EWM27664.1, cds3008 (CDS) Nannochloropsis gaditana

Overview
NameEWM27664.1
Unique Namecds3008
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:489763..490827 -
Alignment locationCM002460.1:486493..489639 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27664.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100125g7.427.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:489763..490827 -
CM002460.1supercontigCM002460.1:486493..489639 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence
Homology
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585109935|gb|EWM27664.1| (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana])

HSP 1 Score: 2877.43 bits (7458), Expect = 0.000e+0
Identity = 1403/1403 (100.00%), Postives = 1403/1403 (100.00%), Query Frame = 0
Query:    1 MWRRRASTSDTVSKAGSPSDDGGPKHDDITRQAMSPASLNRYLCQRGLSGTQNRKMALLKGLMPMVASTFLVFILLYCRRANPATLSPAQGQQQKASPSIFRTLQSLSMYPNLFFWNMKQAAEEVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGGRKCEVTTEESTGSFNYREKGYGLCFKGFDGSERSDPEGSVALGIDDGNVVPTLVVEKLHAHQQLGGWHGLTPLYTPPQVMYVGSNITSCALCGLENVEVRGPGMEGCPAGTEEACPAESPVSSGRTSALMEPATAAADVASGSSATPFKKARKFFGLGSRLRKLITGEKEDDPIRSTGTDEIKSSHHYDPDALLPDSYVVIADLMLECQTDGVEAGCGILLETLQEIVESSWLKGLEDEARVHVAKFKSSDSLREMLGIPSMDGVAAPSSTDTNIPQSKRSSSGNLSEPSCNGHEAFVAYAHTSDKSTYESLKASLSSATESATIGSGSGSTLSADLALLLSSQQPTICTVNFTLQDSFMVPAPLAKFSSTSTGSSSSATASNRAKTAFQGLTLPRVWINITSPVITPRKTYDIVISEFDDKDIVGLQLMAKPSKDKKKSLFFSSTPRLLHTFQPFDSDKHNQTWAWRVSPLVFQGMASGPYFLKAFDVLEPKRFVLSQAFQVERSAAEPRQGAGKGAASSLFPMKAERILHRLDPQNSPTDAHLREDPEPKTDRETPVLESDSRQNHRPRQLLDEDSSDRDLLSMMATLLALPEDTSLMDELWKALLAFPASQTALADEGLARKLLERAPVLQTAPSVVALDADDGAGWRDPGQVQAALGKAIADFVDLSVSVLRQQRGRGDGPKGMGKADVFDGREDPNDHWPARILGGLTPEEEALAARVGRDGDLEAMGELMDTQAAHRFGGMTMARLKAMELGDEFKGGLASEIFRDLIDDPEIWQELEA 1403
            MWRRRASTSDTVSKAGSPSDDGGPKHDDITRQAMSPASLNRYLCQRGLSGTQNRKMALLKGLMPMVASTFLVFILLYCRRANPATLSPAQGQQQKASPSIFRTLQSLSMYPNLFFWNMKQAAEEVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGGRKCEVTTEESTGSFNYREKGYGLCFKGFDGSERSDPEGSVALGIDDGNVVPTLVVEKLHAHQQLGGWHGLTPLYTPPQVMYVGSNITSCALCGLENVEVRGPGMEGCPAGTEEACPAESPVSSGRTSALMEPATAAADVASGSSATPFKKARKFFGLGSRLRKLITGEKEDDPIRSTGTDEIKSSHHYDPDALLPDSYVVIADLMLECQTDGVEAGCGILLETLQEIVESSWLKGLEDEARVHVAKFKSSDSLREMLGIPSMDGVAAPSSTDTNIPQSKRSSSGNLSEPSCNGHEAFVAYAHTSDKSTYESLKASLSSATESATIGSGSGSTLSADLALLLSSQQPTICTVNFTLQDSFMVPAPLAKFSSTSTGSSSSATASNRAKTAFQGLTLPRVWINITSPVITPRKTYDIVISEFDDKDIVGLQLMAKPSKDKKKSLFFSSTPRLLHTFQPFDSDKHNQTWAWRVSPLVFQGMASGPYFLKAFDVLEPKRFVLSQAFQVERSAAEPRQGAGKGAASSLFPMKAERILHRLDPQNSPTDAHLREDPEPKTDRETPVLESDSRQNHRPRQLLDEDSSDRDLLSMMATLLALPEDTSLMDELWKALLAFPASQTALADEGLARKLLERAPVLQTAPSVVALDADDGAGWRDPGQVQAALGKAIADFVDLSVSVLRQQRGRGDGPKGMGKADVFDGREDPNDHWPARILGGLTPEEEALAARVGRDGDLEAMGELMDTQAAHRFGGMTMARLKAMELGDEFKGGLASEIFRDLIDDPEIWQELEA
Sbjct:    1 MWRRRASTSDTVSKAGSPSDDGGPKHDDITRQAMSPASLNRYLCQRGLSGTQNRKMALLKGLMPMVASTFLVFILLYCRRANPATLSPAQGQQQKASPSIFRTLQSLSMYPNLFFWNMKQAAEEVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGGRKCEVTTEESTGSFNYREKGYGLCFKGFDGSERSDPEGSVALGIDDGNVVPTLVVEKLHAHQQLGGWHGLTPLYTPPQVMYVGSNITSCALCGLENVEVRGPGMEGCPAGTEEACPAESPVSSGRTSALMEPATAAADVASGSSATPFKKARKFFGLGSRLRKLITGEKEDDPIRSTGTDEIKSSHHYDPDALLPDSYVVIADLMLECQTDGVEAGCGILLETLQEIVESSWLKGLEDEARVHVAKFKSSDSLREMLGIPSMDGVAAPSSTDTNIPQSKRSSSGNLSEPSCNGHEAFVAYAHTSDKSTYESLKASLSSATESATIGSGSGSTLSADLALLLSSQQPTICTVNFTLQDSFMVPAPLAKFSSTSTGSSSSATASNRAKTAFQGLTLPRVWINITSPVITPRKTYDIVISEFDDKDIVGLQLMAKPSKDKKKSLFFSSTPRLLHTFQPFDSDKHNQTWAWRVSPLVFQGMASGPYFLKAFDVLEPKRFVLSQAFQVERSAAEPRQGAGKGAASSLFPMKAERILHRLDPQNSPTDAHLREDPEPKTDRETPVLESDSRQNHRPRQLLDEDSSDRDLLSMMATLLALPEDTSLMDELWKALLAFPASQTALADEGLARKLLERAPVLQTAPSVVALDADDGAGWRDPGQVQAALGKAIADFVDLSVSVLRQQRGRGDGPKGMGKADVFDGREDPNDHWPARILGGLTPEEEALAARVGRDGDLEAMGELMDTQAAHRFGGMTMARLKAMELGDEFKGGLASEIFRDLIDDPEIWQELEA 1403          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585108908|gb|EWM26817.1| (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 176.407 bits (446), Expect = 7.787e-41
Identity = 126/461 (27.33%), Postives = 202/461 (43.82%), Query Frame = 0
Query:  164 DDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRF-GGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEF-----IFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGG 618
            D +W  +   +G  C      +L   V + +C V+ L  G  Y LD  +HV +   +IG P   PVI+A    RAF V +    D+R +  + G    + +E+     GG  ++  G       CL  +       +  A +      ++GG +L+E G + +  C      PG +      +GG +L++SG   +T        +F    G G  +++LGG+  +T  +   N  F     +G  +F+GGG  + T       + FLSF+GAGF +  G G+ + TG     N   +  AG G+   +G G+ +  G   A  +   +    GV  F GAG +    CV+   + +A +   GG++YLG G A    C  A    + + A  GGD  + AG + +V   F     I V+ GQG +  V AG A +  V ++    I       F+F V G
Sbjct:  176 DASWGDYIAVHG--CTPDTGVQLRSLVETGSCPVITLTPGVRYVLDEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVGDVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLFVTVVGVGNFISILGGNAVITGSSFLLNAAFGVSQGIGMLVFVGGGSSILTGCVTQGNVGFLSFFGAGFGLWTGGGVSVLTGMVFNSNLCMSASAGAGLNNALGGGVMVKTGVVQAATVTHNMVAFLGVATFVGAGTVVYTDCVWTRISTMAVFFGGGGSLYLGAGVATLTNCVSAAVTCIVYVAAAGGDHAVMAGWLTMVNNYFFKYVIIAVYHGQGVDTCVTAGGALLVRVGYTGTPAIVATNPNLFNFYVAG 634          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585107242|gb|EWM25479.1| (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana])

HSP 1 Score: 163.31 bits (412), Expect = 4.430e-37
Identity = 138/495 (27.88%), Postives = 230/495 (46.46%), Query Frame = 0
Query:  172 LRNGKTCLAHDTRRLME-AVNSTACDVVVLVAGHVYNL-----DRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFT-IQPVRESFINSAPEF-----IFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFVKNVNFSANAGIHYLREGTFSFVVGG-------RKCEVTTEESTGSFNYREKGYGLCFKGFD 647
            L +G  C+      L + A + + C ++ L+ G +YN+     D  + +     +IGNP   P I+ A+++R F + +G   D++ +  Y G G+LI   I    GG   + +G R  AF  +FT   PV    I  AP+      +FGG + + GG++T+    F+ + PG +      +G  +L+++G A L+ V F  +Q+F    G G  + VLGG L  + CT T N +       G  +FLGGGVG+F+  A    +A  S +G G  + +G G+ + +G A + +   A   G GV   +G G     G     + G+  +   GV  + GAG   +VG        +A    +GG + +G G  V VG A   + G+     +GG+ +LGAG ++ +      N G+      G + FV AG+  V+    + N G+ Y+      + V G       +  ++  + +  +   R+K     FK FD
Sbjct:  146 LISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIAT-IPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQLFINGFGVGFLVAVLGGVLVSSGCTFTINFLAINASGAGILVFLGGGVGIFSGCAWVANLAVFSHFGTGLELFVGGGVIVISGGAFSASLGVAIECGTGVMVSLGGGTLTMTGVTQQLSAGVDFYAGAGVLNWVGAGSAVIVGFSQSRNVGVAGVYGIGGTMAVGAGVLVVVGAANVDNYGVASVVLIGGNYFLGAGILIDIGSPMAKNVGVLFAFFLGFDAFVGAGAIVVRGSPSAVNTGVAYIAPPVSQYFVNGQAVPASFKNFKLVGKGNATAIVPRDKADKELFKSFD 639          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|553183773|ref|XP_005853964.1| (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >gi|422295099|gb|EKU22398.1| hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 142.124 bits (357), Expect = 2.400e-30
Identity = 154/537 (28.68%), Postives = 239/537 (44.51%), Query Frame = 0
Query:   91 GQQQKASPSIFRTLQSLSMYPNLFFWNMKQAAE-EVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGH--VYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDL-------------IRNEIRTRFGGAIYMSIG---------TRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFF--AVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACT-------HTAN----LVFAGQG---LVGR---------------NIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTG-SAITLNAAFAQ-------LAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVL 563
            GQ+ KA+ +    + SL    ++  W   +A+E E +     TF  A A   +     DPL     + ADV + D     F  +N  +C   D   L++AV +  C++VVL +G    Y LD  + V +   V+GNPA  P I+A +AERAF V  G   +++ +   +G G +             +  E+R   GG + +  G         T +   +   ++Q   E  I+     I+GG + +  G +   GC+F+   ++  F + VS  +GG VL+++G A  T   F  T +F    G G ++ VLGG+   T C         +AN    ++F G G   L G                + F+GGGV +FT + + +T   L+ +GAGF + +G G+ + TG + +  N    Q         G GV+  VG   A FYGT         ++   G F + GAG    +G       A  ++  LGG      G  VY+GC       L +FAGLG  +YLGAG  V+
Sbjct:   36 GQKDKAAVASEPNVASLDT--DVDTWTPPKASEPEESASTGQTFTNANANALTGAIKGDPLQAIATMGADVNLKD-----FVGQN--SCWPADGAELLDAVENQGCELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVR---GGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLPFTDQVS--IGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFNVAVLGGNAVFTFCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAPILFFSGIGDFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVETGVTYVQFNCPAHQGLTGASIFTGAGVSIHVGV-PASFYGTT-------VLFTGQGGFSYNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAALVYFAGLGAVMYLGAGGAVI 550          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585104563|gb|EWM23493.1| (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana])

HSP 1 Score: 138.272 bits (347), Expect = 4.220e-29
Identity = 113/436 (25.92%), Postives = 191/436 (43.81%), Query Frame = 0
Query:  178 CLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLI-------------RNEIRTRFGGAIYMSIGTRLFAFDCLFTI----------QPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGS 590
            C  +D   L +A+ + +C +V L  G +Y L+R + V +   V+GNP+  P+I+  +A R+F V  G   D+R +  +  DG +              RN +    GG++++  G     F  +  I          + +R S I+     I+GG + + GG +  VGC F+ +   +       +G  VL L G  T T   F    +F    G G+ +    G    T  T   N     +  +G+   +GGGV + T   + +  A LS+ G+G   ++G G+ + TG       A   + GVG  + VG+G+A+F GT F +  G+  + + G   F G+G +   G       A AS    GG  ++G G A + GC     + +     LG  + + AG +  +   F     I      G+ +++ AG+
Sbjct:  155 CEVNDGLELTDAIENQSCSIVYLKPGQLYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRS-IDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQLGGVLTFTGCTFFENTVFGIENGVGLFVAQFAGLSTYTFNTFIENNFAISENCLGQAFLVGGGVMIMTHSVINEYSAGLSYSGSGELNVLG-GVLVVTGMNNVEAFALGAVYGVGFEYTVGSGVAIFTGTVFDEYNGLLFFSALGEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGA 588          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585102763|gb|EWM22289.1| (Pectin lyase fold/virulence factor [Nannochloropsis gaditana])

HSP 1 Score: 138.272 bits (347), Expect = 4.328e-29
Identity = 119/456 (26.10%), Postives = 194/456 (42.54%), Query Frame = 0
Query:  178 CLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGG-AIYMSIGTRLFAFDCLFTIQPVRES-FINSAPEF----IFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSA-FVKNVNFSANAGIHYLREGTFSFVVGGRKCEVTTE 626
            C   +   L   ++ T C  + LV    Y++   + + +  T++G P   P+I+A    RAFLV +G   DVR +   +G    +   +  R  G   Y+  G       C F+      + F+   P      +FGG I+ E G + +  C  F    G        +GG  L+L G   LT   F+   IFA + G G ++  LGG++ +T C       F     +G   FLGGG  + T   VT T+ F +++G G  I  GSG+ + TG     N       G+G    VGAG+++  G        +      G+  + GAG       +     A+ ++   G  +YLG G A  V      + G+     +GGD+ +  G +  +  V+ S + I+   GQG +LF+  G A  V N+  +    + +   G  +  V G    ++T+
Sbjct:    9 CTPKNAEELRYMIDHTTCPRLTLVPATNYSITEQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKGKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIFASSLGAGGYVANLGGTVVITGCLFNYAGTFVCTMGLGYLFFLGGGATILTGCIVTTTIGFAAYFGGGIGIFTGSGVAVMTGFIYAANGIMGIGTGLGFQIAVGAGVSIRTGVIQTTMSALGYVTGCGITNYIGAGIAVFSDVILARSTALLTFFGTGSYLYLGAGSATIVNAVGFFNTGIGANGFVGGDMAVFGGYMSRINQVYISTSAISFAAGQGADLFIGLGGASLVLNLYITPATPVAFRSRGLVAIYVAGNNVFLSTQ 464          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585105443|gb|EWM24109.1| (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana])

HSP 1 Score: 133.65 bits (335), Expect = 3.716e-28
Identity = 147/513 (28.65%), Postives = 226/513 (44.05%), Query Frame = 0
Query:  116 WNMKQAAE-EVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGH--VYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDL-------------IRNEIRTRFGGAIYMSIG---------TRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFF---AVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACT-------HTAN----LVFAGQG---LVGR---------------NIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTG-SAITLNAAFAQ-------LAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVL 563
            W   +A+E E +     TF  A A   +     DPL     + ADV + D   +        +C   D   L++AV +  C++VVL +G    Y LD  + V +   V+GNPA  P I+A +AERAF V  G   +++ +   +G G +             +  E+R   GG + +  G         T +   +   ++Q   E  I+     I+GG + +  G +   GC+F+    ++P F + VS  +GG VL+++G A  T   F  T +F    G G ++ VLGG+   T C         +AN    ++F G G   L G                + F+GGGV +FT + + +T   L+ +GAGF + +G G+ + TG + +  N    Q         G GV+  VG   A FYGT         ++   G F + GAG    +G       A  ++  LGG      G  VY+GC       L +FAGLG  +YLGAG  V+
Sbjct:   78 WTPPKASEPEESASTGQTFTNANANALTGAIKGDPLQAIATMGADVNLKDFVGQ-------NSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDEDIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEGSGSSSVVGEVR---GGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP-FTDQVS--IGGDVLVVAGNAFFTGCTFTATLLFGNFGGAGFNVAVLGGNAVFTFCVIQAQGVAQSANGAGQILFVGGGTMILTGLDFRFAAPILFFSGIGDFFVGGGVMIFTGVTIENTYPILAAYGAGFYLAVGGGVMVETGVTYVQFNCPAHQGLTGASIFTGAGVSIHVGV-PASFYGTT-------VLFTGQGGFSYNGAGYSLWLGSPIAIFLATFAFFGLGGLTSQPAGFMVYLGCPAFLPAALVYFAGLGAVMYLGAGGAVI 569          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585108528|gb|EWM26475.1| (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana])

HSP 1 Score: 134.42 bits (337), Expect = 6.671e-28
Identity = 118/446 (26.46%), Postives = 196/446 (43.95%), Query Frame = 0
Query:  177 TCLAHDTRRLMEAVNSTACDVVVL-----VAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDG-----------DLIRNEIRTRFGGAIYMSIGTRL-----FAFDCLFTIQPVRESFINSAPEF----IFGGDILMEGGVMTLVGCSFF--AVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAF--GVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSAFV 593
            TC   +   L  AV    C +VVL     +A  + +++ +M V +   V+G+PA  P I+A    RAF +  G   +++++   +G G           D I +++    GG++ +  G          F  + T Q + E  I    +     I+GG + +  G +    C F+   ++  F + V+  +G  +L+L+G   +T   F  T +F+   G G ++  LGG+  MT CT     +     + G  +F GGG  + T +      A ++F G G     G+G G+   + +T+   FA ++  G +    VGAG+ +  G  F +  G      TG+  F G G  + VG       +  +    GG  Y G G +V+VGC  A    +  F G GG    GAG ++ V         ++ F G G  +FV AGSA +
Sbjct:  203 TCWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIM-VMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVA--IGADILVLAGNVFVTGCTFTNTMLFSNYGGAGWNIVTLGGNTVMTWCTIQWQAIIMSMFVAGMVVFTGGGTLIMTGVDFRFVSAGMNFAGFG---SFGTGAGVMVNTGVTMEQVFAVMSSFGASMYNAVGAGVLIESGATFVQFTGPVYMAMTGMMDFLGTGASSHVGVPCSMSGSTGAMHGQGGFSYNGAGSSVWVGCPVAMFWAVYSFLGTGGVAAQGAGIMIWVGNPVFMPMAVSYFAGLGAIMFVGAGSAVI 642          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|585105346|gb|EWM24054.1| (hypothetical protein Naga_100063g15 [Nannochloropsis gaditana])

HSP 1 Score: 134.035 bits (336), Expect = 7.974e-28
Identity = 134/486 (27.57%), Postives = 213/486 (43.83%), Query Frame = 0
Query:  171 WLRNGK----TCLAHDTRRLMEAVNSTA--CDVVVLVA--GHVYNLDRMMHVYKPTTVIGNPADRPVINAAEA-ERAFLVHSGATFDVRHILFYEGDGDLI---RNEIRTRFGGAIYMSIGTRLFAFDCLFTIQ-PVRESFINSAP----------EFIFGGDILMEGGVMTLVGCSFFAVVP---GFINSVSTELGGAVLILSGAATLTLVNFMTTQIFA-YNAGGGMHLTVLGGSLAMT--ACTHTA--NLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVA--FGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGC----VFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGSA-FVKNVNFSANAGIHYLREGTFSFVVGG 618
            WL+  +     C   +   +++ +N T   C V+VL     + Y + R ++V  P  ++GNP   P++N ++  ER F +  G   D R ++   G G  I   R++ R   G  + +  G    A   LF  +     SFI               F  G  + + GG + L GC    V P   G++ + S  LG  VL+++G A  T V  +   +FA Y    G H+ VLGG++ M   A  HT+   L F     +G ++ + GGV V    +    +A L     G  + +G+G    TG  +T   ++   AG G    F VGAG   F G A+   +  A+W   G     GAG +  +G      +G  N       LGG  Y G G   ++      S    + +G+G D ++GAG +  ++ V  S   +  F G GTE++V AG A F+++  +S    + Y     + + VGG
Sbjct:  144 WLQANQGTAAVCYPKNGYEVVKMINGTESPCRVIVLTKPFTYGYKIQRQINVSMPKVIVGNPLSMPMVNCSKKIERCFEILPGGKLDARFLIMVRGGGKYIAADRSQ-RLNMGTHVRVQAGGDFTATGVLFRERNNTMRSFIMEVENTLRLQSRYLNFNLGQYLTVIGGNLFLQGCFLLRVRPYGTGYLTTFS--LGREVLVIAGNAVFTGVYNIGHYLFASYPWMSGKHVCVLGGTMTMIGGASVHTSGPQLHFG----IGIDLAVMGGVMVTIGFSYGAAIAAL-LRVCGGQLTVGAGTAYHTG--LTYARSYIVFAGFGAGQTFVVGAGNMQFIGGAYGSFINNAIWAGVGGNTMVGAGSLTWIGVPQARFYGTNNIYG----LGGIYYNGAGSTTFIYLPQYSSYIAYYMSGIGTDTFIGAGWLTSIQNVRASFAVVYSFSGLGTEMYVGAGGAIFIRSYTYSKR--LKYWTTWPYKYTVGG 613          
BLAST of EWM27664.1 vs. NCBI_GenBank
Match: gi|553185366|ref|XP_005854242.1| (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >gi|422294822|gb|EKU22122.1| hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 122.094 bits (305), Expect = 3.103e-24
Identity = 110/436 (25.23%), Postives = 185/436 (42.43%), Query Frame = 0
Query:  178 CLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLI-------------RNEIRTRFGGAIYMSIGTRLFAFDCLFTI----------QPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHLTVLGGSLAMTACTHTANLVFAGQGLVGRNIFLGGGVGVFTSIAVTDTMAFLSFWGAGFSIMIGSGLGIFTGSAITLNAAFAQLAGVGVAFGVGAGMALFYGTAFAKNLGIAVWHSTGVFIFCGAGRIALVGCVFGHQNAIASWQLLGGAVYLGTGQAVYVGCAWARSLGLDFFAGLGGDLYLGAGQIVLVEGVFTSNTGITVFLGQGTELFVAAGS 590
            C  +D   L +A+            G +Y L+R + V +   V+GNP+  P+I+  +A R+F V  G   D+R +  +  DG +              RN +    GG++++  G     F  +  I          + +R S I+     I+GG + + GG +  VGC F+ +   +       +G  VL L G  T T   F    +F    G G+ +    G    T  T   N     +  +G+   +GGGV + T   + +  A LS+ G+G   ++G G+ + TG       A   + GVG  + VG+G+A+F GT F +  G+  + + G   F G+G +   G       A AS    GG  ++G G A + GC     + +     LG  + + AG +  +   F     I      G+ +++ AG+
Sbjct:   50 CEVNDGLELTDAIE----------VGQLYELEREILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRS-IDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVLQLGGVLTFTGCTFFENTVFGIENGVGLFVAQFAGLSTYTFNTFIENNFAISENCLGQAFLVGGGVMIMTHSVINEYSAGLSYSGSGELNVLG-GVLVVTGMNNVEAFALGAVYGVGFEYTVGSGVAIFTGTVFDEYNGLLFFSALGEVNFIGSGVMIATGSPAMEYIAQASENGQGGNTFIGAGYASFTGCVVLEFISIANIFMLGEYIAVDAGFLTWIASPFIEAAAIEYAFQLGSIVYIGAGA 473          
The following BLAST results are available for this feature:
BLAST of EWM27664.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109935|gb|EWM27664.1|0.000e+0100.00hypothetical protein Naga_100125g7 [Nannochloropsi... [more]
gi|585108908|gb|EWM26817.1|7.787e-4127.33Pectin lyase fold/virulence factor [Nannochloropsi... [more]
gi|585107242|gb|EWM25479.1|4.430e-3727.88hypothetical protein Naga_100207g1 [Nannochloropsi... [more]
gi|553183773|ref|XP_005853964.1|2.400e-3028.68hypothetical protein NGA_0462000 [Nannochloropsis ... [more]
gi|585104563|gb|EWM23493.1|4.220e-2925.92hypothetical protein Naga_100198g12 [Nannochlorops... [more]
gi|585102763|gb|EWM22289.1|4.328e-2926.10Pectin lyase fold/virulence factor [Nannochloropsi... [more]
gi|585105443|gb|EWM24109.1|3.716e-2828.65hypothetical protein Naga_100286g5 [Nannochloropsi... [more]
gi|585108528|gb|EWM26475.1|6.671e-2826.46hypothetical protein Naga_100045g21 [Nannochlorops... [more]
gi|585105346|gb|EWM24054.1|7.974e-2827.57hypothetical protein Naga_100063g15 [Nannochlorops... [more]
gi|553185366|ref|XP_005854242.1|3.103e-2425.23hypothetical protein NGA_0025320 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3016rna3016Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications