EWM27630.1, cds3032 (CDS) Nannochloropsis gaditana

Overview
NameEWM27630.1
Unique Namecds3032
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:551292..551396 -
Alignment locationCM002460.1:549889..551073 -
Alignment locationCM002460.1:549658..549816 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27630.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100059g19.8035.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:551292..551396 -
CM002460.1supercontigCM002460.1:549889..551073 -
CM002460.1supercontigCM002460.1:549658..549816 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27630.1 vs. NCBI_GenBank
Match: gi|585109900|gb|EWM27630.1| (hypothetical protein Naga_100059g19 [Nannochloropsis gaditana])

HSP 1 Score: 970.304 bits (2507), Expect = 0.000e+0
Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 0 
Query:    1 MASSGSLRMALGHRVVAKKYNHNIATAAEDPVSPEAMRVREGTGPGGHPLPRHQRRRSNLTDEASSALDEEEGTLEGAAAALEMEDESSRKVSTPSGMATRELGDGHPKTPSGPLSFTCCPNATSSPSCSSFAPEHPRRGPGPANSRSTVQPEDFRVSPSLLEMPTFPDDTEKSSILEQHVTRGTLGEEGAGTSESPSPSQRAALSSLYGLQAATSTLAEEKGEEDEGQLVQGREAHVGEVRQADEGAEGVSAFVEQFLARHYISDRPELKRYDSADAALAVARGGEKGARSGAGSHSRQSSALTISSHLKSELPFEDAVPPPAPSVLQAPPRLHGRRRSSEGFIEIQVANAPSSGPACSQEEAPEGWETGHSQGLSTGAIEEEEEEKRPRQALPQFSRFDSGDYFMQKDARARANEHPALEKSGAAEPGGTCMKERNRKNPESGKAISLLERSAEMHVKIDIGTGGQGARLCASYRRFAHC 482
            MASSGSLRMALGHRVVAKKYNHNIATAAEDPVSPEAMRVREGTGPGGHPLPRHQRRRSNLTDEASSALDEEEGTLEGAAAALEMEDESSRKVSTPSGMATRELGDGHPKTPSGPLSFTCCPNATSSPSCSSFAPEHPRRGPGPANSRSTVQPEDFRVSPSLLEMPTFPDDTEKSSILEQHVTRGTLGEEGAGTSESPSPSQRAALSSLYGLQAATSTLAEEKGEEDEGQLVQGREAHVGEVRQADEGAEGVSAFVEQFLARHYISDRPELKRYDSADAALAVARGGEKGARSGAGSHSRQSSALTISSHLKSELPFEDAVPPPAPSVLQAPPRLHGRRRSSEGFIEIQVANAPSSGPACSQEEAPEGWETGHSQGLSTGAIEEEEEEKRPRQALPQFSRFDSGDYFMQKDARARANEHPALEKSGAAEPGGTCMKERNRKNPESGKAISLLERSAEMHVKIDIGTGGQGARLCASYRRFAHC
Sbjct:    1 MASSGSLRMALGHRVVAKKYNHNIATAAEDPVSPEAMRVREGTGPGGHPLPRHQRRRSNLTDEASSALDEEEGTLEGAAAALEMEDESSRKVSTPSGMATRELGDGHPKTPSGPLSFTCCPNATSSPSCSSFAPEHPRRGPGPANSRSTVQPEDFRVSPSLLEMPTFPDDTEKSSILEQHVTRGTLGEEGAGTSESPSPSQRAALSSLYGLQAATSTLAEEKGEEDEGQLVQGREAHVGEVRQADEGAEGVSAFVEQFLARHYISDRPELKRYDSADAALAVARGGEKGARSGAGSHSRQSSALTISSHLKSELPFEDAVPPPAPSVLQAPPRLHGRRRSSEGFIEIQVANAPSSGPACSQEEAPEGWETGHSQGLSTGAIEEEEEEKRPRQALPQFSRFDSGDYFMQKDARARANEHPALEKSGAAEPGGTCMKERNRKNPESGKAISLLERSAEMHVKIDIGTGGQGARLCASYRRFAHC 482
The following BLAST results are available for this feature:
BLAST of EWM27630.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109900|gb|EWM27630.1|0.000e+0100.00hypothetical protein Naga_100059g19 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3040rna3040Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications