDRVVDVGVQESQEPGDPPVVVSLGRKKKKWLSTRPQSAADSGSGLLVEARAAGGRQGEHVVGRESKDQTKHGAMDVGEPWSGDSSQSKEEKEGDRCPQEEGDSLDLTIGDVLAAD LGVGS ESSHEMEEKPETGGKSARWEGRRGSGEEQGLD GRDGKTDV+DGRKDVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDG SPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKG Sbjct: 1 NVDLFSKKMVLVPINEALHWSLAVLCNLDRVQSLVDPATEPLTADDEGKAPIETPVHKKSKRKRLRKSATMEGENASWLKEKHLDRWGEGEGGDRVVDVGVQESQEPGDPPVVVSLGRKKKKWLSTRPQSAADSGSGLLVEARAAGGRQGEHVVGRESKDQTKHGAMDVGEPWSGDSSQSKEEKEGDRCPQEEGDSLDLTIGDVLAADELGVGSMESSHEMEEKPETGGKSARWEGRRGSGEEQGLDRGRDGKTDVEDGRKDVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGPSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKG 403
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|299470451|emb|CBN78443.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.0485 bits (227), Expect = 5.218e-15 Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 0 Query: 746 SRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKY 874 ++PC++F+DSL H A +I+ L YL+ +WK G G F ++ FP+++PRVPTQ N CDCGV++L+Y + + P + T + RL R ++FS D+ R+ L+ + +V+Y Sbjct: 477 AQPCMLFLDSLDMHYASRIYDYLRRYLQAKWKET---GRGEMLF-DQDVFPLVRPRVPTQINGCDCGVYVLRYAKEICQQ-WPVV---TAAEVKNRLSAHFRPELFSPSDITEERRMLRELLENCKVRY 597 HSP 2 Score: 75.0998 bits (183), Expect = 8.041e-10 Identity = 29/45 (64.44%), Postives = 38/45 (84.44%), Query Frame = 0 Query: 466 YEAAHSLVQRWTKNVDLFSKKMVLVPINEALHWSLAVLCNLDQVQ 510 ++AA+S VQ WT+NVDLF KK VLVP+ E +HWSLA LCNLD+++ Sbjct: 420 FDAAYSKVQHWTRNVDLFKKKFVLVPVVEDMHWSLACLCNLDKLE 464
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|676398555|ref|XP_009042555.1| (hypothetical protein AURANDRAFT_68602 [Aureococcus anophagefferens] >gi|323446666|gb|EGB02745.1| hypothetical protein AURANDRAFT_68602 [Aureococcus anophagefferens]) HSP 1 Score: 82.4185 bits (202), Expect = 2.217e-12 Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 0 Query: 749 CLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVL---PTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYG 875 C++FMDSL H A K+ L +L++EW +RK P + K P++ P+VP Q NSCDCGV++L+Y E L+ + PT+A T+ A+ + A F+ +V +R L+A ++L K G Sbjct: 419 CIIFMDSLKMHSAPKVERFLRAFLELEWAKRK-PDEPELKLKLKVDLPLVVPKVPMQTNSCDCGVYVLRYAEEFLSRAVGAAPTVAV-TEAAVDDKFAAHDFASWFTAAEVAAMRGDLKAAAEDLARKTG 546
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|698811442|ref|XP_009838750.1| (hypothetical protein H257_13031 [Aphanomyces astaci] >gi|574106383|gb|ETV71901.1| hypothetical protein H257_13031 [Aphanomyces astaci]) HSP 1 Score: 82.8037 bits (203), Expect = 2.376e-12 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0 Query: 743 DVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPF-LSKETFPVIKPR-VPTQDNSCDCGVFILKYGEMMLAD 825 D RPC+VF+DSL AHR +I L YL++EW+ RKAP G P ++ P+I PR +P Q N DCGVF+L Y E L++ Sbjct: 477 DTNHRPCIVFLDSLKAHRTLRIAKFLREYLQMEWRARKAPTCG--PMSITVANLPMISPREIPRQSNYTDCGVFVLHYVEKFLSN 559
