EWM27603.1, cds3063 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|585109871|gb|EWM27603.1| (Micro-fibrillar-associated 1 [Nannochloropsis gaditana]) HSP 1 Score: 747.658 bits (1929), Expect = 0.000e+0 Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 Query: 1 MMFGKRDLGLALSDKVEDNVLTHTHDDTAADVGKKEEEPVEEDEEDEEEEDAIARRRAAIRERLKSLRVEEEAATAAAEEEEEEAEEEEEEDSEYEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKKG 383 MMFGKRDLGLALSDKVEDNVLTHTHDDTAADVGKKEEEPVEEDEEDEEEEDAIARRRAAIRERLKSLRVEEEAATAAAEEEEEEAEEEEEEDSEYEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKKG Sbjct: 1 MMFGKRDLGLALSDKVEDNVLTHTHDDTAADVGKKEEEPVEEDEEDEEEEDAIARRRAAIRERLKSLRVEEEAATAAAEEEEEEAEEEEEEDSEYEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKKG 383
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|673029800|ref|XP_008868861.1| (hypothetical protein H310_05807 [Aphanomyces invadans] >gi|574475256|gb|ETW02256.1| hypothetical protein H310_05807 [Aphanomyces invadans]) HSP 1 Score: 174.096 bits (440), Expect = 2.171e-46 Identity = 115/225 (51.11%), Postives = 153/225 (68.00%), Query Frame = 0 Query: 113 LARPVFIPKGKRELDRDREREEQEEVEKER-KAAAARESRRR-ETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSD--RPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTT 333 + +P+F+PK R D RE+EE+ +ER KA AAR ++ E+R +VAE +++E AV M+ +D+ PDD+D PE++ E W LREL R+KR+ +AR+ RE++ AE RRR MT+ ER+ ED LG + + EK KWKFMQKYYHKGAFY+D++SV +DVRRR ADE T EDK NR LP+VMQVKNFG++G+TKYTHL DQDTT Sbjct: 207 ILKPIFVPKEAR--DTIREQEEKLRALEERDKALAARAVEKKAESRKLVAEVLQREESDAVQR---MQEEATDSEMPDDTDGLNPEQEQKE---WELRELRRLKRDRDAREEREREAAETLRRRNMTDEEREKEDAALG------KRTEKEKKKWKFMQKYYHKGAFYVDDKSVTSENDVRRREADEPTLEDKTNRENLPAVMQVKNFGKSGRTKYTHLTDQDTT 417
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|1026949983|ref|XP_016612982.1| (hypothetical protein SPPG_00633 [Spizellomyces punctatus DAOM BR117] >gi|907099707|gb|KND04943.1| hypothetical protein SPPG_00633 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 169.474 bits (428), Expect = 4.838e-45 Identity = 115/260 (44.23%), Postives = 158/260 (60.77%), Query Frame = 0 Query: 112 ALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGG-KGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVW-QQMDQDKR-FGMVGDAKNKFVHKLA 368 L +PVFIPK RE ++ER E E E E + E R++E+ MVAEE+RKE A S G +E DD+D E+ E+ W+LREL R+KR+ E + +RE +KA++ RRR MT+ E AE AK+G EK+K++F+QKYYHKGAF++D++ V + ++RR E T EDKF++ LP+VMQVKNFGRAGQTKYTHL DQDT++ + S W Q+ + +KR +G K F A Sbjct: 172 TLLKPVFIPKNHRETVLEKERLEAEAQEAEARKQQQMEERKKESHDMVAEELRKEQAAAEVSNGPLEV--------DDTDGINEEE-EYLAWKLRELRRIKRDREEKDSREAEKADIERRRNMTDQEVMAEK--------AKEGQLTKEKSKYRFLQKYYHKGAFFVDDDVVGKA--LQRRDFAEPTLEDKFDKTVLPAVMQVKNFGRAGQTKYTHLADQDTSQMD-----SPWFQKSELNKRTVSKLGGMKQSFSKPTA 407
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|970628022|gb|KUF75783.1| (Microfibrillar-associated protein 1 [Phytophthora nicotianae] >gi|970664210|gb|KUG01189.1| Microfibrillar-associated protein 1 [Phytophthora nicotianae]) HSP 1 Score: 169.088 bits (427), Expect = 2.710e-44 Identity = 123/288 (42.71%), Postives = 179/288 (62.15%), Query Frame = 0 Query: 95 YEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKK 382 YE ++++SE + L +PVF+PK R + +E EE ++++ E+R+ E+R +VAEEVR+E +GA + +D PDD+D + A E+ +W LRE+ R+KR+ + ++ R K++ E RRR MTE ER AED +L K+ EK K KFMQKYYHKGAFY+D++S+ DDVR+R A EAT EDKFN+ LP+VMQVKNFGRAG+TKYTHL DQDT+ + S+W + D G+ + K+ L+G +ID + +R++K Sbjct: 223 YETDTDDSE-----PVEELMKPVFVPKKARGTVKRQEELAAEEERRQKREHEKMEARKMESRRLVAEEVRREQDGADKDDS------TDVEMPDDTDG-LDPAQEYRDWELREMRRIKRDRDRKEQRRKEEEETQRRRNMTEEERAAEDAKL------KKNEPKEKNKLKFMQKYYHKGAFYVDDDSIRSKDDVRKRDATEATLEDKFNKEMLPAVMQVKNFGRAGRTKYTHLADQDTSSRD-----SLWARND-----GI----REKYKSHLSGMKNIDGSTKRRRK 478
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|568021344|gb|ETL95434.1| (hypothetical protein L917_06730 [Phytophthora parasitica]) HSP 1 Score: 169.088 bits (427), Expect = 2.884e-44 Identity = 123/288 (42.71%), Postives = 180/288 (62.50%), Query Frame = 0 Query: 95 YEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKK 382 YE ++++SE + L +PVF+PK R + +E EE ++++ E+R+ E+R +VAEEVR+E +GA + +D PDD+D + A E+ +W LRE+ R+KR+ + ++ R+K++ E RRR MTE ER AED +L K+ EK K KFMQKYYHKGAFY+D++S+ DDVR+R A EAT EDKFN+ LP+VMQVKNFGRAG+TKYTHL DQDT+ + S+W + D G+ + K+ L+G +ID + +R++K Sbjct: 223 YETDTDDSE-----PVEELMKPVFVPKKARGTVKRQEELAAEEERRQKREHEKMEARKMESRRLVAEEVRREQDGADKDDS------TDVEMPDDTDG-LDPAQEYRDWELREMRRIKRDRDRKEQRKKEEEETQRRRNMTEEERAAEDAKL------KKNEPKEKNKLKFMQKYYHKGAFYVDDDSIRSKDDVRKRDATEATLEDKFNKEMLPAVMQVKNFGRAGRTKYTHLADQDTSSRD-----SLWARND-----GI----REKYKSHLSGMKNIDGSTKRRRK 478
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|566026083|gb|ETI48994.1| (hypothetical protein F443_07013 [Phytophthora parasitica P1569] >gi|567963363|gb|ETK88862.1| hypothetical protein L915_06914 [Phytophthora parasitica] >gi|567992061|gb|ETL42260.1| hypothetical protein L916_06862 [Phytophthora parasitica] >gi|568051734|gb|ETM48633.1| hypothetical protein L914_06821 [Phytophthora parasitica] >gi|570329784|gb|ETO77732.1| hypothetical protein F444_07080 [Phytophthora parasitica P1976] >gi|570953504|gb|ETP18761.1| hypothetical protein F441_07025 [Phytophthora parasitica CJ01A1] >gi|570988214|gb|ETP46681.1| hypothetical protein F442_07076 [Phytophthora parasitica P10297]) HSP 1 Score: 169.088 bits (427), Expect = 2.884e-44 Identity = 123/288 (42.71%), Postives = 179/288 (62.15%), Query Frame = 0 Query: 95 YEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKK 382 YE ++++SE + L +PVF+PK R + +E EE ++++ E+R+ E+R +VAEEVR+E +GA + +D PDD+D + A E+ +W LRE+ R+KR+ + ++ R K++ E RRR MTE ER AED +L K+ EK K KFMQKYYHKGAFY+D++S+ DDVR+R A EAT EDKFN+ LP+VMQVKNFGRAG+TKYTHL DQDT+ + S+W + D G+ + K+ L+G +ID + +R++K Sbjct: 223 YETDTDDSE-----PVEELMKPVFVPKKARGTVKRQEELAAEEERRQKREHEKMEARKMESRRLVAEEVRREQDGADKDDS------TDVEMPDDTDG-LDPAQEYRDWELREMRRIKRDRDRKEQRRKEEEETQRRRNMTEEERAAEDAKL------KKNEPKEKNKLKFMQKYYHKGAFYVDDDSIRSKDDVRKRDATEATLEDKFNKEMLPAVMQVKNFGRAGRTKYTHLADQDTSSRD-----SLWARND-----GI----REKYKSHLSGMKNIDGSTKRRRK 478
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|675189417|ref|XP_008903593.1| (hypothetical protein PPTG_10100 [Phytophthora parasitica INRA-310] >gi|568096359|gb|ETN11110.1| hypothetical protein PPTG_10100 [Phytophthora parasitica INRA-310]) HSP 1 Score: 168.703 bits (426), Expect = 3.166e-44 Identity = 123/288 (42.71%), Postives = 180/288 (62.50%), Query Frame = 0 Query: 95 YEEESEESEEERAGGLFALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDIDQAGRRKKK 382 YE ++++SE + L +PVF+PK R + +E EE ++++ E+R+ E+R +VAEEVR+E +GA + +D PDD+D + A E+ +W LRE+ R+KR+ + ++ R+K++ E RRR MTE ER AED +L K+ EK K KFMQKYYHKGAFY+D++S+ DDVR+R A EAT EDKFN+ LP+VMQVKNFGRAG+TKYTHL DQDT+ + S+W + D G+ + K+ L+G +ID + +R++K Sbjct: 223 YETDTDDSE-----PVEELMKPVFVPKKARGTVKRQEELAAEEERRQKREHEKMEARKMESRRLVAEEVRREQDGADKDDS------TDVEMPDDTDG-LDPAQEYRDWELREMRRIKRDRDRKEQRKKEEEETQRRRNMTEEERAAEDAKL------KKNEPKEKNKLKFMQKYYHKGAFYVDDDSIRSKDDVRKRDATEATLEDKFNKEMLPAVMQVKNFGRAGRTKYTHLADQDTSSRD-----SLWARND-----GI----REKYKSHLSGMKNIDGSTKRRRK 478
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|831574899|ref|XP_012736220.1| (microfibrillar-associated protein 1 [Fundulus heteroclitus]) HSP 1 Score: 158.688 bits (400), Expect = 8.906e-41 Identity = 115/270 (42.59%), Postives = 155/270 (57.41%), Query Frame = 0 Query: 115 RPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVW-QQMDQDKRFGMVGDAKNKFVHKLAGTGDI-DQAGRRKKK 382 +PVFI K R +RE EEQ++ E E +A E RRR T +V EE +KE E + A+E +D ++ E+W++REL R+KR+ EAR+ EK+KAE+ R +TE ER AE R G V K +K K+KF+QKYYH+GAF+MDEE +DV +R T ED FN+ LP VMQVKNFGR+G+TKYTHL+DQDTT + S W Q+ Q+ +F F K AG D+ D+ +K+K Sbjct: 202 KPVFIRKKDRITVAEREAEEQKQRELEAEAKKQAEERRRYTLKIVEEEAKKEFEENRRTLAALEALDTDGENEEEEY---------ESWKVRELKRIKRDREARETMEKEKAEIDRFHNLTEEERRAELRNSGKLV----TNKAQKGKYKFLQKYYHRGAFFMDEE-----EDVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFD-----SAWAQESAQNNKF---------FKQKAAGVRDVFDRPTVKKRK 439
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|1183363622|gb|ORX90374.1| (hypothetical protein K493DRAFT_318034 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 157.918 bits (398), Expect = 1.709e-40 Identity = 117/272 (43.01%), Postives = 160/272 (58.82%), Query Frame = 0 Query: 112 ALARPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVWQQMDQDKRFGMVGDAKNKFVHKLAGTGDI-DQAGRRKKK 382 + +PVFIPK R ++E +E+EE EK ++ E+R++E+RLM AEEVR+E E E D DD+D +E+A E+E W+LREL R+KR+ E R A EK++AE+ RRR M E +R AED L K+ K E+ K FMQKY+HKGAFYMD+ + +V R E T ++ N+ +LP V+QVKNFGRAGQTKYTHL+DQDT+ K +Q + KR V K+ G D+ D+ R+K K Sbjct: 183 PMLKPVFIPKVHRVTMSEKELKEKEEEEKLKEKELELEARKKESRLMAAEEVRREIENP--DEDETSNRPPDI---DDTDGLDEEA-EYEAWKLRELQRIKRDREERLALEKERAEIERRRAMPEKQRLAED--LAYVREQKESKKKERGKPIFMQKYFHKGAFYMDQGA-----EVLNRDFAEPTPDEIRNKQSLPKVLQVKNFGRAGQTKYTHLVDQDTS----SKDAPWFQNSELTKR----------SVSKMGGMHDVFDKPTRKKSK 427
BLAST of EWM27603.1 vs. NCBI_GenBank
Match: gi|1041132093|ref|XP_017290493.1| (PREDICTED: microfibrillar-associated protein 1 [Kryptolebias marmoratus]) HSP 1 Score: 157.918 bits (398), Expect = 2.115e-40 Identity = 114/271 (42.07%), Postives = 153/271 (56.46%), Query Frame = 0 Query: 115 RPVFIPKGKRELDRDREREEQEEVEKERKAAAARESRRRETRLMVAEEVRKESEGAVGSEGAMEGYGSDAGAPDDSDRPEEDALEFENWRLRELARMKREMEARQAREKDKAEVARRRGMTEAERDAEDRRLGVGVYAKQGGKGEKAKWKFMQKYYHKGAFYMDEESVARPDDVRRRAADEATGEDKFNRAALPSVMQVKNFGRAGQTKYTHLLDQDTTRAEKHKTGSVW-QQMDQDKRFGMVGDAKNKFVHKLAGTGDI-DQAGRRKKKG 383 +PVFI K R +RE EEQ++ E E +A E RRR T +V EE +KE E + A+E +D ++ E W++REL R+KR+ EAR+ EK+KAE+ R +TE ER AE R G + K K K+KF+QKYYH+GAF++DEE DDV +R T ED FN+ LP VMQVKNFGR+G+TKYTHL+DQDTT + S W Q+ Q+ +F F K AG D+ D+ +K+K Sbjct: 204 KPVFIRKKDRVTVAEREAEEQKQRELEAEAKKQAEERRRYTLKIVEEEAKKEFEENRRTLAALEALDTDGENEEEEY---------EAWKVRELKRIKRDREARETMEKEKAEIERFHSLTEEERRAEVRNSGKVI----TNKASKGKYKFLQKYYHRGAFFLDEE-----DDVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFD-----SAWAQESAQNSKF---------FKQKAAGVRDVFDRPTVKKRKA 442 The following BLAST results are available for this feature:
BLAST of EWM27603.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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