EWM27747.1, cds2966 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|585110020|gb|EWM27747.1| (hypothetical protein Naga_100034g5 [Nannochloropsis gaditana]) HSP 1 Score: 530.406 bits (1365), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MSLPRAEERPESQDVSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVGTRTKVTELMRAPHLIANHRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPVEKLVLLNGDVLERM 261 MSLPRAEERPESQDVSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVGTRTKVTELMRAPHLIANHRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPVEKLVLLNGDVLERM Sbjct: 1 MSLPRAEERPESQDVSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVGTRTKVTELMRAPHLIANHRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPVEKLVLLNGDVLERM 261
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|298711158|emb|CBJ32383.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 181.415 bits (459), Expect = 1.274e-52 Identity = 104/252 (41.27%), Postives = 149/252 (59.13%), Query Frame = 0 Query: 13 QDVSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARR--LCYPPYLLARMLVEVLCKVGTRTKVTELMRAPHLIANHRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQ----ECHVVVIDDFPPPVEKLVLLNGDVL 258 + + DAL S+R Q RH++ V ++ + QY G I +IAR+ L Y PYL+AR+LV L + +LMR P LI + RLRREV CI+ DRD+SP DRV R +G +YE LQ +LRA + FE E+ LR +G KTPD+ L P+ V + +V+WIDSKA++G T+ E Q+ YVNR+GPG V++WFG+ V+ L+S + + ++V DFP P+ +L +G VL Sbjct: 31 ESLPYDALQSLRRQMFSRHIRKVDWRCKQRTKEFLTQYRKGSRIIDIARQPGLRYSPYLMARILVGALEPGAA---IAQLMRTPSLILDERLRREVEECISDDRDYSPHLDRVRRGVGAEYEFVLQQKLRARGVAFESESDLRQKGAYKTPDMLLQTPMAVKGPRNEWVIVSWIDSKAMFGDEHTYVQEHQSQLLSYVNRYGPGLVIYWFGY---VETLVSPEFDGYKKDIMVKADFPSPI---MLPDGQVL 273
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|219112087|ref|XP_002177795.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410680|gb|EEC50609.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 154.451 bits (389), Expect = 2.187e-41 Identity = 93/260 (35.77%), Postives = 137/260 (52.69%), Query Frame = 0 Query: 29 VRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVGTRTKVTELMRAPHLIAN-------------------------HRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGV----VDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPVEKLVLLNGDVLE 259 V HVK S ++ + +Y AG +I E+A++ +PPYLLAR +VE + + +R+ +TE MR P I + R+ EV I D + P DR ++G+++E L+ L +PFE EA LR+RG KTPDV L+ PLGV D + VV WIDSKAL+G +T + VLPQ Y++RFGPG +++WFG P ++ L Q V+ + P +L+L GD++E Sbjct: 84 VIHVKRQSSAIKKSLGNLADKYMAGSTIVELAKKENFPPYLLARWMVETITSINSRSALTEAMREPATILDPSVILPDYKESESVRPSCSSDSSVPSRISLEVQEAINADPMYGPLHDRERHTVGVEFEVVLEHLLSTRGLPFESEAELRSRGTAKTPDVLLTAPLGVPVRDKDGNEEWKVVCWIDSKALFGDVQTHQTSVLPQAETYLHRFGPGMIIYWFGHAP-LERLDDAQGDLVIQGWELP---TRLMLPTGDIVE 339
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|675207683|ref|XP_008912726.1| (hypothetical protein PPTG_16713 [Phytophthora parasitica INRA-310] >gi|567950107|gb|ETK75826.1| hypothetical protein L915_17623 [Phytophthora parasitica] >gi|568087170|gb|ETN02045.1| hypothetical protein PPTG_16713 [Phytophthora parasitica INRA-310] >gi|570316366|gb|ETO64314.1| hypothetical protein F444_18129 [Phytophthora parasitica P1976] >gi|570940133|gb|ETP05390.1| hypothetical protein F441_17989 [Phytophthora parasitica CJ01A1] >gi|570970409|gb|ETP33528.1| hypothetical protein F442_17951 [Phytophthora parasitica P10297]) HSP 1 Score: 152.14 bits (383), Expect = 7.085e-41 Identity = 97/254 (38.19%), Postives = 144/254 (56.69%), Query Frame = 0 Query: 15 VSLDALLSIRHQRLVRHVKAVSGDHRRH--VLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVG-TRTKVTELMRA-----PHLIA---NHR---------LRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDA-CGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPV 247 VS + I+ Q L ++ HR+ + Y +Y AG+S+ +IA+ + + P ++AR+L++ K G ++T ++ L + L A NHR + RE+ CI+ D SP ADR+ ++G++YE L LR + FE E MLR +GL KTPDVRL +P+GV + GK HVVNWIDSKA++G R T E E Q+ YVNR+GPG V++WFG V EL S + +++ D FP + Sbjct: 25 VSEETFSVIKRQLLHHQYRSELRLHRQEKTLKNYVARYSAGESMRQIAKSVSFSPCMMARVLLD--AKYGWSKTTISNLFKEAMKDESELEADAPNHRGLSEDEYSRVVREIRECISKDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKSSKTGKLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGH---VAELSS--DSDILITDTFPQEI 271
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|568038181|gb|ETM35722.1| (hypothetical protein L914_17420 [Phytophthora parasitica]) HSP 1 Score: 152.14 bits (383), Expect = 8.494e-41 Identity = 97/258 (37.60%), Postives = 144/258 (55.81%), Query Frame = 0 Query: 15 VSLDALLSIRHQRLVRHVKAVSGDHRRH--VLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVG-TRTKVTELMR------------APHLIANHR---------LRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDA-CGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPV 247 VS + I+ Q L ++ HR+ + Y +Y AG+S+ +IA+ + + P ++AR+L++ K G ++T ++ L + AP NHR + RE+ CI+ D SP ADR+ ++G++YE L LR + FE E MLR +GL KTPDVRL +P+GV + GK HVVNWIDSKA++G R T E E Q+ YVNR+GPG V++WFG V EL S + +++ D FP + Sbjct: 25 VSEETFSVIKRQLLHHQYRSELRLHRQEKTLKNYVARYSAGESMRQIAKSVSFSPCMMARVLLD--AKYGWSKTTISNLFKEVMKDESKLEADAP----NHRGLSEDEYSRVVREIRECISKDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKSSKTGKLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGH---VAELSS--DSDILITDTFPQEI 271
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|566012660|gb|ETI35571.1| (hypothetical protein F443_18108 [Phytophthora parasitica P1569] >gi|567978774|gb|ETL29260.1| hypothetical protein L916_17518 [Phytophthora parasitica]) HSP 1 Score: 150.984 bits (380), Expect = 2.314e-40 Identity = 96/254 (37.80%), Postives = 144/254 (56.69%), Query Frame = 0 Query: 15 VSLDALLSIRHQRLVRHVKAVSGDHRRH--VLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVG-TRTKVTELMRA-----PHLIA---NHR---------LRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDA-CGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPV 247 VS + I+ Q L ++ HR+ + Y +Y AG+S+ +IA+ + + P ++AR++++ K G ++T ++ L + L A NHR + RE+ CI+ D SP ADR+ ++G++YE L LR + FE E MLR +GL KTPDVRL +P+GV + GK HVVNWIDSKA++G R T E E Q+ YVNR+GPG V++WFG V EL S + +++ D FP + Sbjct: 25 VSEETFSVIKRQLLHHQYRSELRLHRQEKTLKNYVARYSAGESMRQIAKSVSFSPCMMARVVLD--AKYGWSKTTISNLFKEAMKDESELEADAPNHRGLSEDEYSRVVREIRECISKDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKSSKTGKLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGH---VAELSS--DSDILITDTFPQEI 271
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|568008249|gb|ETL82470.1| (hypothetical protein L917_17359 [Phytophthora parasitica]) HSP 1 Score: 147.517 bits (371), Expect = 4.765e-39 Identity = 95/254 (37.40%), Postives = 143/254 (56.30%), Query Frame = 0 Query: 15 VSLDALLSIRHQRLVRHVKAVSGDHRRH--VLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVG-TRTKVTELMRA-----PHLIA---NHR---------LRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDA-CGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPV 247 VS + I+ Q L ++ HR+ + Y +Y AG+S+ +IA+ + + P ++AR++++ K G ++T ++ L + L A NHR + RE+ CI+ D SP ADR+ ++G++YE L LR + FE E MLR +GL KTPDVRL +P+GV + GK VVNWIDSKA++G R T E E Q+ YVNR+GPG V++WFG V EL S + +++ D FP + Sbjct: 25 VSEETFSVIKRQLLHHQYRSELRLHRQEKTLKNYVARYSAGESMRQIAKSVSFSPCMMARVVLD--AKYGWSKTTISNLFKEAMKDESELEADAPNHRGLSEDEYSRVVREIRECISKDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKSSKTGKLRVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGH---VAELSS--DSDILITDTFPQEI 271
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|970661999|gb|KUF99420.1| (hypothetical protein AM587_10008799 [Phytophthora nicotianae]) HSP 1 Score: 150.599 bits (379), Expect = 1.795e-38 Identity = 97/254 (38.19%), Postives = 144/254 (56.69%), Query Frame = 0 Query: 15 VSLDALLSIRHQRLVRHVKAVSGDHRRH--VLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVG-TRTKVTELMRA-----PHLIA---NHR---------LRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDA-CGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPV 247 VS + I+ Q L ++ HR+ + Y +Y AG+S+ +IA+ + + P ++AR+L++ K G ++T ++ L + L A NHR + RE+ CI+ D SP ADR+ ++G++YE L LR + FE E MLR +GL KTPDVRL +P+GV + GK HVVNWIDSKA++G R T E E Q+ YVNR+GPG V++WFG V EL S + +++ D FP + Sbjct: 256 VSEETFSVIKRQLLHHQYRSELRLHRQEKTLKNYVARYSAGESMRQIAKSVSFSPCMMARVLLD--AKYGWSKTTISNLFKEAMKDESELEADAPNHRGLSEDEYSRVVREIRECISKDEIGSPLADRIRHNMGVEYEYLLLETLRNRQLVFESEDMLREKGLSKTPDVRLLLPIGVKSSKTGKLHVVNWIDSKAMFGDRHTHETENASQLQGYVNRYGPGMVIYWFGH---VAELSS--DSDILITDTFPQEI 502
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|1207920669|ref|XP_021349266.1| (uncharacterized protein C15orf41-like [Mizuhopecten yessoensis] >gi|1205905295|gb|OWF52494.1| Uncharacterized protein C15orf41 [Mizuhopecten yessoensis]) HSP 1 Score: 143.665 bits (361), Expect = 5.231e-38 Identity = 95/260 (36.54%), Postives = 134/260 (51.54%), Query Frame = 0 Query: 10 PESQDVSLDALLSIRHQRLVRHVKAVSGDHRR--HVLAYCRQYEAG------QSIHEIARRLCYPPYLLARMLVE---VLCKVGT----RTKVTELMRAPHLIANHRLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFPPPVEKLVLLN 254 P +VS+ AL SI Q + ++ H Y +Y AG I IAR + P LL+RM++E K G R++VT+LM+ LI NH L E+ CI D + P D++ SIG +YE +L L +L + + E +RA+G KTPDV+L VP+ V H+VNWI+SKA +G + + Q Y NRFGPG V++WFGF + EL S E +++ D FP E +V LN Sbjct: 28 PRYPEVSVGALGSIYAQDYQKKMRKTHHLHYSPDTTEYYYDRYRAGVDSGQKHVILSIARNIDLAPSLLSRMILERHLSRTKYGGENPPRSQVTQLMKDTTLIENHVLANEIHECILSDDQYGPLVDKIKHSIGHEYEFKLNSTLDSLQLSYIGEDQMRAKGYDKTPDVKLEVPIAV-----DGHMVNWIESKASFGDEYSHRSYLKDQFWSYWNRFGPGMVIYWFGF---IDELDSNTEKGIILRDSFP---ENIVRLN 276
BLAST of EWM27747.1 vs. NCBI_GenBank
Match: gi|255069911|ref|XP_002507037.1| (hypothetical protein MICPUN_54817 [Micromonas commoda] >gi|226522312|gb|ACO68295.1| hypothetical protein MICPUN_54817 [Micromonas commoda]) HSP 1 Score: 143.665 bits (361), Expect = 8.699e-38 Identity = 98/254 (38.58%), Postives = 129/254 (50.79%), Query Frame = 0 Query: 15 VSLDALLSIRHQRLVRHVKAVSGDHRRHVLAYCRQYEAGQSIHEIARRLCYPPYLLARMLVEVLCKVGTRTKVTELMRAPH------------LIANH------------RLRREVMHCIAVDRDFSPGADRVSRSIGLDYERELQLRLRALAIPFEDEAMLRARGLPKTPDVRLSVPLGVVDACGKHHVVNWIDSKALYGTRETFEGEVLPQVTRYVNRFGPGCVVFWFGFCPGVQELLSLQECHVVVIDDFP 244 VSLDAL+SI Q R +KA G H R + + R+Y AG+ I ++A + +PP L R+LVE L VG + L+R PH A+H R+R +V C+A D SP D S G +YE L+ +L AL +PF E LRA G KTPDV+L +P+ V + VVNWIDSKA + Q YV+RFGPG VV+W G + E S V+V+DDFP Sbjct: 34 VSLDALVSICAQESSRRIKAHHGRHARAISDHARRYLAGEDIFDVAHAVDFPPCQLMRLLVEHLLGVGHKA-AGALIRDPHGRVPIHPPPESPAGAHHADDPVAGAALCERIRFDVERCVAWDHVASPAVDASRHSAGREYEDLLEEKLNALGVPFVSEGSLRAEGHAKTPDVKLELPIAV-----RGRVVNWIDSKASFCDPIVHYERGAEQFQGYVDRFGPGMVVYWLGVVDEIAE-ESESRGDVLVVDDFP 280 The following BLAST results are available for this feature:
BLAST of EWM27747.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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