EWM27699.1, cds2974 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|585109971|gb|EWM27699.1| (u2 small nuclear ribonucleoprotein auxiliary factor u2af [Nannochloropsis gaditana]) HSP 1 Score: 1550.03 bits (4012), Expect = 0.000e+0 Identity = 776/776 (100.00%), Postives = 776/776 (100.00%), Query Frame = 0
Query: 1 MDDGSGVKTRVDEGRATQHIAEKDSDAAPEDHGSSGEAATTVVETGIVKKSSDDEGSREESKERKKKKDKKEKKEKKSKKEKKEKKRSHRDEGSGGEDGERRKKRKEREDDLQGKEEPEESDEDFHRERARRREDRRDVRDYEVRGRRPYDRQRSRSPPRPRNRQTRRRSLSPPRGRMRDNGRRGGPMRRSRSRSRSRSRSRDRGSRGRRRGGRRSRSAGRSASPRAKSRSRSGSSSRRRHQKKANSDDEEESNGGKEEELEPGWVDVVKEGGMGGPLPSLQDMLGQNRGMGVMQALQKIEQIKQLRVFAVQAAGQAQQLLVNTLAAARLAAASPITLADSTKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDKEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDTDAEEVEEIKEEVMDECRKYGNVVSVHMDPAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDLHADPLEEDTAPAEASVGETAGGNGTTETGGTEDGVMSLSLGKKEEEGAEGAREEGKEDPPEEPLPVAVPQAVEEDLD 776
MDDGSGVKTRVDEGRATQHIAEKDSDAAPEDHGSSGEAATTVVETGIVKKSSDDEGSREESKERKKKKDKKEKKEKKSKKEKKEKKRSHRDEGSGGEDGERRKKRKEREDDLQGKEEPEESDEDFHRERARRREDRRDVRDYEVRGRRPYDRQRSRSPPRPRNRQTRRRSLSPPRGRMRDNGRRGGPMRRSRSRSRSRSRSRDRGSRGRRRGGRRSRSAGRSASPRAKSRSRSGSSSRRRHQKKANSDDEEESNGGKEEELEPGWVDVVKEGGMGGPLPSLQDMLGQNRGMGVMQALQKIEQIKQLRVFAVQAAGQAQQLLVNTLAAARLAAASPITLADSTKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDKEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDTDAEEVEEIKEEVMDECRKYGNVVSVHMDPAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDLHADPLEEDTAPAEASVGETAGGNGTTETGGTEDGVMSLSLGKKEEEGAEGAREEGKEDPPEEPLPVAVPQAVEEDLD
Sbjct: 1 MDDGSGVKTRVDEGRATQHIAEKDSDAAPEDHGSSGEAATTVVETGIVKKSSDDEGSREESKERKKKKDKKEKKEKKSKKEKKEKKRSHRDEGSGGEDGERRKKRKEREDDLQGKEEPEESDEDFHRERARRREDRRDVRDYEVRGRRPYDRQRSRSPPRPRNRQTRRRSLSPPRGRMRDNGRRGGPMRRSRSRSRSRSRSRDRGSRGRRRGGRRSRSAGRSASPRAKSRSRSGSSSRRRHQKKANSDDEEESNGGKEEELEPGWVDVVKEGGMGGPLPSLQDMLGQNRGMGVMQALQKIEQIKQLRVFAVQAAGQAQQLLVNTLAAARLAAASPITLADSTKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDKEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDTDAEEVEEIKEEVMDECRKYGNVVSVHMDPAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDLHADPLEEDTAPAEASVGETAGGNGTTETGGTEDGVMSLSLGKKEEEGAEGAREEGKEDPPEEPLPVAVPQAVEEDLD 776
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|970633960|gb|KUF79398.1| (Splicing factor U2AF 50 kDa subunit [Phytophthora nicotianae]) HSP 1 Score: 199.519 bits (506), Expect = 2.177e-53 Identity = 138/381 (36.22%), Postives = 206/381 (54.07%), Query Frame = 0
Query: 333 ASPITLADST--KPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDK-EGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDT--DAEEVEEIKEEVMDECRKYGNVVSVHMD--------PAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDLH 700
AS +T+A + KPAR+LYVGNLP V GPQL EFLS +QQ+ LT PG+P++ W S DG FA + RS++E N AL L++L + G L+ GRP R F M + +A T +G + A T P + + T + A + A A +++ G L+++N+P +L E V+ L+EPFG+LKSF ++KD G S G A+FEYEDK A A++GL GL +GG LS+Q P P A A S + E+ S V+++ NM++ D D EE ++ E+V +EC+++G+V + + P G I+V FG + A L GR F G ++ Y+PL+ + + +L
Sbjct: 18 ASNVTMAAAVAQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQPGNPIINTWTSTDGHFAFCEMRSVEECNLALLLNQLSLLG--QPLKFGRP---RSFMGPPQPMPQVSARTQTALTNLGCTPNPAW--FAQPTVPSTETTTEST---LAEATLSAIAAAQPATAEAGSGHRLIMSNIPVVLTEDQVKELVEPFGKLKSFTLVKDTATGASLGSALFEYEDKDVADQAVEGLNGLSIGGILLSVQRQP---------PNAAALPSAAVTPEDEPSAVLKMANMVSIDELRDDEEYADLAEDVEEECKRFGSVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNGRKFGGNIVKVTYFPLDKFEKNELF 379
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|325179530|emb|CCA13927.1| (splicing factor U2af large subunit putative [Albugo laibachii Nc14]) HSP 1 Score: 206.068 bits (523), Expect = 2.352e-52 Identity = 137/416 (32.93%), Postives = 215/416 (51.68%), Query Frame = 0
Query: 311 VQAAGQAQQLLVNTLAAARLAAASPITLADSTKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTP---GSLSATSLA------GGGMVGAPAAQ-------TALA--AASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDK-EGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIP---AHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADD--TDAEEVEEIKEEVMDECRKYGNVVSVHMDPAQ--------GFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAY 694
Q Q L + + A A+ + A + KPAR+LYVGNLP + GPQL EFL +QQ+ L+ PG+P++ +W+S DG FA + RS++E N AL L++LP+ G L+ GRP + M + + V A + A +LG P S TS G G+ G ++ TALA AS + L+++N+PG+L E V+ L++PFG+L+ F ++KD G S G A FEY++ AL GL GLD+GG +LS++ P + +L P GA+ EE G V+R+ NM+++D + EE ++KE+V +EC+++G ++++ + +Q G IFV + + + AQ L GR F G ++ Y+ L +
Sbjct: 437 TQLMQQYPTLSLQDIIAKMQASNVTMAAAVAMKPARELYVGNLPATITGPQLQEFLGTIIQQVGLSTQPGNPILSVWISTDGHFAFCEMRSVEECNLALLLNQLPLLG--QPLKFGRPRSF---------MGPPQPMPI-----VSARTQTALVNLGCTPNPVWFASPDVTSFGSDPMGFGNGLNGFLSSSSSSLMSATALADSLASLPSDPNATQLLMSNIPGVLAEEQVKELVQPFGELRFFKLIKDPITGQSTGTAFFEYQENQVTTEALNGLDGLDIGGVKLSVRRAPDATKYPQIAVLMP--------GAAGEEPGP-VLRMANMVSEDELKNDEEFADLKEDVEEECKRFGTIIALDIPRSQDGEEIAGTGNIFVRYSDTKEATAAQKALCGRKFGGNVVKVTYFSLSKF 827
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|301121478|ref|XP_002908466.1| (splicing factor U2af large subunit, putative [Phytophthora infestans T30-4] >gi|262103497|gb|EEY61549.1| splicing factor U2af large subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 200.29 bits (508), Expect = 1.043e-51 Identity = 139/381 (36.48%), Postives = 204/381 (53.54%), Query Frame = 0
Query: 333 ASPITLADST--KPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDK-EGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDT--DAEEVEEIKEEVMDECRKYGNVVSVHMD--------PAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDLH 700
AS +T+A + KPAR+LYVGNLP V GPQL EFLS +QQ+ LT PG+P++ W S DG FA + RS++E N AL L++L + G L+ GRP R F M + +A T +G + A A T S T+ +A A A S A S G L+++N+P +L E V+ L+EPFG+LKSF ++KD G S G A+FEYED A A++GL GL +GG LS+Q PA A+ + A+ E+ S V+++ NM++ D D EE ++ E+V +EC+++G V + + P G I+V FG + A L GR F G ++ Y+P++ + + +L
Sbjct: 232 ASNVTMAAAVAQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQPGNPIINTWTSTDGHFAFCEMRSVEECNLALLLNQLSLLG--QPLKFGRP---RSFMGPPQPMPQVSARTQTALTNLGCTPNPA---WFAQHTVSSTETTTTETTLAEATLSAIAAAQPAGSEAVSSGNRLIMSNIPVVLAEEQVKELVEPFGKLKSFTLVKDSATGASLGSALFEYEDSDVAAQAVEGLNGLSIGGILLSVQRQPASSAA-------ALPSAAAANPEDQPSAVLKMANMVSIDELRDDEEYADLAEDVEEECKRFGGVTGMEIPRPKDGEEVPGLGCIYVRFGKEEDAVSALKALNGRKFGGNIVKVTYFPVDKFEKNELF 597
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|953488997|emb|CEG47540.1| (splicing factor u2af large [Plasmopara halstedii]) HSP 1 Score: 202.986 bits (515), Expect = 1.120e-51 Identity = 135/372 (36.29%), Postives = 199/372 (53.49%), Query Frame = 0
Query: 333 ASPITLADST--KPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKD-KEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDT--DAEEVEEIKEEVMDECRKYGNVVSVHMD--------PAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPL 691
AS +T+A + KPAR+LYVGNLP V GPQL EFLS +QQ+ LT PG+P+V W+S DG FA + RS++E N AL L++L + G L+ GRP R F M + +A T +G + A PGS+ T+ +A A +AS+S L+++N+P +L E V+ L+EPFG+LK+F ++KD G S G A+FEYED + A A++GL GL +GG LS+Q P + L A S +E S +++ NM++ D D +E ++ E+V +EC+++G+VV + + P G I+V FG + A L GR F G + Y+P
Sbjct: 345 ASNVTMAAAVAQKPARELYVGNLPPSVTGPQLQEFLSTIIQQVGLTTKPGNPIVNTWISTDGHFAFCEMRSVEECNLALLLNQLSLLG--QPLKFGRP---RSFMGPPQPMPQVSARTQTALTNLGCTPNPAW--FAQPVLPGSMEVTTTESTLAEATLSAIAAAQSASASGAGSEHRLIMSNIPVVLTESQVKELVEPFGKLKTFTLIKDPATGTSLGNALFEYEDSSVAAQAMEGLNGLSIGGILLSVQRQPPASGAGL-----GAFSSAITKSDEQPSAALKMTNMVSIDELRDDDEYADLAEDVEEECKRFGSVVGMEIPRPKEGEDVPGLGCIYVRFGKQEEAVSALKALNGRKFGGNIVNVTYFPF 704
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|695405687|ref|XP_009523890.1| (hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae] >gi|348681357|gb|EGZ21173.1| hypothetical protein PHYSODRAFT_488481 [Phytophthora sojae]) HSP 1 Score: 199.904 bits (507), Expect = 2.934e-51 Identity = 138/391 (35.29%), Postives = 217/391 (55.50%), Query Frame = 0
Query: 333 ASPITLADST--KPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVT-----------VQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDK-EGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADDT--DAEEVEEIKEEVMDECRKYGNVVSVHMD--------PAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDL 699
AS +T+A + KPAR+LYVGNLP V GPQL EFLS +QQ+ LT PG+P++ W+S DG FA + RS++E N AL L++L + G L+ GRP + + + +++ A+T Q AV + AAAA +G +T +A ++A A T + A+ S+ + L+++N+P +L E V+ L+EPFG LKSF ++KD G S G A+FEYED + A++GL GL +GG LS+Q PA A++ P AT + E+ S V+++ NM++ D D +E ++ E+V +EC+++GNV + + P G I+V F + + A L GR F G ++ Y+PL+ + +++
Sbjct: 262 ASNVTMAAAVAQKPARELYVGNLPPNVTGPQLQEFLSTIIQQVGLTTQPGNPIINTWISTDGHFAFCEMRSVEECNLALLLNQLSLLG--QPLKFGRPRSFMGPPQPMPQISARTQTALTNLGCTPNPAWFAQPAVPSLDEAAAAPVGDSSTLAGATAAAVAAAQPAVPAVASTTVDASLSAHR-----LIMSNIPVVLTEDQVKELVEPFGALKSFTLVKDTATGASMGSALFEYEDDSVTAQAVEGLNGLSIGGILLSVQCQPASGAALPAAPGATPNF------EDQPSAVLKMANMVSIDELRDDDEYADLAEDVEEECKRFGNVTGLEIPRPKDGEEVPGLGCIYVRFEEEKNAVDALKALNGRKFGGNIVKVTYFPLDKFDKQEF 639
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|635361103|emb|CCI49835.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 181.415 bits (459), Expect = 4.169e-44 Identity = 136/416 (32.69%), Postives = 213/416 (51.20%), Query Frame = 0
Query: 333 ASPITLADST--KPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQ-------------------TALAAASSSAQS--QGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKD-KEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIP----AHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADD--TDAEEVEEIKEEVMDECRKYGNVVSVHMDPAQ--------GFIFVEFGSARASK--------RAQT---RLEGRSFDGRTIRCRYYPLEAYLRRDL 699
AS +T+A + KPAR+LYVGNLP + GPQL EFL +QQ+ L+ PG+P++ +W+S DG FA + RS++E N AL L++LP+ G L+ GRP + M + + V A + A +LG P ++ +A GM AA TALA + +S S L+++N+P +L E V+ L++PFG+L F ++KD G S G AIFEY++ AL GL GLD+GG +LS++ P Q ++LL GA+ E+ G V+++ NM+++D + EE ++KE+V +EC+++G ++++ + Q G IFV + + + RAQ R EG F IR + L + LR+ +
Sbjct: 386 ASNVTMAAAVAMKPARELYVGNLPATITGPQLQEFLGTIIQQVGLSTQPGNPILSVWISTDGHFAFCEMRSVEECNLALLLNQLPLLG--QPLKFGRPRSF---------MGPPQPMPI-----VSARTQTALVNLGCTPNPVWFASPDVASLGMDSMTAATFGNGLNGYLSSSTSSLMSATALAESLASLPSDPNAAQLLMSNIPSVLAEEQVKELVQPFGELNFFKLIKDPMTGQSTGSAIFEYQENQVTIDALNGLDGLDIGGVKLSVRRAPDATKYPQIAVLL---------PGAAGEDPGP-VLKMANMVSEDELQNDEEFADLKEDVEEECKRFGTILALDIPRPQDEEDVAGTGNIFVRYSDTKEATAALKASIMRAQVRWKRCEGHIFLTEQIRSQGLQLSSSLRQSV 775
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|298713809|emb|CBJ27181.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 180.644 bits (457), Expect = 2.636e-43 Identity = 143/423 (33.81%), Postives = 192/423 (45.39%), Query Frame = 0
Query: 342 TKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDG-RFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGM-VGAPAAQTALAAASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDKEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSV----VIRLQNM-----LADDTDAEEVEEIKEEVMDECRKYGNVVSVHMDPAQ--------GFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDLHADPLEEDTA-----------PAEASVG-ETAGGNGTTETGGTEDG 733
K R+L+VG LP GV G QL +FL+AAMQ +++ G+PV+ I M PDG FA ++LR TE ETNA T G +S G + G P A A A A + + + LM+ N+P L + VR LL PFG+LK FN+LKD G SKG A+FEY D LAL GL+GL +G +L +Q +PA A+ LL+PV E+E +V V+RL NM LADDT E EIK +V++EC +YG V S + + G IFVEF + + + L GR F G+ ++ YYPL+ + +EE A PAE G E G +G G +DG
Sbjct: 745 NKVMRELHVGGLPHGVSGVQLQDFLNAAMQYLKIATSAGNPVIRIAMGPDGTNFAF------------------------IELR----TE-----------EETNA------------------------TLGRMSGIQCGTGHLKFGRPKAHAAGATAVAPKKEESSVLMVMNLPDSLTDDHVRELLSPFGELKKFNLLKDSSGKSKGTAVFEYTDMENGQLALSGLSGLPVGKGKLMVQRVPAMMAATLLKPVKVKE-----VEDEQDNVEPTCVVRLSNMVEVEELADDT---EYAEIKGDVVEECEQYGKVKSAEVPRPEDGKEVLGLGEIFVEFEDVAGATKGRNALAGRKFGGKAVKATYYPLDLFQMGVFGKPSVEEAPAVTKEPEKKHPTPAEVQPGAEQGGAHGFVIVGEADDG 1096
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|1173955063|gb|OQS02136.1| (splicing factor U2af large subunit [Thraustotheca clavata]) HSP 1 Score: 167.162 bits (422), Expect = 1.023e-40 Identity = 121/370 (32.70%), Postives = 180/370 (48.65%), Query Frame = 0
Query: 339 ADSTKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMG--PGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALAAASSSAQ----SQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDKEGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQEIPAHQASMLLRPVATASGSTGASEEEGGSVVIRLQNMLADD--TDAEEVEEIKEEVMDECRKYGNVVSVHMD------PAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAY 694
A S KP R+LYVGNLP V G QL EFL +QQ+ L++ PG+P++ W+S D +FA ++ R+++E N AL L++L + G QL+ GRP + Q SS A + G TP + A + A + + Q + L++AN+P L E V LLEPFG++ F ++KD EG S G A+FEY+D+A +AL GL GLD+ G L +Q P P A E + VI L NM+ + D E E+KE++ +EC KYG++VS+ + P G +F+ F + + A L+GR F G + Y ++ +
Sbjct: 156 AVSLKPMRELYVGNLPPNVTGSQLQEFLGTIIQQVGLSLPGQPGNPILSAWISTDNQFAFLEMRTVEECNLALLLNQLNMLG--RQLKFGRPRSF----------------VGPAQPMPNISSRTQTALVNLGCTPNPMWFAGGAAACGLAAAGLLAPNSGFTDIGQLPPDNTSNRLLMANIPTALQENQVAQLLEPFGEVSRFLLVKDSEGNSTGSALFEYKDEAVTQVALDGLNGLDIAGSNLIVQRAPPQGVIPEYNP--------NAPHERAPTEVIELGNMVQESELEDEETFNELKEDIEEECSKYGSIVSLVIPRPQDGIPGVGKVFIRFENIAGAVTALKALKGRKFGGNVVAVSYIDVDDF 499
BLAST of EWM27699.1 vs. NCBI_GenBank
Match: gi|1113791801|ref|XP_019356435.1| (PREDICTED: splicing factor U2AF 65 kDa subunit isoform X1 [Alligator mississippiensis]) HSP 1 Score: 166.007 bits (419), Expect = 1.579e-40 Identity = 137/424 (32.31%), Postives = 207/424 (48.82%), Query Frame = 0
Query: 300 IEQIKQLRVFAVQAAGQAQQL-LVNTLAAARLAAAS---PITLADSTKPARQLYVGNLPVGVLGPQLAEFLSAAMQQMQLTMGPGSPVVGIWMSPDGRFALVDFRSLDEANKALALDKLPVGGGTMQLRVGRPTEYREFYETLLKMTETNALAVTVQHAVGASSGAAAASLGAGTTPGSLSATSLAGGGMVGAPAAQTALA-AASSSAQSQGQFLMLANVPGILGEVDVRALLEPFGQLKSFNMLKDK-EGMSKGIAIFEYEDKAQAGLALKGLAGLDLGGKRLSIQ--EIPAHQASMLL---RPVAT-ASGSTGASEEEGG--SVVIRLQNML--ADDTDAEEVEEIKEEVMDECRKYGNVVSVHMD--------PAQGFIFVEFGSARASKRAQTRLEGRSFDGRTIRCRYYPLEAYLRRDL 699
E I ++ A+QAAGQ L+ T+ LA P+ + T+ AR+LYVGN+P G+ + +F +A M+ LT PG+PV+ + ++ D FA ++FRS+DE +A+A D + G ++++R RP + Y+ L M+E ++ V P SL + G + P + + LA S+ L + +P L + V+ LL FG LK+FN++KD G+SKG A EY D A+ GL G+ LG K+L +Q + A A++ PV G + + GG + V+ L NM+ + D EE EEI E+V DEC KYG V S+ + P G IFVEF S ++A L GR F R + +Y ++Y RRD
Sbjct: 94 FEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIR--RPHD----YQPLPGMSENPSVYV----------------------PDSLRHPRVCWGAL--TPFSASPLAGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGVVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDF 487 The following BLAST results are available for this feature:
BLAST of EWM27699.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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