EWM27740.1, cds2960 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM27740.1
Unique Name	cds2960
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002460.1:380605..380737 +
Alignment location	CM002460.1:380912..383485 +
Alignment location	CM002460.1:383604..383695 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM27740.1
Product	Armadillo-like helical
Orig transcript id	gnl\|cribi\|Naga_100034g11.6313.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002460.1	supercontig	CM002460.1:380605..380737 +
CM002460.1	supercontig	CM002460.1:380912..383485 +
CM002460.1	supercontig	CM002460.1:383604..383695 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0000502	proteasome complex

Vocabulary: **Biological Process**
Term	Definition
GO:0009056	catabolic process
GO:0019538	protein metabolic process
GO:0042176	regulation of protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0030234	enzyme regulator activity

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR016643	26S_Psome_Rpn1
IPR002015	Proteasome/cyclosome_rpt
IPR011989	ARM-like

Homology

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|585110013|gb|EWM27740.1| (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 1899.4 bits (4919), Expect = 0.000e+0
Identity = 932/932 (100.00%), Postives = 932/932 (100.00%), Query Frame = 0

Query:    1 MPNPDGDGDGKNSSKDDKRQAVALMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEADEISAEDQALLEGLQLAVERAQDKDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTADAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLVADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYTIQAAECGGGLICMICDPAFLQFPTFRGVQA 932
            MPNPDGDGDGKNSSKDDKRQAVALMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEADEISAEDQALLEGLQLAVERAQDKDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTADAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLVADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYTIQAAECGGGLICMICDPAFLQFPTFRGVQA
Sbjct:    1 MPNPDGDGDGKNSSKDDKRQAVALMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEADEISAEDQALLEGLQLAVERAQDKDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTADAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLVADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYTIQAAECGGGLICMICDPAFLQFPTFRGVQA 932

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|695373800|ref|XP_009515136.1| (hypothetical protein PHYSODRAFT_343670 [Phytophthora sojae] >gi|348688047|gb|EGZ27861.1| hypothetical protein PHYSODRAFT_343670 [Phytophthora sojae])

HSP 1 Score: 1055.05 bits (2727), Expect = 0.000e+0
Identity = 536/895 (59.89%), Postives = 685/895 (76.54%), Query Frame = 0

Query:   19 RQAVALMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEA---DEISAEDQALLEGLQLAVERAQDK--DAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTA-DAPQP-VEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQE--DADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            ++   + VP  DP   + ++        PD     + +++A   +E+S ED+ L E L+ AV R  DK  + GV+++ALE LR+EIR ATSSMTSVPKPLKFLRP Y  L   Y          E +KL+ DVLAVLAMTMA  GSRESL+FKL  N+ DLGSWGHEFVRSLAGE+GEEY +R TA DA  P V DLL +V  IVPFH+QHNA  EA+D+L+EVQ+L +LL+   +DE NYQR+CLYLL CADFM+D DDL  +L TAY L+ +   Y DALRVA+++ ND   + ++F++  D+  + Q+ +++GR     + E E +     NE++GNS LS+ +L LA+DLDV++ KTPEDI+KSHL+ET    R R+ +G+   DSARANLASTFVNA VN GY  D L+TPEGN WLYKNK HGMMSAAAS+G I+LWNVEEG+ QIDK+++S +E+++AGA+L +G+VS+G+R + D ALALLSEH++S +  +R A+  GLG+AYAGS RED+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES++ +LD+  ARFL LGL L +LG+ E+ +AMLEA KT+EHKM +  A+ LET AYAGSGNVLKVQ++L  CAEH+++  +A HQSVAVLGIALIT+GE +G+EMA+RSFDHLL YGE+ +RRAVPLAFALL VSNP+Y +ID LSRLTHD D  VAQNA+LALG++  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQG LH GKGL+++ PFHSDRL+ S V ++G+LT+LHA+LDM++T+LD  HY+L+    AM PRMLITLDE+LNPLPV+VRVGQAVE VGQAGRPK+ITGFQTHTTPVLL VKDRAELA+ EYL  T
Sbjct:  514 KETAQIPVPTKDPAAAKDDKT-------PDAAKATNPAEDAPVEEELSEEDRKLKEDLETAVARVCDKQEELGVKQLALELLRREIRTATSSMTSVPKPLKFLRPSYDDLKAAYETLQ----AGETQKLMADVLAVLAMTMAKEGSRESLKFKLLGNSTDLGSWGHEFVRSLAGEVGEEYNARITAEDAVDPDVRDLLEIVDAIVPFHMQHNAEPEAIDILIEVQQLSKLLQSPDIDEKNYQRVCLYLLACADFMSDADDLVNLLNTAYSLFLRLEQYPDALRVALRVGND-DFVAEVFQKCKDDVVRNQMGYILGRQRCFYEDESEAS----ANEIIGNSDLSDKFLSLARDLDVMEAKTPEDIYKSHLSETASVGRGRD-SGSQPADSARANLASTFVNALVNAGYGTDKLMTPEGNTWLYKNKKHGMMSAAASLGMIMLWNVEEGITQIDKYLYSGDEYVKAGAILGVGVVSAGIRNDCDPALALLSEHIDSGNCSIRCASCLGLGIAYAGSAREDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESSDTELDSSCARFLALGLGLLYLGRQERVEAMLEAAKTIEHKMSKYLAITLETCAYAGSGNVLKVQQLLRTCAEHIEDPIEAQHQSVAVLGIALITMGESIGSEMAMRSFDHLLQYGEVAVRRAVPLAFALLSVSNPEYALIDTLSRLTHDVDSGVAQNAILALGLVAAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGLLHMGKGLMTLHPFHSDRLIMSRVAVSGLLTILHASLDMEHTILDTSHYILYCIATAMQPRMLITLDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVKDRAELATEEYLPLT 1391

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|970635749|gb|KUF80575.1| (26S proteasome non-ATPase regulatory subunit 2 [Phytophthora nicotianae])

HSP 1 Score: 1051.58 bits (2718), Expect = 0.000e+0
Identity = 538/887 (60.65%), Postives = 686/887 (77.34%), Query Frame = 0

Query:   36 KEERGVP-PKPEPDDKDKK--DKSKEAD---------EISAEDQALLEGLQLAVER--AQDKDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTA-DAPQP-VEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQE--DADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            KE   +P P  +P  KD K  D +K A+         E+S ED+ L E L+ AV R     ++ GV+++ALE LR+EIR ATSSMTSVPKPLKFLRP Y    D+ T  A +  G E +KL+ DVLAVLAMTMA  GSRESL+FKL  N+ DLGSWGHEFVRSLAGE+GEEY +R TA +A  P V DLL +V  IVPFH+QHNA  EA+D+L+EVQ+L +LL+   +DE NYQR+CLYLL CADFM+D +DL  +L TAY L+ +   Y DALRVA+++ ND   + ++F++  D+  + Q+ +++GR     + E E +     NE++GNS LS+ +L LA+DLDV++ KTPEDI+KSHL+ET    R R+ +G+   DSARANLASTFVNA VN GY  D L+TPEGN WLYKNK HGMMSAAAS+G I+LWNVEEG+ QIDK+++S +E+++AGA+L +G+VS+G+R + D ALALLSEH++S +  +R A+  GLG+AYAGS RED+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES++A+LD+  ARFL LGL L +LG+ E+ +AMLEA KT+EHKM +  A+ LET AYAGSGNVLKVQ++L  CAEH+++  +A HQSVAVLGIALIT+GE +G+EMA+RSFDHLL YGE+ +RRAVPLAFALL VSNP+Y +ID LSRLTHD D  VAQNA+LALG++  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQG LH GKGL+++ PFHSDRL+ S V ++G+LT+LHA+LDM++T+LD  HY+L+    AM PRMLITLDE+LNPLPV+VRVGQAVE VGQAGRPK+ITGFQTHTTPVLL VKDRAELA+ EY+  T
Sbjct:    2 KETAQIPVPAKDPAAKDDKTPDAAKTANPTEDGPTEEELSEEDRKLKEDLETAVARVCGPQEEIGVKQLALELLRREIRTATSSMTSVPKPLKFLRPSYD---DLKTAYATFQAG-ETKKLMADVLAVLAMTMAKEGSRESLKFKLLGNSTDLGSWGHEFVRSLAGEVGEEYNARITAENAVDPDVRDLLEIVDAIVPFHMQHNAEPEAIDILIEVQQLAKLLKSPDIDEKNYQRVCLYLLACADFMSDAEDLVNLLNTAYSLFLRLEQYPDALRVALRVGND-DFVTEVFQKCKDDVVRSQMGYILGRQRCFYEDESEAS----ANEIIGNSDLSDKFLALARDLDVMEAKTPEDIYKSHLSETASVGRGRD-SGSQPADSARANLASTFVNALVNAGYGTDKLMTPEGNTWLYKNKKHGMMSAAASLGMIMLWNVEEGITQIDKYLYSGDEYVKAGAILGVGVVSAGIRNDCDPALALLSEHIDSGNCSIRCASCLGLGIAYAGSAREDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESSDAELDSSCARFLALGLGLLYLGRQERVEAMLEAAKTIEHKMSKYLAITLETCAYAGSGNVLKVQQLLRTCAEHIEDPIEAQHQSVAVLGIALITMGENIGSEMAMRSFDHLLQYGEVAVRRAVPLAFALLSVSNPEYALIDTLSRLTHDVDSGVAQNAILALGLVAAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGLLHMGKGLMTLHPFHSDRLIMSRVAVSGLLTILHASLDMEHTILDTSHYILYCIATAMQPRMLITLDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVKDRAELATEEYIPLT 878

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|675202529|ref|XP_008910149.1| (hypothetical protein PPTG_14544 [Phytophthora parasitica INRA-310] >gi|566017094|gb|ETI40005.1| hypothetical protein F443_14486 [Phytophthora parasitica P1569] >gi|567954453|gb|ETK80087.1| hypothetical protein L915_14132 [Phytophthora parasitica] >gi|567983113|gb|ETL33512.1| hypothetical protein L916_14027 [Phytophthora parasitica] >gi|568012622|gb|ETL86800.1| hypothetical protein L917_13820 [Phytophthora parasitica] >gi|568042668|gb|ETM39990.1| hypothetical protein L914_13941 [Phytophthora parasitica] >gi|568089915|gb|ETN04755.1| hypothetical protein PPTG_14544 [Phytophthora parasitica INRA-310] >gi|570320811|gb|ETO68759.1| hypothetical protein F444_14484 [Phytophthora parasitica P1976] >gi|570944570|gb|ETP09827.1| hypothetical protein F441_14367 [Phytophthora parasitica CJ01A1] >gi|570976014|gb|ETP37910.1| hypothetical protein F442_14329 [Phytophthora parasitica P10297])

HSP 1 Score: 1050.04 bits (2714), Expect = 0.000e+0
Identity = 538/887 (60.65%), Postives = 686/887 (77.34%), Query Frame = 0

Query:   36 KEERGVP-PKPEPDDKDKK--DKSKEAD---------EISAEDQALLEGLQLAVER--AQDKDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTA-DAPQP-VEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQE--DADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            KE   +P P  +P  KD K  D +K A+         E+S ED+ L E L+ AV R     ++ GV+++ALE LR+EIR ATSSMTSVPKPLKFLRP Y    D+ T  A +  G E +KL+ DVLAVLAMTMA  GSRESL+FKL  N+ DLGSWGHEFVRSLAGE+GEEY +R TA +A  P V DLL +V  IVPFH+QHNA  EA+D+L+EVQ+L +LL+   +DE NYQR+CLYLL CADFM+D +DL  +L TAY L+ +   Y DALRVA+++ ND   + ++F++  D+  + Q+ +++GR     + E E +     NE++GNS LS+ +L LA+DLDV++ KTPEDI+KSHL+ET    R R+ +G+   DSARANLASTFVNA VN GY  D L+TPEGN WLYKNK HGMMSAAAS+G I+LWNVEEG+ QIDK+++S +E+++AGA+L +G+VS+G+R + D ALALLSEH++S +  +R A+  GLG+AYAGS RED+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES++A+LD+  ARFL LGL L +LG+ E+ +AMLEA KT+EHKM +  A+ LET AYAGSGNVLKVQ++L  CAEH+++  +A HQSVAVLGIALIT+GE +G+EMA+RSFDHLL YGE+ +RRAVPLAFALL VSNP+Y +ID LSRLTHD D  VAQNA+LALG++  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQG LH GKGL+++ PFHSDRL+ S V ++G+LT+LHA+LDM++T+LD  HY+L+    AM PRMLITLDE+LNPLPV+VRVGQAVE VGQAGRPK+ITGFQTHTTPVLL VKDRAELA+ EY+  T
Sbjct:    2 KETAQIPVPAKDPAAKDDKTPDAAKTANPTEDGPTEEELSEEDRKLKEDLETAVARVCGPQEEIGVKQLALELLRREIRTATSSMTSVPKPLKFLRPSYD---DLKTAYATFQAG-ETKKLMADVLAVLAMTMAKEGSRESLKFKLLGNSTDLGSWGHEFVRSLAGEVGEEYNARITAENAVDPDVRDLLEIVDAIVPFHMQHNAEPEAIDILIEVQQLAKLLKSPDIDEKNYQRVCLYLLACADFMSDAEDLVNLLNTAYSLFLRLEQYPDALRVALRVGND-DFVTEVFQKCKDDVVRSQMGYILGRQRCFYEDESEAS----ANEIIGNSDLSDKFLALARDLDVMEAKTPEDIYKSHLSETASVGRGRD-SGSQPADSARANLASTFVNALVNAGYGTDKLMTPEGNTWLYKNKKHGMMSAAASLGMIMLWNVEEGITQIDKYLYSGDEYVKAGAILGVGVVSAGIRNDCDPALALLSEHIDSGNCSIRCASCLGLGIAYAGSAREDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESSDAELDSSCARFLALGLGLLYLGRQERVEAMLEAAKTIEHKMSKYLAITLETCAYAGSGNVLKVQQLLRTCAEHIEDPIEAQHQSVAVLGIALITMGENIGSEMAMRSFDHLLQYGEVAVRRAVPLAFALLSVSNPEYALIDTLSRLTHDVDSGVAQNAILALGLVAAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGLLHMGKGLMTLHPFHSDRLIMSRVAVSGLLTILHASLDMEHTILDTSHYILYCIATAMQPRMLITLDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVKDRAELATEEYIPLT 878

[Close]

BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|953489057|emb|CEG47431.1| (26s proteasome non-atpase regulatory subunit 2 [Plasmopara halstedii])

HSP 1 Score: 1048.88 bits (2711), Expect = 0.000e+0
Identity = 534/881 (60.61%), Postives = 679/881 (77.07%), Query Frame = 0

Query:   43 PKPEPDDKDKKDKSKEA-------------DEISAEDQALLEGLQLAVERAQD--KDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTA-DAPQP-VEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQE--DADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            P P  D     DK+ E+             +E+S ED+ L + L  AV R  D  +D GV+ +ALE LR+EIR+ATSSMTSVPKPLKFLRP Y TL   Y     +  G + ++L+ D+LAVLAMTMA  GSRESL+FKL  N+ DLGSWGHEFVRSLAGE+GEEY +R TA DA  P V DL+ +V  IVPFH+QHNA  EA+D+L+E Q+L +LL+ + +DE NYQR+CLYLL CADFM+D DDL  +L TAY L+ +   Y DALRVA+++NND   + ++F++  D+  + Q+ +++GR     + E E +     NE++GNS LS+ +L LA+DLDV++ KTPEDI+KSHL+ET    R R+ +GA   DSARANLASTFVNA VN GY  D L+TPEGN WLYKNK HGMMSAAAS+G I+LWNVEEG+ QIDK+++S +E+++AGA+L +G+VS+G+R + D ALALLSEH++S +  +R A+  GLG+AYAGS RED+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES++A+LD+  ARFL LGL L +LG+ E+ +AMLEA KT+EHKM +  A+ LET AYAGSGNVLKVQ++L  CAEH+++  +A HQSVAVLGIALIT+GE +G+EMA+RSFDHLL YGE+ +RRAVPLAFALL VSNP+Y +ID LSRLTHD D  V QNA+LALG+I  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQG LH GKGL+++ PFHSDRL+ S V ++G+LT+LHAALDM++T+LD  HY+L+    AM PRMLITLDE+LNPLPV+VRVGQAVE VGQAGRPK+ITGFQTHTTPVLL V+DRAELA+ EYL  T
Sbjct:    8 PVPAKDPATGDDKTTESTKSNNIVEDAPAEEELSEEDRKLKDDLDTAVARVCDPQEDVGVKHLALELLRREIRSATSSMTSVPKPLKFLRPSYDTLKVAYDT---FQAG-KTKQLMADILAVLAMTMAKEGSRESLKFKLLGNSTDLGSWGHEFVRSLAGEVGEEYNARLTAEDAVDPDVNDLMEIVDAIVPFHMQHNAEPEAIDILIETQQLSKLLDTSHIDEKNYQRVCLYLLACADFMSDADDLVNLLNTAYSLFLRLEQYPDALRVALRVNND-DFVAEVFQKCKDDVVRNQMGYILGRQRCFYEDESEVS----ANEIIGNSDLSDKFLSLARDLDVMEAKTPEDIYKSHLSETASIGRGRD-SGAVPTDSARANLASTFVNALVNAGYGVDKLMTPEGNTWLYKNKKHGMMSAAASLGMIMLWNVEEGITQIDKYLYSGDEYVKAGAILGVGVVSAGIRNDCDPALALLSEHIDSGNCSIRCASCLGLGIAYAGSAREDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESSDAELDSSCARFLALGLGLLYLGRQERVEAMLEAAKTIEHKMSKYLAITLETCAYAGSGNVLKVQQLLRTCAEHIEDPIEAQHQSVAVLGIALITMGESIGSEMAMRSFDHLLQYGEVAVRRAVPLAFALLSVSNPEYALIDTLSRLTHDVDSGVGQNAILALGLIAAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGLLHMGKGLMTLHPFHSDRLIMSRVAVSGLLTILHAALDMEHTILDTSHYILYCIATAMQPRMLITLDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVRDRAELATEEYLPLT 878

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|301116906|ref|XP_002906181.1| (26S proteasome non-ATPase regulatory subunit 2 [Phytophthora infestans T30-4] >gi|262107530|gb|EEY65582.1| 26S proteasome non-ATPase regulatory subunit 2 [Phytophthora infestans T30-4])

HSP 1 Score: 1044.65 bits (2700), Expect = 0.000e+0
Identity = 535/887 (60.32%), Postives = 677/887 (76.32%), Query Frame = 0

Query:   37 EERGVPPKPEPDDKDKKDKSKEA-------------DEISAEDQALLEGLQLAVER--AQDKDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTAD--APQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQE--DADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            +E    P P  D   K DKS +A             +E+S ED+ L E L+ AV R     ++ GV+++ALE LR+EIR ATSSMTSVPKPLKFLRP Y  L   Y      P   E +KL+ DVLAVLAMTMA   SRESL+FKL  N+ DLGSWGHEFVRSLAGE+GEEY +R TA+      V DLL +V  IVPFH+QHNA  EA+D+L+EVQ+L +LL+   +DE NYQR+CLYLL CADFM+D DDL  +L TAY L+ +   Y DALRVA+++ ND   + Q+F++  D+  + Q+ +++GR     +Y  E+      NE++GNS LS+ +L LA+DLDV++ KTPEDI+KSHL+ET    R R+ +G+   DSARANLASTFVNA VN GY  D L+TPEGN WLYKNK HGMMSAAAS+G I+LWNVEEG+ QIDK+++S +E+++AGA+L +G+VS+G+R + D ALALLSEH++S +  +R A+  GLG+AYAGS RED+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES++A+LD+  ARFL LGL L +LG+ E+ +AMLEA KT+EHKM +  A+ LET AYAGSGNVLKVQ++L  CAEH+++  +A HQSVAVLGIALIT+GE +G+EMA+RSFDHLL YGE+ +RRAVPLAFALL VSNP+Y +ID LSRLTHD D  VAQNA+LALG++  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQG LH GKGL+++ PFHSDRL+ S V ++G+LT+LHA+LDM++T+LD  HY+L+    AM PRMLITLDE+LNPLPV+VRVGQAVE VGQAGRPK+ITGFQTHTTPVLL VKDRAELA+ EYL  T
Sbjct:    2 KETAQTPVPAKDPAAKDDKSPDAVNASNPTDDAPVEEELSEEDRKLKEDLKTAVNRVCGPQEEIGVKQLALELLRREIRTATSSMTSVPKPLKFLRPSYDKLKAAYET--FQP--GETQKLMADVLAVLAMTMAKEDSRESLKFKLLGNSTDLGSWGHEFVRSLAGEVGEEYNARLTAENVVDPDVRDLLEIVDAIVPFHMQHNAEPEAIDILIEVQQLAKLLKSPDIDEKNYQRVCLYLLACADFMSDADDLVNLLNTAYALFLRLEQYPDALRVALRVGND-DFVTQVFQKCKDDVVRNQMGYILGRQ----RYFYEDESEASANEIIGNSDLSDKFLALARDLDVMEAKTPEDIYKSHLSETASVGRGRD-SGSQPADSARANLASTFVNALVNAGYGTDKLMTPEGNTWLYKNKKHGMMSAAASLGMIMLWNVEEGITQIDKYLYSGDEYVKAGAILGVGVVSAGIRNDCDPALALLSEHIDSGNCSIRCASCLGLGIAYAGSAREDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESSDAELDSSCARFLALGLGLLYLGRQERVEAMLEAAKTIEHKMSKYLAITLETCAYAGSGNVLKVQQLLRTCAEHIEDPMEAQHQSVAVLGIALITMGENIGSEMAMRSFDHLLQYGEVAVRRAVPLAFALLSVSNPEYALIDTLSRLTHDVDSGVAQNAILALGLVAAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGLLHMGKGLMTLHPFHSDRLIMSRVAVSGLLTILHASLDMEHTILDTSHYILYCIATAMQPRMLITLDEELNPLPVSVRVGQAVEIVGQAGRPKSITGFQTHTTPVLLNVKDRAELATEEYLPLT 878

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|698793476|ref|XP_009829770.1| (hypothetical protein H257_06289 [Aphanomyces astaci] >gi|574115337|gb|ETV80823.1| hypothetical protein H257_06289 [Aphanomyces astaci])

HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0
Identity = 527/891 (59.15%), Postives = 679/891 (76.21%), Query Frame = 0

Query:   19 RQAVALMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEADEISAEDQALLEGLQLAVERAQD--KDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTADAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDAD---HQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            ++AV + VP+ DP    K++  + P   P  KD    +KE +++S ED+ L E L+L+V R  D  +  GV+K+ALE LR+ IR ATSSMTSVPKPLKFLRPHY  L D +T   + P    N+  L D+LAVLAMTMA  GSRESL FKL+ N+ +LG WGHEFVRSLAGE+GEEY +R T      V+DLLA+V  IVPFH++HNA  EA+D+L+EVQ+L +LL    +D+ NYQR+CLYLL CADFM+DPDDLQ +L TAY +Y +     DALRVA++L+++   +  +F + +D   ++QL +++GR      Y+ E  +   V++ +GNS+LS+ +L LA+DLDVL+PKTPEDI+KSHL+ETG  +R R+G      DSARANLASTFVNAFVN GY  D L+T EGN WLYKNK+HGM SAAAS+G ++LWNVEEG+  IDKF++S + HI+AGA+L +GIVSSG+R E D ALALLSEH++S +  +R A+  GLG+AYAGS+R+D+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES +A+LD+  ARFL LGL L +LG+ E+ DAMLEA KT++H++ +  A+ LET AYAG+GNVLKVQ +L +CA H+ +D +   HQ  AVLGIAL+T+GE VG+EMA+R+FDHLL YGE+ +RRAVPLA AL  VSNP+Y +ID LSRLTHD D  VAQ+A+LALG++  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQGFLH GKGL+++ PFHSDRL+ S V L+G+L +LHAALDM+ T+ D  HY L+  + AM PRMLIT+DE  NPLPV+VRVGQAVE VGQAGRPK+ITGFQTH TPVLL VKDRAELA+ EY+A T
Sbjct:    3 KEAVQVQVPSEDP----KKKESLEPVHAPQ-KDNGADTKEPEDLSDEDKQLKEDLELSVTRIVDIHEQIGVKKLALETLRELIRTATSSMTSVPKPLKFLRPHYNALKDAFTT--LQPA---NQTELADILAVLAMTMAPEGSRESLHFKLKGNSTELGLWGHEFVRSLAGEVGEEYTARVTTTIDANVDDLLAIVDAIVPFHMKHNAEPEAIDILIEVQKLDRLLASPEIDDKNYQRVCLYLLACADFMSDPDDLQTLLNTAYAIYIRVDKLPDALRVALRLDSE-PLVADVFSKANDPAVRKQLGYILGRQR--FCYDDEHPEHAAVDQ-IGNSELSDKFLALARDLDVLEPKTPEDIYKSHLSETGSVTRGRDGGAP--TDSARANLASTFVNAFVNAGYGTDKLMTVEGNGWLYKNKEHGMTSAAASLGLLMLWNVEEGITAIDKFLYSGDPHIKAGAILGVGIVSSGIRNECDPALALLSEHVDSGNCSIRCASVLGLGIAYAGSSRDDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESTDAELDSSCARFLCLGLGLLYLGRQERVDAMLEAAKTIQHRISKYLAITLETCAYAGTGNVLKVQSLLRVCATHVVDDPNEGAHQLAAVLGIALVTVGESVGSEMAVRTFDHLLQYGEVNVRRAVPLALALQSVSNPEYSLIDTLSRLTHDADAGVAQSAILALGLVSAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGFLHMGKGLITLHPFHSDRLILSRVALSGLLAVLHAALDMEKTIFDNSHYFLYCIVTAMQPRMLITVDEQGNPLPVSVRVGQAVEVVGQAGRPKSITGFQTHNTPVLLNVKDRAELATDEYIALT 877

