EWM27646.1, cds3031 (CDS) Nannochloropsis gaditana

Overview
NameEWM27646.1
Unique Namecds3031
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:544438..546035 +
Alignment locationCM002460.1:546214..547783 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27646.1
Productppgpp synthetase
Orig transcript idgnl|cribi|Naga_100059g18.8051.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:544438..546035 +
CM002460.1supercontigCM002460.1:546214..547783 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0015969guanosine tetraphosphate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR012676TGS-like
IPR004095TGS
IPR012675Beta-grasp_dom
IPR007685RelA_SpoT
IPR003607HD/PDEase_dom
Homology
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|585109916|gb|EWM27646.1| (ppgpp synthetase [Nannochloropsis gaditana])

HSP 1 Score: 2165.19 bits (5609), Expect = 0.000e+0
Identity = 1055/1055 (100.00%), Postives = 1055/1055 (100.00%), Query Frame = 0
Query:    1 MEQKGQTSKTTSCTGSASNMRLPSSGISVRTNRRGHKDLPLYLICIAIVLPWASCFAPALPWSSSWTLGCPKMAKAPFPYPMAGTFSRKRCFGKVFDVPRPQLAQSFSNTSEAASSRSSSSGWLDAWSLLLKEIRPPIPSGAPKSFVELVRTDRKGRKRTLSPAVKDAEMRELVGRLWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYESTVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLDVNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAVVMQNAAFLQEKLGAVPTPEDLMRSVKAHTGYASLQEMYFQVALSVDYHETGAMLGRVLGLDAESAHALDLAPLMAASEGERSELLHRSRARGEQEPLFLLSLNGRETFRLCPVCRPVDGDPLTGMRVWEEPHGEVTVVHRADKACPQLQAAEESTLGAVGGERSRLVQTRRVDVYPEKFNVDDDDGYFPVSLEVRARQQRLYVLSNLVASLEACEAMLLDVALGDFDGQPARQGTRDLVGGGRKGTEGIKVKGAEGELVIRFLIGVHNLAHVERVLAGFRSVGGVLHAARSDLLGAALDPRPRGVREHDVHQCGMALEEHERGEANGEEGPGNRYDYAV 1055
            MEQKGQTSKTTSCTGSASNMRLPSSGISVRTNRRGHKDLPLYLICIAIVLPWASCFAPALPWSSSWTLGCPKMAKAPFPYPMAGTFSRKRCFGKVFDVPRPQLAQSFSNTSEAASSRSSSSGWLDAWSLLLKEIRPPIPSGAPKSFVELVRTDRKGRKRTLSPAVKDAEMRELVGRLWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYESTVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLDVNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAVVMQNAAFLQEKLGAVPTPEDLMRSVKAHTGYASLQEMYFQVALSVDYHETGAMLGRVLGLDAESAHALDLAPLMAASEGERSELLHRSRARGEQEPLFLLSLNGRETFRLCPVCRPVDGDPLTGMRVWEEPHGEVTVVHRADKACPQLQAAEESTLGAVGGERSRLVQTRRVDVYPEKFNVDDDDGYFPVSLEVRARQQRLYVLSNLVASLEACEAMLLDVALGDFDGQPARQGTRDLVGGGRKGTEGIKVKGAEGELVIRFLIGVHNLAHVERVLAGFRSVGGVLHAARSDLLGAALDPRPRGVREHDVHQCGMALEEHERGEANGEEGPGNRYDYAV
Sbjct:    1 MEQKGQTSKTTSCTGSASNMRLPSSGISVRTNRRGHKDLPLYLICIAIVLPWASCFAPALPWSSSWTLGCPKMAKAPFPYPMAGTFSRKRCFGKVFDVPRPQLAQSFSNTSEAASSRSSSSGWLDAWSLLLKEIRPPIPSGAPKSFVELVRTDRKGRKRTLSPAVKDAEMRELVGRLWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYESTVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLDVNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAVVMQNAAFLQEKLGAVPTPEDLMRSVKAHTGYASLQEMYFQVALSVDYHETGAMLGRVLGLDAESAHALDLAPLMAASEGERSELLHRSRARGEQEPLFLLSLNGRETFRLCPVCRPVDGDPLTGMRVWEEPHGEVTVVHRADKACPQLQAAEESTLGAVGGERSRLVQTRRVDVYPEKFNVDDDDGYFPVSLEVRARQQRLYVLSNLVASLEACEAMLLDVALGDFDGQPARQGTRDLVGGGRKGTEGIKVKGAEGELVIRFLIGVHNLAHVERVLAGFRSVGGVLHAARSDLLGAALDPRPRGVREHDVHQCGMALEEHERGEANGEEGPGNRYDYAV 1055          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|1210526390|dbj|GAX14878.1| (GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fistulifera solaris])

HSP 1 Score: 505.368 bits (1300), Expect = 5.647e-159
Identity = 340/925 (36.76%), Postives = 482/925 (52.11%), Query Frame = 0
Query:   42 YLICIAIVLP-WASCFAPALPWSSSWTLGCPKMAKAPFPYPMAGTFSRKRCFGKVFDVPRPQLAQSFSNTSEAASSRSSSSGWLDAWSLLLKEIRPPIPSGAPKSFVELVRTDRKGRKRTLSPAVKDAEMRELVGRLWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKL------------GSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLE-RKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVI---SLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYE---STVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSP-SRGPGKSVSHYRTAWLTCLKDWQLD-VNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAV------VMQNAAFLQEKLGAVPTPEDLMRSVKAHTGYASLQEMYFQVALSVD---YHETGAML----GRVLGLDAESAHALDLAPLMAASEGERSELLHRSRARGEQEPLFLLSLNGRETF-----------------------------------RLCPVCRPVDGDPLTGMRVWEEPHGE----VTVVHRADKACPQLQAAEESTLGAVGGERSRLVQTRRVDVYP 892
            + +CI + LP +   F      SS+W L    +  +PFP   + +  ++R    V           + + +E     +S       WS      RP                         +P   D ++++ + + W  ++P + YL  ++V K+  AL+V+  AH GQ RKSG PFI HPV+VA +LAGL MD +T+ AGLLHDTVEDT +  ++I  +FG+ V+ IVEGETKVSKL K+              SP  ++E QAENLR +F+AMT DYR+I VKLADRLHNMRTL  M P KQ+KISRETLDI+APLA R+G+   KSELED AF Y+YPQE   ++ ML      Y + L  + + + + L+    L+ Q     + V GR K+ YS+W KM     ET+   +LD+I DVVA+R+VI   S   L DE ES+   RG++LC+ V+ LVQ HL  PG++   + V+DY+S PK NGYQSLH  ++ NGQ +EVQIRT +MH VAE G+A+HW Y DE+RR          SP SR P      Y T WL+ +K+WQ D +++RDFV++VR E+LG+RV  FL+NG+I +L RGAT +DA F++H ++GL++   E+NG P+    Y +QNGDV+ ++  +  KPS  W+R A  R+TR K+R+YFR+ +     E G  L+         ++   ++ +  L      ED+ R +   T + +L ++   +    D    H   + L     RVL +DAE    L + P    SE   + + +R RA          S N    F                                   +LC  C PV GD + G        G+    VT VHR    C   Q A       + G   R V+ R V   P
Sbjct:   17 FAVCILLCLPNYCQAFLSRTSVSSAWQLQMSAVPASPFPNYTSSSDLKQRNDTIV----SLNWGTPYLHNNENIQKNTS-------WSSFDTFDRP-------------------------TPLNTDDDLQQ-IEQYWDQIMPTVNYLGTEKVAKIYHALQVAYTAHRGQMRKSGEPFIIHPVQVAILLAGLKMDGETVIAGLLHDTVEDTEMTFDQIETLFGKTVRTIVEGETKVSKLPKMVAEYSSSEDALISESPTHHDE-QAENLRQMFVAMTEDYRIIIVKLADRLHNMRTLRHMKPLKQIKISRETLDIFAPLAHRMGIWQFKSELEDTAFMYLYPQEHKRLNRMLRQHQTKYRETLDKSQLVMQRRLDADSTLAHQAA--KVEVQGRTKELYSLWHKM-----ETKGVHNLDNIVDVVALRVVITPKSDADLGDENESD---RGVWLCYHVLGLVQ-HL--PGFQPVPTRVKDYISFPKPNGYQSLHTALILNGQTIEVQIRTSYMHQVAEYGMASHWAYTDEKRR----------SPSSRNPD---GLYFTPWLSSIKEWQKDRISSRDFVDSVRRELLGKRVFVFLRNGKILNLARGATAIDAAFQIHTEVGLNMYRVEINGKPVP-FSYELQNGDVVSILTGKGGKPSTDWMRYAKSRSTRSKLRSYFRARQRESLREAGHILLKDYLAMHGELLAKESYFEFDLDVPKKVEDVARFLPGKTRFETLDDLLVSIGSLHDRDKLHRIVSQLFEVPKRVL-VDAEERRRLQV-PTAIVSE---ALIKNRRRALDSANAASTTSTNASTAFPSDPSWMHLLDENIGASLNHLLSGLGLKEELADPDQLCEDCLPVYGDQIVGTCPEHAIDGDGNDMVTTVHRF--GCQHAQRAINKAQAELKG---RKVENRAVKALP 866          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|223998738|ref|XP_002289042.1| (GTP pyrophosphokinase-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976150|gb|EED94478.1| GTP pyrophosphokinase-like protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 482.256 bits (1240), Expect = 2.427e-156
Identity = 259/537 (48.23%), Postives = 356/537 (66.29%), Query Frame = 0
Query:  173 LVGRLWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAK-LGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSE---QPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKG--RGIYLCFRVMYLVQRHLSAPGYE---STVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLD-VNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRS 699
            ++   W SLLP + YL      KVK AL V+  AH  Q RKSG PFI HPVEVA +L+G+ MD +T+ AGLLHDTVEDT L  E++  +FG  V+ IVEGETKVSKL K +G S  D+ + QAENLR +F+AMT+DYR+I VKLADRLHNMRTL  M P KQ KISRETLDI+APLA R+G+   KSELED AF+Y+YP+E   ++  L  R +   + L ++     Q+LE  L ++   + + + + V GR K+ YS+W KM     E +   +L+ I D+VA+R+++     P E   + +G   G++LC+ V+ LVQ HL  PG++   + V+DY+S PKVNGYQSLH  +M  GQ VEVQIRT +MH VAE G+A+HW YKDE++R                  S+  Y T WL+ +K+WQ D V++RDFV+ VR E+LG+RV  FL+NG+I +L RGAT +DA F++H ++GL +   E+NG P+  + Y ++NGDV+ ++   +AKPS  W+R A  R+TR K+R +FRS
Sbjct:    1 MIESYWDSLLPTVSYLGTSNAAKVKQALRVAYRAHRSQMRKSGEPFIIHPVEVALLLSGMKMDAETVMAGLLHDTVEDTDLTFEQVEAMFGVEVKNIVEGETKVSKLPKIMGFS--DFADEQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPEKQKKISRETLDIFAPLAHRMGIWQFKSELEDTAFKYLYPEEYKLLNQRLLQRRDKIINTLDNS----IQVLEHTLKNDPTLRSQDVEIEVVGRTKELYSLWHKM-----EMKHDRNLNHITDLVALRVILK----PGESNGKDQGADSGVWLCYHVLGLVQ-HL--PGFQPVPTKVKDYISFPKVNGYQSLHTALMYKGQSVEVQIRTQFMHQVAEYGMASHWAYKDEKKR-----------------NSMGLYNTPWLSSIKEWQQDAVSSRDFVDCVRRELLGKRVFVFLRNGKILNLARGATAVDAAFQIHTELGLQMHGVEINGKPVP-ISYELKNGDVVSILTRDSAKPSSEWMRFAKSRSTRSKLRAHFRS 501          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|1072225329|gb|OEU10076.1| (HD-domain/PDEase-like protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 482.256 bits (1240), Expect = 3.864e-156
Identity = 258/537 (48.04%), Postives = 354/537 (65.92%), Query Frame = 0
Query:  178 WRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSE---QPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYESTVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLD-VNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGR 710
            W  LLP + YL  + V K++ AL V+  AH GQ RKSG PFI HPVEV+ +LAGL MD  T+ AGLLHDTVEDT L  E + ++FG+ V+QIVEGETKVSKL  +     +Y + QAENLR +F+AMT+DYR+I VKLADRLHNMRTL+ M P KQ+KISRETLDI+APLA R+G+   KSELED AF Y+YPQE   ++  L+     +ED L  +     QML  +L S+   + +  ++ V+GR K+ YS+W KM     ET+   +LD I DVVA+R++I     PD+ E++   RG++LC+ V+ +VQ  +      + V+DY+S PK NGYQSLH  +M NGQ +EVQIRT  MH VAE G+A+HW Y   +RR SG                   Y T WL+ +K+WQ + ++ARDFV++VR+E+LG+RV  FL+NG+I +L RGAT +DA F +H ++GL++   E+NG  + S+ Y +QNGDV+ ++ T    PS  W++ A  R+TR K+R+YFR  +     E G+
Sbjct:   13 WDLLLPAVSYLGTERVVKIRDALRVAYRAHRGQARKSGEPFIIHPVEVSLLLAGLKMDESTVMAGLLHDTVEDTDLSFELVEDMFGKPVRQIVEGETKVSKLPNIALP--EYADEQAENLRQMFVAMTDDYRIIIVKLADRLHNMRTLKHMKPEKQIKISRETLDIFAPLAHRMGIWQFKSELEDTAFMYLYPQEYKRLNRRLSLHQTKFEDTLDKS----QQMLSDRLNSDPTLRDQAASVKVSGRTKEIYSLWHKM-----ETKGERNLDQIGDVVALRVIIDPKINPDDDEND-SDRGVWLCYHVLGVVQHLVGFQPVPTRVKDYISFPKPNGYQSLHTVLMLNGQKIEVQIRTRMMHQVAECGMASHWAYTGGKRRQSGNDDI---------------YNTPWLSSIKEWQNEKLDARDFVDSVRSELLGKRVFVFLRNGKILNLARGATAIDAAFTIHTEVGLNMHGVEINGKSV-SISYELQNGDVVSIL-TGEGTPSTDWIKHAKSRSTRSKLRSYFRVKQKESLREAGK 520          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|1210519529|dbj|GAX21653.1| (GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Fistulifera solaris])

HSP 1 Score: 498.049 bits (1281), Expect = 4.126e-156
Identity = 276/612 (45.10%), Postives = 386/612 (63.07%), Query Frame = 0
Query:  174 VGRLWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKL-------------GSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLE-RKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVI---SLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYE---STVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSP-SRGPGKSVSHYRTAWLTCLKDWQLD-VNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAV------VMQNAAFLQEKLGAVPTPEDLMRSVKAHTGYASLQEMYFQV 757
            + + W  ++P + YL  ++V K+  AL+V+  AH GQ RKSG PFI HPV+VA +LAGL MD +T+ AGLLHDTVEDT +  ++I  +FG+ V+ IVEGETKVSKL K+               SP  ++E QAENLR +F+AMT DYR+I VKLADRLHNMRTL  M P KQ+KISRETLDI+APLA R+G+   KSELED AF Y+YPQE   ++ ML      Y + L  + + + + L+    L+ Q     + V GR K+ YS+W KM     ET+   +LD+I DVVA+R+VI   S   L DE ES+   RG++LC+ V+ LVQ HL  PG++   + V+DY+S PK NGYQSLH  ++ NGQ +EVQIRT +MH VAE G+A+HW Y DE+RR          SP SR P      Y T WL+ +K+WQ D +++RDFV++VR E+LG+RV  FL+NG+I +L RGAT +DA F++H ++GL++   E+NG P+    Y +QNGDV+ ++  +  KPS  W+R A  R+TR K+R YFR+ +     E G  L+         ++   ++ +  L      ED+ R +   T + +L ++   +
Sbjct:  117 IEQYWDQIMPVVNYLGTEKVAKIYHALQVAYTAHRGQMRKSGEPFIIHPVQVAILLAGLKMDGETVIAGLLHDTVEDTEMTFDQIETLFGKTVRTIVEGETKVSKLPKMVAEYSSSSEDAMMSESPTHHDE-QAENLRQMFVAMTEDYRIIIVKLADRLHNMRTLRHMKPLKQIKISRETLDIFAPLAHRMGIWQFKSELEDTAFMYLYPQEYKRLNRMLRQHQTKYRETLDKSQLVMQRRLDADSTLAHQAA--KVEVQGRTKELYSLWHKM-----ETKGVHNLDNIVDVVALRVVITPKSDADLGDENESD---RGVWLCYHVLGLVQ-HL--PGFQPVPTRVKDYISFPKPNGYQSLHTALILNGQTIEVQIRTSYMHQVAEYGMASHWAYTDEKRR----------SPSSRNPD---GLYFTPWLSSIKEWQKDRISSRDFVDSVRRELLGKRVFVFLRNGKILNLARGATAIDAAFQIHTEVGLNMYRVEINGKPVP-FSYELQNGDVVSILTGKGGKPSTDWMRYAKSRSTRSKLRAYFRARQRESLREAGHILLKDYLAMHGELIAKESYFEFDLNVPKKVEDVARFLPGKTRFETLDDLLVSI 700          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|219115159|ref|XP_002178375.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410110|gb|EEC50040.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 472.626 bits (1215), Expect = 1.222e-152
Identity = 256/540 (47.41%), Postives = 355/540 (65.74%), Query Frame = 0
Query:  182 LPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVIS-LGRLPDEPESEWKG---RGIYLCFRVMYLVQRHLSAPGY---ESTVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLD-VNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLV 713
            +P + YL  D V K+  AL V+  AH GQ RKSG PFI HPVEV+ +L+GL MD +T+ +GLLHDTVEDT L  +++  +FG  V+ IVEGETKVSKL KL  +  +Y + QAENLR +F+AMT+DYR+I VKLADRLHNMRTL +M   KQ+KISRETLDI+APLA R+G+   KSELED +F Y+YPQE   ++  L    + +++ L      L + L      +Q +   + V+GR K+ YS+W KM     ET+   +LD I DVVA+R+VIS   +  +  +SE      RG++LC+  + LVQ HL  PG+    + V+DY+S PK NGYQSLH  ++ NGQ +EVQIRT  MH VAE G+A+HW Y D++RR       GSN            Y T WL+ +K+WQ + V++RDFV++VR E+LG+RV  FL+NG+I +L RGAT +DA F++H ++GL +   E+NG P+  L Y +QNGDV+ ++ T + +P+  W+R A  R+TR K+R+YFR  +     E G+ L+
Sbjct:    1 MPTVSYLGTDAVAKIYQALCVAYRAHRGQMRKSGEPFIVHPVEVSLLLSGLKMDAETVMSGLLHDTVEDTDLTFQQVETLFGHTVRSIVEGETKVSKLPKLAFA--EYADEQAENLRQMFVAMTSDYRIIIVKLADRLHNMRTLRYMKSEKQIKISRETLDIFAPLAHRMGIWQFKSELEDTSFMYLYPQEYKRLNRRLRLHQQSFQETLEKAQDILQRQLNLDSTLQQ-QAYKVEVSGRTKEIYSLWHKM-----ETKNVQNLDHIVDVVALRVVISPRDKSVEADKSELSNDSDRGVWLCYHALGLVQ-HL--PGFVPVPTRVKDYISFPKPNGYQSLHTALILNGQTIEVQIRTSMMHQVAEYGMASHWAYTDDKRR-------GSNEEL---------YSTPWLSSIKEWQNEAVSSRDFVDSVRRELLGKRVFVFLRNGKILNLARGATAIDAAFQIHTEVGLSMHGVEINGKPVP-LSYELQNGDVVSIL-TGSGRPATDWMRYAKSRSTRSKLRSYFRDRQKESLREAGKILL 511          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|676392011|ref|XP_009039283.1| (hypothetical protein AURANDRAFT_10270, partial [Aureococcus anophagefferens] >gi|323450143|gb|EGB06026.1| hypothetical protein AURANDRAFT_10270, partial [Aureococcus anophagefferens])

HSP 1 Score: 449.129 bits (1154), Expect = 1.058e-143
Identity = 253/508 (49.80%), Postives = 328/508 (64.57%), Query Frame = 0
Query:  199 ALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPK--PLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRL-PDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYEST--VEDYVSIPKVNGYQSLHATIMRNG--QVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLDVN-ARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFR 698
            AL V+  AH GQ R+SG PFI HPV VA +L GL MD +T+ AGLLHDTVEDT + LEEI   FG  V+ IVEGETKVSKL KL       +  Q ENLR +F++MT+DYR+I VKLADRLHNMRTLE M   KQ++I+RETL+I+APLA RLG+   K+ELED AFRY +P   A + A L  R   YE  L  +  AL        L+  PK   + +SV+GR K+ YS+W KM+R          LD + DVVA+R+V+ + R    EP   W+ R  +LC+ V+ LVQ+     G E+   V+DY+S PK NGYQSLHA++ R    QVVEVQIRT WMH VAE G+AAHWLYKD    +  L   G   P+ G       Y  +WL  +KDWQ +++ +R+FVE +R E+LG+RV  FL++G+I DL RGAT+LDA F +H +IGL +  A VNG  +  L Y ++NGDV+ V  + +A+P   W+R A  R+TR K+R YFR
Sbjct:    9 ALRVAHGAHAGQMRRSGEPFIVHPVAVAGLLCGLGMDRETVAAGLLHDTVEDTAVTLEEIEATFGADVRAIVEGETKVSKLPKLA------KREQLENLRQMFISMTDDYRIIIVKLADRLHNMRTLEHMPRHKQLRIARETLEIFAPLAHRLGLWTFKAELEDWAFRYAHPGPYAALEAALEVRRSRYESALKGSRKALEAR-----LAADPKLRGVKVSVSGRTKELYSLWLKMER--------ADLDGVPDVVALRVVLEVPRDGAAEPLEAWRERSTWLCYHVLGLVQQ---LKGCEAVPRVKDYISFPKPNGYQSLHASLRREAEDQVVEVQIRTAWMHEVAEHGMAAHWLYKDGLFSVEDLDDDG--EPADGRRGVAKPYAVSWLNSVKDWQHEIHSSREFVETIRKEVLGKRVFVFLRDGQILDLSRGATVLDAAFHIHTEIGLKVATAYVNGQEV-QLSYELKNGDVVSVSTSEDARPQLDWLRMAQRRSTRAKLRAYFR 491          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|397569561|gb|EJK46819.1| (hypothetical protein THAOC_34498 [Thalassiosira oceanica])

HSP 1 Score: 444.891 bits (1143), Expect = 5.618e-136
Identity = 237/484 (48.97%), Postives = 320/484 (66.12%), Query Frame = 0
Query:  178 WRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVIS-LGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYE---STVEDYVSIPKVNGYQSLHATIMRNGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLD-VNARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASL 656
            W  LLP + YL  +   K+K AL V+  AH  Q RKSG P+I HPVEVA +L+G+ MD DT+ AGLLHDTVEDT L  E+I  +FG  V+ IVEGETKVSKL KL  +  DY + QAENLR +F+AMT+DYR+I VKLADRLHNMRTL  M PAKQ KISRETLDI+APLA R+G+   KSELED AF Y+YP E   ++  L  R + +E+ L +T  AL + L+    + Q + + + V GR K+ YS+W KM     E +   +LD I D+VA+R++++  G+     + +    G +LC+ V+ LVQ HL  PG++   + V+DY+S PK NGYQSLH  +M +GQ +EVQIRT +MH VAE G+A+H+ YKDE +R                 +S   Y T WL+ +K+WQ D V +RDFV+++R E+LGRRV  FL+NG+I +L +GAT +DA F +H ++GL +   E+NG P + L
Sbjct:  262 WDQLLPTVSYLGTENAAKIKKALRVAYCAHRPQKRKSGEPYIIHPVEVALLLSGMKMDADTVMAGLLHDTVEDTDLTFEQIEAMFGTEVKNIVEGETKVSKLPKLAFA--DYADEQAENLRQMFIAMTDDYRIIIVKLADRLHNMRTLRHMKPAKQQKISRETLDIFAPLAHRMGLWPFKSELEDTAFMYLYPDEYTRLNQRLRLRQKKFEETLTNTVNALEKTLQSD-PTIQSQDVEIEVVGRTKELYSLWHKM-----EMKHDRNLDHITDLVALRVILTPRGKSKGGADGDPADSGTWLCYHVLGLVQ-HL--PGFQPMPTKVKDYISFPKPNGYQSLHTALMYSGQSIEVQIRTAYMHQVAEYGMASHFAYKDEMKR----------------KESNELYNTPWLSSIKEWQQDKVCSRDFVDSIREELLGRRVFVFLRNGKILNLSKGATAVDAAFSIHTEVGLGMHGVEINGKPNSYL 718          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|654411577|ref|WP_027883090.1| (bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Meiothermus rufus])

HSP 1 Score: 433.335 bits (1113), Expect = 1.385e-134
Identity = 276/706 (39.09%), Postives = 388/706 (54.96%), Query Frame = 0
Query:  177 LWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVD---YEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLERKLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYESTVEDYVSIPKVNGYQSLHATIMR-NGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLDV-NARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAVVMQNAAFLQEKLGAVPTPEDLMRSVKAH--TGYASLQEMYFQVALSVDYHETGAMLGRVLGLDAESAHALDLAPLMAASEGERSELLHRSRARGEQEPLFLLSLNGRETFRLCPVCRPVDGDPLTGMRVWEEPHGEVTVVHRADKACPQLQAAEESTLGAV 875
            LWRSL P LGYL      +V+ AL  +  AH GQ RKSG P+I HPV VARILA L +D +T+ AGLLHDT+EDT +R EE+ E FG  V++IVEGETKVSKL KL  +  +    EE  AE+LR +F+AM  D R+I VKLADRLHN+RTLEFM P KQ +I+RETL+IYAPLA RLG+  +K ELED++F Y+ P+   ++ A L +     E  +      L Q L+R  +  Q       VTGR K  YSIW+KM R+ +      +L+ I D++A+R+++   +  D  E+  +G+ +  C+ V+ LV  H         V+DY+++PK NGYQSLH T++  NG  +EVQIRT  MH VAE G+AAHWLYK+           G   P           R  WL  +++WQ +  ++RDFVEAV  E+LG RV  F   G+I +LP+GA+ +D  + +H ++G H+  A+VNG  +  L Y +QNGD++ ++  + A PS  W+  A  R+ + KIR +FR+ E     E+G+R++             K   +P P +      AH     AS +++Y  +A       T   + R+L   +E+        L    +  RSEL  R            L  N +   +L   C P  GD L G        G    +H+AD  CP ++   E   G V
Sbjct:    4 LWRSLEPHLGYLPVQAKDQVRAALVFAYRAHEGQKRKSGEPYITHPVAVARILAELGLDAETLMAGLLHDTIEDTEVRPEELEERFGPAVRKIVEGETKVSKLYKLAHAAAEDKPAEERHAEDLRQMFIAMAEDVRIIVVKLADRLHNLRTLEFMPPEKQRRIARETLEIYAPLAHRLGIGQVKLELEDLSFCYLEPERYQDLEARLKSHRAEREAAVQDAREKLIQALQRDFILRQ-SIQRFEVTGRTKHLYSIWKKMQREGK------ALEQIYDLLALRVILEPRQGSDPEENALRGKQV--CYHVLGLV--HAIWQPIPGRVKDYIAVPKPNGYQSLHTTVISVNGLPLEVQIRTKEMHQVAEFGIAAHWLYKE-----------GVTDPEE------LKRRVGWLKNIQEWQQEYSSSRDFVEAVTRELLGGRVFVFTPKGKIINLPKGASPVDFAYHIHTEVGHHMVGAKVNGR-IVPLSYELQNGDIVEILTAKTAHPSKDWMEYAKTRSAKQKIRMFFRAFERAETLEKGQRMLEKYF---------KRRGLPRPLESQLEEAAHRLVKSASPEDLYVAIAAG---RVTPQQVARLLAPKSET--------LPPRPKPVRSELGIR------------LESNLQAPLKLASCCSPAKGDALLGYVT----RGRGVTMHKAD--CPNMRRLMEQDPGRV 642          
BLAST of EWM27646.1 vs. NCBI_GenBank
Match: gi|752804989|ref|WP_041444415.1| (bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus thermophilus])

HSP 1 Score: 428.713 bits (1101), Expect = 8.451e-133
Identity = 270/694 (38.90%), Postives = 387/694 (55.76%), Query Frame = 0
Query:  177 LWRSLLPGLGYLSRDEVGKVKLALEVSALAHLGQNRKSGAPFIEHPVEVARILAGLSMDVDTICAGLLHDTVEDTHLRLEEIGEIFGEGVQQIVEGETKVSKLAKLGSSPVDYEETQAENLRSLFLAMTNDYRVIFVKLADRLHNMRTLEFMSPAKQMKISRETLDIYAPLADRLGVRGLKSELEDIAFRYVYPQESAEISAMLANRSEGYEDVLASTHIALHQMLER-KLLSEQPKPLNLSVTGRLKDRYSIWRKMDRKAQETRQPVSLDDIKDVVAMRIVISLGRLPDEPESEWKGRGIYLCFRVMYLVQRHLSAPGYESTVEDYVSIPKVNGYQSLHATIMR-NGQVVEVQIRTDWMHAVAEMGLAAHWLYKDEQRRISGLSTAGSNSPSRGPGKSVSHYRTAWLTCLKDWQLDV-NARDFVEAVRAEILGRRVSFFLKNGRIHDLPRGATLLDAGFKLHKQIGLHLRLAEVNGFPLASLDYVVQNGDVLYVVATRNAKPSPSWVREAHCRTTRGKIRTYFRSVEPGVAEEEGRRLVAAVVMQNAAFLQEKLGAVPTPEDLMRSVKAHTGYASLQEMYFQVALSVDYHETGAMLGRVLGLDAESAHALDLAPLMAASEGERSELL--HRSRARGEQEPLFLLSLNGRETFRLCPVCRPVDGDPLTGMRVWEEPHGEVTVVHRADKACPQLQ 865
            LW  L P L YL+ +E  KV+ A   +  AH GQ R+SG P+I HPV VA ILAGL MD DT+ AGLLHDT+ED  +  EE+   FG  V++IVEGETKVSKL KL +  ++ EE +AE+LR +F+AM  D R+I VKLADRLHN+RTLE M P KQ +I++ETL+IYAPLA RLG+  LK ELED++FRY++P+  A +SA +    E  E ++      L + L R +LL  Q +     VTGR K  YSIW+KM+R+ +      +L+ I D++A+R+++     P       + + +  C+ V+ LV  H         V+DY+++PK NGYQSLH T++   G  +EVQIRT  MH VAE G+AAHWLYK+           G   P           R +WL  +++WQ +  ++R+FVEAV  ++LG RV  F   GRI +LP+GAT +D  + +H ++G H+  A+VNG  +  L Y +QNG+++ ++ ++NA PS  W+  A  R+ + KIR YFR+ E     E+G+ L+         +L+ +    PT   L  + K  +   S +E+Y  +AL+                         L P   A +     LL   + + +   E    L  + +   RL   C P+ GDP+ G        G    VHRAD  CP L+
Sbjct:    8 LWNRLEPALAYLTPEERAKVQEAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAPEELERRFGPTVRRIVEGETKVSKLYKLAN--LEGEERRAEDLRQMFIAMAEDVRIIIVKLADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFASLSARIQATQEARERLIQKAIHLLQETLTRDELLQSQLQ--GFEVTGRPKHLYSIWKKMEREGK------TLEQIYDLLAVRVILDPKPAPTRESQALREKQV--CYHVLGLV--HALWQPIPGRVKDYIAVPKPNGYQSLHTTVIALEGLPLEVQIRTREMHRVAEYGIAAHWLYKE-----------GLTDPEE------VKRRVSWLKSIQEWQKEFSSSREFVEAVTKDLLGGRVFVFTPKGRIINLPKGATPVDFAYHIHTEVGHHMVGAKVNGR-IVPLSYELQNGEIVEILTSKNAHPSKGWLEFAKTRSAKSKIRQYFRAQERQETLEKGQHLL-------ERYLKRRGLPKPTDSQLEEAAKRLSLPPSPEELYLALALN------------------------RLTPRQVAEKLYPKALLRPEKPKPQARNEWGIRLEQDLQAPIRLASCCEPMKGDPILGFVT----RGRGVTVHRAD--CPNLR 632          
The following BLAST results are available for this feature:
BLAST of EWM27646.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109916|gb|EWM27646.1|0.000e+0100.00ppgpp synthetase [Nannochloropsis gaditana][more]
gi|1210526390|dbj|GAX14878.1|5.647e-15936.76GTP diphosphokinase / guanosine-3',5'-bis(diphosph... [more]
gi|223998738|ref|XP_002289042.1|2.427e-15648.23GTP pyrophosphokinase-like protein, partial [Thala... [more]
gi|1072225329|gb|OEU10076.1|3.864e-15648.04HD-domain/PDEase-like protein, partial [Fragilario... [more]
gi|1210519529|dbj|GAX21653.1|4.126e-15645.10GTP diphosphokinase / guanosine-3',5'-bis(diphosph... [more]
gi|219115159|ref|XP_002178375.1|1.222e-15247.41predicted protein, partial [Phaeodactylum tricornu... [more]
gi|676392011|ref|XP_009039283.1|1.058e-14349.80hypothetical protein AURANDRAFT_10270, partial [Au... [more]
gi|397569561|gb|EJK46819.1|5.618e-13648.97hypothetical protein THAOC_34498 [Thalassiosira oc... [more]
gi|654411577|ref|WP_027883090.1|1.385e-13439.09bifunctional (p)ppGpp synthetase/guanosine-3',5'-b... [more]
gi|752804989|ref|WP_041444415.1|8.451e-13338.90bifunctional (p)ppGpp synthetase/guanosine-3',5'-b... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3039rna3039Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications