EWM27600.1, cds3054 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|585109868|gb|EWM27600.1| (phosphoglycerate mutase [Nannochloropsis gaditana]) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
Query: 1 MDWTKQASIFRGMLWLALLASISTTFAFVGHLGPQTASITATARSGSYRTASNTLFMMAGDKKYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGKKLGNHLPKTFGSEYICGW 337
MDWTKQASIFRGMLWLALLASISTTFAFVGHLGPQTASITATARSGSYRTASNTLFMMAGDKKYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGKKLGNHLPKTFGSEYICGW
Sbjct: 1 MDWTKQASIFRGMLWLALLASISTTFAFVGHLGPQTASITATARSGSYRTASNTLFMMAGDKKYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGKKLGNHLPKTFGSEYICGW 337
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|675206683|ref|XP_008912226.1| (hypothetical protein PPTG_16444 [Phytophthora parasitica INRA-310] >gi|567951554|gb|ETK77252.1| hypothetical protein L915_16474 [Phytophthora parasitica] >gi|567980220|gb|ETL30688.1| hypothetical protein L916_16373 [Phytophthora parasitica] >gi|568087623|gb|ETN02492.1| hypothetical protein PPTG_16444 [Phytophthora parasitica INRA-310] >gi|570941611|gb|ETP06868.1| hypothetical protein F441_16794 [Phytophthora parasitica CJ01A1] >gi|970636506|gb|KUF81032.1| Cell 12A endoglucanase [Phytophthora nicotianae] >gi|970645540|gb|KUF85981.1| hypothetical protein AM587_10005916 [Phytophthora nicotianae] >gi|970656227|gb|KUF94264.1| Phosphatidate cytidylyltransferase [Phytophthora nicotianae]) HSP 1 Score: 385.185 bits (988), Expect = 8.055e-132 Identity = 180/257 (70.04%), Postives = 210/257 (81.71%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGK 319
KY+IVL+RHGES WN +NRFTGW+D LS KG E+ +AGK LKEA +FD+AYTSVL+RAI TLW LEE DLMWIPV ++WRLNERHYGAL GLNK+ETVDKHGIE+V IWRRSY PPP ++ SE+YPGNDPKYADV K +LP ESL TT R LP WE IIP IK GK+IVIAAHGN++RALV+HLDNI ED I GLN+PTGVPL+Y+LDEN KP+ H DAIAPL G+Y+GDQE+I+A+I GVA QT K
Sbjct: 4 KYQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLEADSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTKAK 260
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|568009722|gb|ETL83920.1| (hypothetical protein L917_16197 [Phytophthora parasitica]) HSP 1 Score: 384.8 bits (987), Expect = 1.248e-131 Identity = 179/257 (69.65%), Postives = 210/257 (81.71%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGK 319
KY+IVL+RHGES WN +NRFTGW+D LS KG E+ +AGK LKEA +FD+AYTSVL+RAI TLW LEE DLMWIPV ++WRLNERHYGAL GLNK+ETVDKHGIE+V +WRRSY PPP ++ SE+YPGNDPKYADV K +LP ESL TT R LP WE IIP IK GK+IVIAAHGN++RALV+HLDNI ED I GLN+PTGVPL+Y+LDEN KP+ H DAIAPL G+Y+GDQE+I+A+I GVA QT K
Sbjct: 4 KYQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMVWRRSYATPPPSLEADSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTKAK 260
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|566014116|gb|ETI37027.1| (hypothetical protein F443_16944, partial [Phytophthora parasitica P1569] >gi|568039620|gb|ETM37104.1| hypothetical protein L914_16306, partial [Phytophthora parasitica] >gi|570971889|gb|ETP34956.1| hypothetical protein F442_16787, partial [Phytophthora parasitica P10297]) HSP 1 Score: 385.185 bits (988), Expect = 1.539e-131 Identity = 180/257 (70.04%), Postives = 210/257 (81.71%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGK 319
KY+IVL+RHGES WN +NRFTGW+D LS KG E+ +AGK LKEA +FD+AYTSVL+RAI TLW LEE DLMWIPV ++WRLNERHYGAL GLNK+ETVDKHGIE+V IWRRSY PPP ++ SE+YPGNDPKYADV K +LP ESL TT R LP WE IIP IK GK+IVIAAHGN++RALV+HLDNI ED I GLN+PTGVPL+Y+LDEN KP+ H DAIAPL G+Y+GDQE+I+A+I GVA QT K
Sbjct: 18 KYQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLEADSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTKAK 274
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|570317810|gb|ETO65758.1| (hypothetical protein F444_16967 [Phytophthora parasitica P1976]) HSP 1 Score: 384.03 bits (985), Expect = 2.132e-131 Identity = 179/257 (69.65%), Postives = 210/257 (81.71%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGK 319
KY+IVL+RHGES WN +NRFTGW+D LS KG E+ +AGK LKEA +FD+AYTSVL+RAI TLW LEE DLMWIPV ++WRLNERHYGAL GLNK+ETVDKHGIE+V IWRRSY PPP ++ SE+YPGNDP+YADV K +LP ESL TT R LP WE IIP IK GK+IVIAAHGN++RALV+HLDNI ED I GLN+PTGVPL+Y+LDEN KP+ H DAIAPL G+Y+GDQE+I+A+I GVA QT K
Sbjct: 4 KYQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLEADSEYYPGNDPRYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTKAK 260
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|695421395|ref|XP_009528161.1| (hypothetical protein PHYSODRAFT_360745 [Phytophthora sojae] >gi|348674594|gb|EGZ14412.1| hypothetical protein PHYSODRAFT_360745 [Phytophthora sojae]) HSP 1 Score: 383.645 bits (984), Expect = 3.093e-131 Identity = 180/257 (70.04%), Postives = 210/257 (81.71%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGK 319
KY+IVL+RHGES WN +N+FTGW+D LS KG E+ +AGK LK A +FD+AYTSVL+RAI TLW LEE DLMWIPV ++WRLNERHYGAL GLNK+ETVDKHGIE+V IWRRSY PPP +D SSE+YPGNDPKYADV K +LP ESL TT R LP WE IIP IK GK+IVIAAHGN++RALV+HLDNI ED I GLN+PTGVPL+Y+LDEN KP+ H DAIAPL G+Y+GDQE+I+A+I GVA QT K
Sbjct: 4 KYQIVLIRHGESQWNVDNKFTGWHDVQLSEKGEHESHDAGKVLKAAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVVRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPDLDASSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDSITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTKAK 260
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|1214705534|gb|OWZ17215.1| (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Phytophthora megakarya]) HSP 1 Score: 382.874 bits (982), Expect = 8.098e-131 Identity = 178/257 (69.26%), Postives = 208/257 (80.93%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQTGGK 319
KY+IVL+RHGES WN +N+FTGW+D PLS KG E+ +AGK LKEA +FD+AYTSVL+RAI TLW LEE DLMWIPV ++WRLNERHYGAL GLNK+ETVDKHGIE+V IWRRSY PPP +D SE YPGND KYADV K +LP ESL TT R LP WE IIP IK GK+IVIAAHGN++RALV+HLDNI ED I GLN+PTGVPL+Y+LDEN KP+ H DAI PL G+Y+G+QE+I+A+I GVA QT K
Sbjct: 4 KYQIVLIRHGESQWNVDNKFTGWHDVPLSAKGETESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVTRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLDADSEFYPGNDAKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKDGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIGPLSGYYVGNQEEIKARIAGVANQTKAK 260
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|1173949793|gb|OQR97797.1| (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Achlya hypogyna]) HSP 1 Score: 381.333 bits (978), Expect = 3.127e-130 Identity = 174/254 (68.50%), Postives = 214/254 (84.25%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQT 316
KY+IVL+RHGES WN +N+FTGW+D PLS KG +E+ +AGKALK A +FD AYTSVL+RAI T W LEELDLMWIPV ++W+LNERHYGALQGLNK++TV K+GI+QV +WRRSYDIPPP +D++SE+YPGNDPKYA V + LP TESL+TTKAR +P W + I+P IK GK+IVI AHGN++RALVQHLDNIS+D I GLN+PTGVPL+Y+LDEN P+ H AIAPL GHY+G+Q++IRA+I GVA QT
Sbjct: 3 KYQIVLIRHGESQWNVDNKFTGWHDVPLSAKGEQESHDAGKALKAAGFKFDQAYTSVLKRAIKTCWNTLEELDLMWIPVTRSWKLNERHYGALQGLNKQDTVAKYGIDQVMVWRRSYDIPPPALDETSEYYPGNDPKYAHVPREELPFTESLETTKARVVPYWNDVIVPSIKEGKKIVIVAHGNSLRALVQHLDNISKDTITGLNIPTGVPLVYDLDENFVPVAHELAIAPLSGHYVGNQDEIRARIAGVANQT 256
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|1173949536|gb|OQR97561.1| (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Thraustotheca clavata]) HSP 1 Score: 380.563 bits (976), Expect = 5.463e-130 Identity = 175/254 (68.90%), Postives = 212/254 (83.46%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQT 316
KY+IVL+RHGES WN +N+FTGW+D PLS KG +E+ +AGK LK +FD AYTSVL+RAI T W LEELDLMWIPV ++W+LNERHYGALQGLNK++TV K+GI+QV +WRRSY IPPP +D+SSE+YPGNDPKYADV K LP+TESL TTK R +P W + I+P IK GK+IVI AHGN++RALVQHLDNISED I GLN+PTGVPL+Y+LDEN P+ H AIAPL GHY+G+Q++IRA+I GVAAQT
Sbjct: 3 KYQIVLIRHGESQWNVDNKFTGWHDVPLSTKGEQESHDAGKVLKANGYKFDQAYTSVLKRAIKTCWNTLEELDLMWIPVTRSWKLNERHYGALQGLNKQDTVAKYGIDQVMVWRRSYAIPPPALDESSEYYPGNDPKYADVPKDELPLTESLATTKLRVVPYWNDVIVPSIKEGKKIVIVAHGNSLRALVQHLDNISEDTITGLNIPTGVPLVYDLDENFVPVAHELAIAPLSGHYVGNQDEIRARIAGVAAQT 256
BLAST of EWM27600.1 vs. NCBI_GenBank
Match: gi|673052839|ref|XP_008880380.1| (hypothetical protein H310_14326 [Aphanomyces invadans] >gi|574463936|gb|ETV90991.1| hypothetical protein H310_14326 [Aphanomyces invadans]) HSP 1 Score: 379.793 bits (974), Expect = 1.033e-129 Identity = 173/254 (68.11%), Postives = 210/254 (82.68%), Query Frame = 0
Query: 63 KYKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQT 316
KY+IVL+RHGES WN +NRFTGW+D PLS G KE+ +AGK LK+A FD+AYTSVL+RAI T W LEELDLMWIPV ++W+LNERHYGALQGLNK++TV K+GI+QV +WRRSY PPP +D SSE+YPGNDPKYADV + LP TESL TTK R +P W + I+P +KAGK+++I AHGN++RALVQHLDNISED I GLN+PTGVPL+Y+LDEN KPI H AI+PL GHY+G+QE+IR +I GVA QT
Sbjct: 4 KYQIVLIRHGESQWNVDNRFTGWHDVPLSAVGEKESHDAGKVLKDAGFSFDVAYTSVLKRAIKTCWNTLEELDLMWIPVNRSWKLNERHYGALQGLNKQDTVAKYGIDQVMVWRRSYSTPPPALDASSEYYPGNDPKYADVPREELPFTESLATTKVRVVPYWNDVIVPSMKAGKKVLIVAHGNSLRALVQHLDNISEDTITGLNIPTGVPLVYDLDENFKPIVHEHAISPLSGHYVGNQEEIRGRIAGVANQT 257 The following BLAST results are available for this feature:
BLAST of EWM27600.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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