EWM27618.1, cds3056 (CDS) Nannochloropsis gaditana

Overview
NameEWM27618.1
Unique Namecds3056
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:619700..619841 -
Alignment locationCM002460.1:619311..619529 -
Alignment locationCM002460.1:619016..619199 -
Alignment locationCM002460.1:618581..618861 -
Alignment locationCM002460.1:618185..618510 -
Alignment locationCM002460.1:617822..618143 -
Alignment locationCM002460.1:617627..617771 -
Alignment locationCM002460.1:617526..617547 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27618.1
Product24-sterol c-methyltransferase
Orig transcript idgnl|cribi|Naga_100069g3.5337.mrna
GeneSMT2
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:619700..619841 -
CM002460.1supercontigCM002460.1:619311..619529 -
CM002460.1supercontigCM002460.1:619016..619199 -
CM002460.1supercontigCM002460.1:618581..618861 -
CM002460.1supercontigCM002460.1:618185..618510 -
CM002460.1supercontigCM002460.1:617822..618143 -
CM002460.1supercontigCM002460.1:617627..617771 -
CM002460.1supercontigCM002460.1:617526..617547 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR030384MeTrfase_SMT
IPR029063SAM-dependent_MTases
IPR013216Methyltransf_11
Homology
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|585109886|gb|EWM27618.1| (24-sterol c-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 1145.95 bits (2963), Expect = 0.000e+0
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0
Query:    1 MSSTSGSRFPLLPILVSCASALAHKQLSSFPEHGRVAVVALVFAFCFGLYAILSLLLNMTCESDPLSETQKLMAKFTCQESKQGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRRGARHLYPYVFMCCEEAAKIITERRSRIASESLWTLDMNRECFALSEAKGQVCVVGRALAQCYRWMCTCGGSVVLIDPKERKKRKEALERTDRRKKTRPHTAMPRETVEGPASLCGHDDEEMSENAAREQGGGQVTWHRSLQQPGWKSEVSIVSVIFFARH 546
            MSSTSGSRFPLLPILVSCASALAHKQLSSFPEHGRVAVVALVFAFCFGLYAILSLLLNMTCESDPLSETQKLMAKFTCQESKQGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRRGARHLYPYVFMCCEEAAKIITERRSRIASESLWTLDMNRECFALSEAKGQVCVVGRALAQCYRWMCTCGGSVVLIDPKERKKRKEALERTDRRKKTRPHTAMPRETVEGPASLCGHDDEEMSENAAREQGGGQVTWHRSLQQPGWKSEVSIVSVIFFARH
Sbjct:    1 MSSTSGSRFPLLPILVSCASALAHKQLSSFPEHGRVAVVALVFAFCFGLYAILSLLLNMTCESDPLSETQKLMAKFTCQESKQGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRRGARHLYPYVFMCCEEAAKIITERRSRIASESLWTLDMNRECFALSEAKGQVCVVGRALAQCYRWMCTCGGSVVLIDPKERKKRKEALERTDRRKKTRPHTAMPRETVEGPASLCGHDDEEMSENAAREQGGGQVTWHRSLQQPGWKSEVSIVSVIFFARH 546          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|299469830|emb|CBN76684.1| (Sterol methyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 414.846 bits (1065), Expect = 6.397e-138
Identity = 196/322 (60.87%), Postives = 241/322 (74.84%), Query Frame = 0
Query:   63 SDPLSETQKLMAKFTCQESKQGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSK 384
            +DPL  T   +  F  QE  +GIKVDS I  YN+L DD  ++  +R  +Y+ LVNAYY+LATLFYEWGWG SFHFA+++R+E+F+ SI+RHEYYL  RL   R GA++LDCGCG+GGP RNIA+FTG  +TG+TIN+YQV RGNE+N   G++  CRS+QGDFM+LPF D SFDGVYAIEATCHAP R  V++EI+RVLKPG  FACYEWCLTDKFD  +  HRLIKKQIEEGDGLPD     E+D+AL+A GF+++ETRD AL+        GG  WY PLTPS+NV +QRFQF  +GM LT   L  +E   LAP GT+K
Sbjct:   66 TDPLEVTWTFIRGFFGQEKGRGIKVDSWITEYNRLHDDNESSVEEREGSYAKLVNAYYELATLFYEWGWGSSFHFASRWRNESFQDSIKRHEYYLGGRLGVSR-GAKVLDCGCGIGGPYRNIAQFTGADITGITINEYQVKRGNEVNKNMGVDQQCRSIQGDFMKLPFEDNSFDGVYAIEATCHAPQREGVYSEIYRVLKPGCVFACYEWCLTDKFDASNDKHRLIKKQIEEGDGLPDMITPPEVDSALKASGFEILETRDAALDPN-----PGGIPWYQPLTPSWNVFTQRFQFNWLGMRLTKAALYVMEMFYLAPAGTNK 381          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|551678397|ref|XP_005841951.1| (sterol methyltransferase [Guillardia theta CCMP2712] >gi|428186120|gb|EKX54971.1| sterol methyltransferase [Guillardia theta CCMP2712])

HSP 1 Score: 364.385 bits (934), Expect = 2.168e-119
Identity = 173/300 (57.67%), Postives = 218/300 (72.67%), Query Frame = 0
Query:   85 IKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSK 384
            I V+  ID YN L          RN  Y+ LVNAYY+L+TLFYE GWG SFHF+ +   E+F + +RRHEYYL S L  L+ G+++LD GCG+GGP+R+I RFTG  +TG+TIN+YQV R N+L A+ GL   CR++ GDF+ +P  + SFDGVYAIEATCHAPDR KV++E+FRVLKPG  FACYEWCLT+K+DK +  HR IKK+IEEGD LPD AYTHE+D A+ + GFD++ TRDM+L+   +        WYHPL PS+N   QRFQF PVG+ LTT  L+ LEF+ LAP GTSK
Sbjct:    8 IVVNKWIDEYNDLHKGEEPDA--RNVAYAKLVNAYYELSTLFYEVGWGTSFHFSYRMAGESFSEGMRRHEYYLTSFLGGLKPGSKVLDVGCGIGGPLRSITRFTGWDITGITINEYQVNRCNQLAARQGLSGQCRAILGDFLAIPAANNSFDGVYAIEATCHAPDRRKVYSEVFRVLKPGGYFACYEWCLTNKYDKNNQYHRWIKKKIEEGDALPDMAYTHEIDDAMRSSGFDILHTRDMSLDPNQK------FPWYHPLLPSWNPFVQRFQFNPVGLFLTTWGLRLLEFLWLAPKGTSK 299          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|676389219|ref|XP_009037888.1| (hypothetical protein AURANDRAFT_59110 [Aureococcus anophagefferens] >gi|323451378|gb|EGB07255.1| hypothetical protein AURANDRAFT_59110 [Aureococcus anophagefferens])

HSP 1 Score: 357.066 bits (915), Expect = 2.601e-116
Identity = 185/319 (57.99%), Postives = 222/319 (69.59%), Query Frame = 0
Query:   71 KLMAKFTCQESKQGIKVDSVIDGYNKLQ--DDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLS-QRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRR 386
            KL  +F    S    K    IDGYNKLQ  DDA     +RN+ Y+ALV++YYDLAT FYEWGWG  FHFA++   E F QS+ RHEYYLASRL  +  GA++LDCGCG+GGPMRNIARFT   VTG+TIN++QV RGN L A  G+  L +SVQGDFM LPFP+ASFDGVYAIEATCHAPDR K + EI+RVLKPG TFACYEWCLTD +D  +  H+ +KK IE GDGLPD  +T    AALEA GFD++E RD A +  ++    GG  W+ PL PS++ L   RFQF PV   L   +L   E +RL P GTSK +
Sbjct:   11 KLTVRFLSSLSTS--KKHGRIDGYNKLQEGDDA----GERNTEYAALVDSYYDLATEFYEWGWGACFHFADRRGGETFAQSLLRHEYYLASRL-AVSAGAKVLDCGCGIGGPMRNIARFTRAQVTGITINQFQVDRGNALCASEGVAHLAKSVQGDFMALPFPEASFDGVYAIEATCHAPDRAKCYGEIYRVLKPGATFACYEWCLTDAYDGSE-RHKKLKKDIEVGDGLPDLCHTSVCTAALEAAGFDVVEARDCAADGMLD----GGDPWHMPLVPSWHPLKWPRFQFNPVMYFLMPKILSFFELIRLVPAGTSKTQ 317          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|551561025|ref|XP_005767411.1| (sterol methyltransferase [Emiliania huxleyi CCMP1516] >gi|485617807|gb|EOD14982.1| sterol methyltransferase [Emiliania huxleyi CCMP1516])

HSP 1 Score: 339.347 bits (869), Expect = 2.341e-109
Identity = 174/331 (52.57%), Postives = 214/331 (64.65%), Query Frame = 0
Query:   57 LNMTCESDPLSETQKLMAKFTCQESKQGIKVDSVIDGYNKLQDDAHTTQTD-RNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRR 386
            ++ T +     + ++ M   + QE+KQGIKV S ID YN  Q D H    + R   Y+ LVN YY+LAT FYE GWGQSFHFAN+F  E F +SI RHEYYLA+RL  ++    +LDCGCG+GGP+RN+ RFTG  +TGVT+N+YQV RGN L  +AGL   C+ V+ DF +LPFPD SFD VY+IEA CH+PDR  V+ EI+RVLKPG  F  YEWCLT K    D  H L KK IEEGDGLPD   T   D +L  VGF ++ETRD AL+        GG  WY  LTPS+  L  R QFT +G       + CLE +RLAP G+ K R
Sbjct:    1 MSSTLQQTTAGKVRQFMGAASKQEAKQGIKVGSDIDRYNN-QHDLHGGDAEARKEGYADLVNTYYNLATDFYEIGWGQSFHFANKFAGETFNESITRHEYYLAARL-GIQPSDSVLDCGCGIGGPLRNLGRFTGASITGVTLNQYQVDRGNGLCTKAGLAPRCKLVKADFHKLPFPDNSFDHVYSIEACCHSPDRADVYREIYRVLKPGGCFVSYEWCLTKKHRDGDAQHMLSKKLIEEGDGLPDMMSTTHCDDSLVKVGFQVVETRDAALDPN-----PGGEAWYVILTPSFFNLF-RLQFTAIGTFFINVFMTCLEALRLAPAGSGKVR 323          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|1210529625|dbj|GAX11719.1| (sterol 24-C-methyltransferase [Fistulifera solaris])

HSP 1 Score: 332.798 bits (852), Expect = 3.787e-106
Identity = 164/337 (48.66%), Postives = 214/337 (63.50%), Query Frame = 0
Query:   55 LLLNMTCESDPLSETQKLMAKFTCQESK--QGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDN---LRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRR 386
            + + +   +DP+        + +  E +   G  V++ +D YN+L     T+  +RN  YS+LVN+YYDLAT+FYEWGWG SFHF+ Q+  E+F QSI+RHEY LA+ L +         +LD GCGVGGPMRN+ +F    +TG+T+N YQV RGNELN + GL     SVQGDFMQLPF + +FDG YAIEATCHAPDR   + +I+  LKPG  FACYEWCLTD+FD  +  H  +K+ IE G+GLPD   T     AL+A GF+ I  +D+AL   V+        WY PL PS+N LSQRFQF  +G  LT  ++  LEF  LAP GT K +
Sbjct:   35 MAVQLFTSADPIGRCFTFWRQLSAHEKRLTSGESVNNSVDKYNELHSTT-TSTNERNEQYSSLVNSYYDLATVFYEWGWGSSFHFSYQYPKESFHQSIQRHEYQLAAHLGSRCLSDPSTHILDVGCGVGGPMRNLCQFVAAKITGITLNPYQVQRGNELNQKTGLSHRATSVQGDFMQLPFENETFDGAYAIEATCHAPDRVACYQQIYDKLKPGAVFACYEWCLTDRFDPNNAEHVRMKRDIELGNGLPDITTTTVCWEALQAAGFEPIVEKDLALTPNVQ-------VWYTPLLPSWNPLSQRFQFNWLGAILTNIMIYSLEFFWLAPKGTIKTQ 363          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|1210520347|dbj|GAX20778.1| (sterol 24-C-methyltransferase [Fistulifera solaris])

HSP 1 Score: 332.798 bits (852), Expect = 4.501e-106
Identity = 164/337 (48.66%), Postives = 214/337 (63.50%), Query Frame = 0
Query:   55 LLLNMTCESDPLSETQKLMAKFTCQESK--QGIKVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDN---LRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRR 386
            + + +   +DP+        + +  E +   G  V+  +D YN+L   A T+  +RN  YS+LVN+YYDLAT+FYEWGWG SFHF+ Q+  E+F+ SI+RHEY LA+ L +         +LD GCGVGGPMRN+  F    +TG+T+N YQV RGNELN +AGL     SVQGDFMQLPF + +FDG YAIEATCHAPDR   + +I+  LKPG  FACYEWCLTD+FD  +  H  +K+ IE G+GLPD   T     AL+A GF+ +  +D+AL   V+        WY PL PS+N LSQRFQF  +G  LT  ++  LEF  LAP GT K +
Sbjct:   35 MAVQLFTSADPIGRCFTFWRQLSAHEKRLTSGESVNKSVDKYNELHS-ASTSTDERNEQYSSLVNSYYDLATVFYEWGWGSSFHFSYQYPAESFQHSIQRHEYQLAAHLGSRCLSDPSTHILDVGCGVGGPMRNLCHFVAAQITGITLNPYQVQRGNELNHKAGLSHRATSVQGDFMQLPFDNETFDGAYAIEATCHAPDRVACYKQIYDKLKPGAVFACYEWCLTDRFDPNNAEHVRMKRDIELGNGLPDITTTKVCWEALQAAGFEPVVEKDLALTPNVQ-------VWYTPLLPSWNPLSQRFQFNWLGAILTNIMIYSLEFFWLAPKGTIKTQ 363          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|397575868|gb|EJK49936.1| (hypothetical protein THAOC_31140 [Thalassiosira oceanica])

HSP 1 Score: 338.961 bits (868), Expect = 1.190e-105
Identity = 179/356 (50.28%), Postives = 228/356 (64.04%), Query Frame = 0
Query:   87 VDSVIDGYNKLQDDAHTTQTD-RNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRL------------------------DNLRTGA-------RLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNEL--------NAQA-GLETL-CRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMA-------LEMTVEELRA---------GGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSK 384
            V+S +  Y +L   A++T  D RN+NYS LVN+YYDLATLFYEWGWG SFHF+N+   E+F ++ RRHE+YLAS+L                        D  R G+       +++D GCG+GGPMRNI +FTG  VTG+T+N+YQV RGNEL        NA++ GL T+ CRSVQGDFM+ PF D+++D  YAIEATCHAPDR   ++EI+RVLKPG  FACYEWCLTD++D E+  H LIKKQIEEGDGLPD A TH    AL+  GF+++E RD          +    E R+         GG+ W  PL PS+N  +QRFQF   G+ LT   LK +EF+RLAP GTS+
Sbjct:  166 VESSVGEYERLH--ANSTGVDERNTNYSNLVNSYYDLATLFYEWGWGASFHFSNRHPHESFDEATRRHEFYLASKLNLSGALGRIGGDKRAAMNGDYKETDEAREGSTPSMANVKIIDVGCGIGGPMRNICKFTGADVTGLTLNQYQVDRGNELCKSDPHFANAKSDGLPTVRCRSVQGDFMKQPFDDSTYDAAYAIEATCHAPDRVGCYSEIYRVLKPGAVFACYEWCLTDRYDPENEEHVLIKKQIEEGDGLPDIASTHHCLTALKKAGFEILEERDCVNDEYGGWQDRATGEYRSDKEGRKHNRGGKPWMLPLMPSWNPFTQRFQFNWFGLRLTKYSLKVMEFLRLAPAGTSR 519          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|224006796|ref|XP_002292358.1| (sterol 24-C-methyltransferase, partial [Thalassiosira pseudonana CCMP1335] >gi|220972000|gb|EED90333.1| sterol 24-C-methyltransferase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 326.25 bits (835), Expect = 2.290e-104
Identity = 164/313 (52.40%), Postives = 210/313 (67.09%), Query Frame = 0
Query:   86 KVDSVIDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGA--RLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNEL-----------NAQAGLETL-CRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQRFQFTPVGMPLTTTLLKCLEFMRLAPTGTSK 384
             V S +  Y +L   + T+ T+RNSNY+ LVN+YYDLATLFYEWGWG SFHF+N+   E+F ++ RRHE+YLA +  +  + A  ++LD GCG+GGPMRNI +FTG  +TG+T+N+YQV RGNEL           +   GL  + CRS QGDFM+ PF  ++FD  YAIEATCHAPDR   ++EI+RVLKPG  FACYEWCLTDK+D  +  H LIKKQIEEGDGLPD A TH    AL+  GF+++E RD   +  +            PL  S+N  +QRFQF   G+ LT   LK +EF+RLAP GTS+
Sbjct:    2 NVQSSVSEYERLHLTS-TSTTERNSNYATLVNSYYDLATLFYEWGWGASFHFSNRHPHESFDEATRRHEFYLAMKEGSTPSMASVKVLDVGCGIGGPMRNICKFTGADITGLTLNQYQVDRGNELCRADAHFHNHSSETNGLPPIRCRSTQGDFMKQPFEASTFDAAYAIEATCHAPDRVGCYSEIYRVLKPGSIFACYEWCLTDKYDPNNEEHVLIKKQIEEGDGLPDIATTHYCLTALKKAGFEILEERDCVNDEML------------PLMSSWNPFTQRFQFNWFGLRLTKYSLKIMEFLRLAPVGTSR 301          
BLAST of EWM27618.1 vs. NCBI_GenBank
Match: gi|922858968|gb|KOO27041.1| (24-sterol c-methyltransferase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 324.324 bits (830), Expect = 6.496e-103
Identity = 161/300 (53.67%), Postives = 202/300 (67.33%), Query Frame = 0
Query:   91 IDGYNKLQDDAHTTQTDRNSNYSALVNAYYDLATLFYEWGWGQSFHFANQFRDENFRQSIRRHEYYLASRLDNLRTGARLLDCGCGVGGPMRNIARFTGLPVTGVTINKYQVGRGNELNAQAGLETLCRSVQGDFMQLPFPDASFDGVYAIEATCHAPDRTKVFAEIFRVLKPGQTFACYEWCLTDKFDKEDPAHRLIKKQIEEGDGLPDTAYTHEMDAALEAVGFDLIETRDMALEMTVEELRAGGRTWYHPLTPSYNVLSQ----RFQFTPVGMPLTTTLLKCLEFMRLAPTGTSKRR 386
            ID YN L DD  T+   RN+ Y  LVN+YY+LAT FYEWGWGQSFHFA + + E+F  SI RHEYYLA RL  ++    +LDCGCG+GGP+RNI RFT   VTGVT+N+YQV RGN L  +A L+  CR VQ DF +LPF +A+F+  Y+IEA CH+PDR  V++E+FRVLKPG  FA YEWCLT+K D  +  H   KK+IEEGDGLP    T   DAAL+  GF++IE+RD AL+        GG  WY  LT SYN+ S+    R QFT  G  +   +L  +EF+ +AP G+ K R
Sbjct:   62 IDKYNALHDDKKTSVEGRNAAYVDLVNSYYNLATDFYEWGWGQSFHFAERLQGEDFGMSIARHEYYLAMRL-GIKPSDHVLDCGCGIGGPLRNIGRFTSAKVTGVTLNQYQVDRGNRLCQEAHLDDRCRLVQADFHKLPFAEATFNSCYSIEACCHSPDRVDVYSEVFRVLKPGGYFASYEWCLTEKHDPLNERHVWSKKKIEEGDGLPGLTLTTSCDAALKRAGFEIIESRDAALDPN-----PGGEPWYKILTASYNLASREGLFRLQFTYWGTFMMNIVLNFMEFVGIAPRGSGKVR 355          
The following BLAST results are available for this feature:
BLAST of EWM27618.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109886|gb|EWM27618.1|0.000e+0100.0024-sterol c-methyltransferase [Nannochloropsis gad... [more]
gi|299469830|emb|CBN76684.1|6.397e-13860.87Sterol methyltransferase [Ectocarpus siliculosus][more]
gi|551678397|ref|XP_005841951.1|2.168e-11957.67sterol methyltransferase [Guillardia theta CCMP271... [more]
gi|676389219|ref|XP_009037888.1|2.601e-11657.99hypothetical protein AURANDRAFT_59110 [Aureococcus... [more]
gi|551561025|ref|XP_005767411.1|2.341e-10952.57sterol methyltransferase [Emiliania huxleyi CCMP15... [more]
gi|1210529625|dbj|GAX11719.1|3.787e-10648.66sterol 24-C-methyltransferase [Fistulifera solaris... [more]
gi|1210520347|dbj|GAX20778.1|4.501e-10648.66sterol 24-C-methyltransferase [Fistulifera solaris... [more]
gi|397575868|gb|EJK49936.1|1.190e-10550.28hypothetical protein THAOC_31140 [Thalassiosira oc... [more]
gi|224006796|ref|XP_002292358.1|2.290e-10452.40sterol 24-C-methyltransferase, partial [Thalassios... [more]
gi|922858968|gb|KOO27041.1|6.496e-10353.6724-sterol c-methyltransferase [Chrysochromulina sp... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3064rna3064Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications