EWM30402.1, cds299 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30402.1 vs. NCBI_GenBank
Match: gi|585113062|gb|EWM30402.1| (hypothetical protein Naga_100026g16 [Nannochloropsis gaditana]) HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
Query: 1 MSFGGGGFGRTPFGGGGNTGTGFGTSTPGGGFGGAQTTPAFGASQTPAFGGPTTQTPSAQGGFGTTGGFGQTSQGGFGSNASTVSPFGGGAGATSTGFGAHHDNNSSAPTYIQAITAMEAYKEKSFEELRTPSAFPSSTGVGATTPSFSFSSPNVTLGGSMQFSQQQQSLQQPQSSLQLQQQQQQQSPFQQQQFYTPQSEQRPFQILMSSSGGRRAALKPEAFDATPPSLQQYRDTPRSAAKLLPRGLRTGALETALGRGPAAASRGGRSGMEEDFPNMVSPASDSFPGRSHKHLVIDQDDIFAAESKIFDLDELPGRDRLVDANGASGTPGGGNPLQRSSSGGGGSRRFNREFKTRRHIAWTQ 364
MSFGGGGFGRTPFGGGGNTGTGFGTSTPGGGFGGAQTTPAFGASQTPAFGGPTTQTPSAQGGFGTTGGFGQTSQGGFGSNASTVSPFGGGAGATSTGFGAHHDNNSSAPTYIQAITAMEAYKEKSFEELRTPSAFPSSTGVGATTPSFSFSSPNVTLGGSMQFSQQQQSLQQPQSSLQLQQQQQQQSPFQQQQFYTPQSEQRPFQILMSSSGGRRAALKPEAFDATPPSLQQYRDTPRSAAKLLPRGLRTGALETALGRGPAAASRGGRSGMEEDFPNMVSPASDSFPGRSHKHLVIDQDDIFAAESKIFDLDELPGRDRLVDANGASGTPGGGNPLQRSSSGGGGSRRFNREFKTRRHIAWTQ
Sbjct: 1 MSFGGGGFGRTPFGGGGNTGTGFGTSTPGGGFGGAQTTPAFGASQTPAFGGPTTQTPSAQGGFGTTGGFGQTSQGGFGSNASTVSPFGGGAGATSTGFGAHHDNNSSAPTYIQAITAMEAYKEKSFEELRTPSAFPSSTGVGATTPSFSFSSPNVTLGGSMQFSQQQQSLQQPQSSLQLQQQQQQQSPFQQQQFYTPQSEQRPFQILMSSSGGRRAALKPEAFDATPPSLQQYRDTPRSAAKLLPRGLRTGALETALGRGPAAASRGGRSGMEEDFPNMVSPASDSFPGRSHKHLVIDQDDIFAAESKIFDLDELPGRDRLVDANGASGTPGGGNPLQRSSSGGGGSRRFNREFKTRRHIAWTQ 364
BLAST of EWM30402.1 vs. NCBI_GenBank
Match: gi|923679744|ref|XP_013653184.1| (PREDICTED: nuclear pore complex protein NUP98B-like [Brassica napus]) HSP 1 Score: 63.929 bits (154), Expect = 2.258e-7 Identity = 58/146 (39.73%), Postives = 71/146 (48.63%), Query Frame = 0
Query: 8 FGRTPFGGGGNTGTGFGTST--PGGGFG----GAQTTPAFGASQTPAFGGPTTQTPSAQGGFGTTGGFGQTSQGGFGSNASTVSPFG--GGAGATSTGFGAHHDNNSSAPTY---------------IQAITAMEAYKEKSFEELR 130
FG +P GN+G+ FG + PGG FG GA TTPAFGAS PAFG T TP+ G T GFGS+ +T SPFG G + ST FG S Y +Q+I+AM +K+K EELR
Sbjct: 186 FGVSPTPAFGNSGSAFGNNAFGPGGAFGTPGFGASTTPAFGASTAPAFGAST--TPAFGASTAPAFGASTTPAFGFGSSPATHSPFGAQGSQSSNSTTFGNQQQGGSRIIPYTSTIDAESGTGGPGKLQSISAMTVHKDKCHEELR 329 The following BLAST results are available for this feature:
BLAST of EWM30402.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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