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|673039741|ref|XP_008873831.1| (hypothetical protein H310_09517 [Aphanomyces invadans] >gi|574470612|gb|ETV97622.1| hypothetical protein H310_09517 [Aphanomyces invadans]) HSP 1 Score: 82.8037 bits (203), Expect = 2.638e-12 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 743 DVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMML 823 D RPC+VF+DSL AHR ++ L YL++EW+ RKAP G+ F + + P +P Q N DCGVF+L Y E+ L Sbjct: 730 DENHRPCVVFLDSLKAHRTGRVSYFLREYLQMEWRARKAPTCGVMAFNAANLPAICPPEIPRQANYTDCGVFVLHYVELFL 810
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|397576797|gb|EJK50389.1| (hypothetical protein THAOC_30652 [Thalassiosira oceanica]) HSP 1 Score: 81.2629 bits (199), Expect = 1.057e-11 Identity = 56/169 (33.14%), Postives = 81/169 (47.93%), Query Frame = 0 Query: 740 DVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFP-----VIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIR---ADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKGEETGKLIKKEEMITGKEEE 900 DV PCL+F+DSL H ++I LL +L EWK +K + S L + F +I P+VP Q+N CDCGVF+ +Y + + T+ W + RL+ I A F ED+ +R + + LE +Y + KGEE K K + K EE Sbjct: 829 DVSSECEHPCLLFLDSLKMHNKNQIRKTLLKWLNAEWKAKKKGEEDDSGILPHDPFQNNSMNLIVPKVPYQENGCDCGVFVCRYAYALYV-MRFTVFSWDH--IENRLKILITKGPAFRFDMEDIARIRIEIGTLIKRLEKEY--RAVKGEE--KREKNRSKMAAKSEE 990
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|1210520431|dbj|GAX20862.1| (sentrin-specific protease 7 [Fistulifera solaris]) HSP 1 Score: 79.337 bits (194), Expect = 3.672e-11 Identity = 41/131 (31.30%), Postives = 68/131 (51.91%), Query Frame = 0 Query: 748 PCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKAPGDGLSPFLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARW----TKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKY 874 PCL+F DSL H+ D++H + +L EW R + +PF ++ + PV+ P+VP Q+NS DCGVF+ +Y + T + K A+ R +F F+ +D+ LR+ ++ + L Y Sbjct: 881 PCLLFFDSLKMHQKDRVHRNVTKWLNAEWLRLRKSSGVEAPF-NESSLPVLTPKVPYQNNSWDCGVFVCRYASGLFQLRNRTFSYIELVEEKIAMISRGAEF----KFTLDDIANLREEMKVLIERLSALY 1006
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|298707949|emb|CBJ34276.1| (SUMO deconjugating cysteine peptidase Ulp2 [Ectocarpus siliculosus]) HSP 1 Score: 69.707 bits (169), Expect = 4.388e-11 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0 Query: 461 REEEKYEAAHSLVQRWTKNVDLFSKKMVLVPINEALHWSLAVLCNLDQVQSLV 513 R ++AA+S VQRW V++F+KK VLVP+ E LHWSL+ LCNLDQ+Q+ V Sbjct: 11 RSFSDFDAAYSSVQRWYGGVNIFTKKFVLVPVVEDLHWSLSCLCNLDQLQTRV 63
BLAST of EWM27573.1 vs. NCBI_GenBank
Match: gi|1013934567|gb|KYQ88279.1| (hypothetical protein DLAC_10970 [Dictyostelium lacteum]) HSP 1 Score: 78.1814 bits (191), Expect = 6.902e-11 Identity = 43/150 (28.67%), Postives = 75/150 (50.00%), Query Frame = 0 Query: 740 DVVDVGSRPCLVFMDSLSAHRADKIHTALLNYLKVEWKRRKA-PGDGLSP--FLSKETFPVIKPRVPTQDNSCDCGVFILKYGEMMLADVLPTLARWTKRALACRLRDFIRADVFSQEDVDGLRKTLQARFQELEVKYGEQGEKGEETGK 886 D +RP +++DSL + R+ I + YL +EWK +K+ P +GL P + + P+ + RVP QDN CDCGVF+L Y E+ R ++ L+ + D F +D++ R+ ++ + L ++ + E + K Sbjct: 448 DTATSSNRPTFIYLDSLDSQRSAVITKKIRQYLSLEWKNKKSIPSNGLIPEKQFNNKNLPIKRGRVPKQDNLCDCGVFLLHYAEL--------FCRAPEKNFDEPLK---KPDWFKNQDINDKREIIKTIIKRLALEQSDHTEDADYDDK 586 The following BLAST results are available for this feature:
BLAST of EWM27573.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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