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BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|673039021|ref|XP_008873471.1| (hypothetical protein H310_09229 [Aphanomyces invadans] >gi|574470901|gb|ETV97910.1| hypothetical protein H310_09229 [Aphanomyces invadans])

HSP 1 Score: 1028.47 bits (2658), Expect = 0.000e+0
Identity = 523/886 (59.03%), Postives = 675/886 (76.19%), Query Frame = 0

Query:   24 LMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEADEISAEDQALLEGLQLAVERAQDKD--AGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTADAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDAD---HQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            + VP+ DP    K+++ + P   P  KD  D  KE +E+S ED+ L E L+++V R  D +   GV+K+AL+ LR+ IR ATSSMTSVPKPLKFLRPHY  L   YT      +   N+  L D+LAVLAMTMA  GSRESL++KL+ N+ +LG WGHEFVRSLAGE+GEEY +R T      V+DLLA+V  IVPFH+QHNA  EA+D+L+EVQ+L +LL    +DE NYQR+CLYLL CADFM+DPDDLQ +L TAY +Y +   Y DALRVA++L+++   +  +F + +D   ++QL +++GR      Y+ E  +   V++ +GN++LS+ +L LA+DLDVL+PKTPEDI+KSHL+ETG  SR R+G      DSARANLASTFVNAFVN GY  D L+T EGN WLYKNK+HGM SAAAS+G ++LWNVEEG+  IDKF++S + H++AGA+L +GIVSSG+R E D ALALLSEH++S +  +R A+  GLG+AYAGS+R+D+ ELL P+V  AD +A I EV+ AAL+LGM+ VGT + E  S+L+QRLMES +A+LD+  ARFL LGL L +LG+ E+ DAMLEA KT++H++ +   + LET AYAG+GNVLKVQ++L +CA H+ +D     HQ  AVLGIAL+T+GE +G+EMA+R+FDHLL YGE+ +RRAVPLA AL  VSNP+Y +ID LSRLTHD D  VAQ+A+LALG++  GTNNSR+AGLLRQL+EFYSREA+HLFVVR+AQGFLH GKGL+S+ PFHSDRL+ S V L+G+L +LHAALDM+ T+ D  HY L+  + AM PRMLIT+DE+  PLPV+VRVGQAVE VGQAGRPK+ITGFQTH TPVLL VKDRAELA+ EY+A T
Sbjct:    8 VQVPSDDP----KKKQSLEPVHAPQ-KDGVD-DKEPEELSEEDKQLKEDLEMSVTRILDANEQPGVKKLALQTLRELIRTATSSMTSVPKPLKFLRPHYQALKTAYTT-----LQQANQTELADILAVLAMTMAPEGSRESLQYKLKGNSTELGLWGHEFVRSLAGEVGEEYTARVTTTVDAKVDDLLAIVDAIVPFHMQHNAEPEAIDILIEVQKLDRLLASPEIDEKNYQRVCLYLLACADFMSDPDDLQTLLTTAYAIYIRVEKYPDALRVALRLDSETL-VADVFSKTNDPAVRKQLGYILGRQR--FCYDDEHPEHAVVDQ-IGNAELSDKFLALARDLDVLEPKTPEDIYKSHLSETGSISRGRDGGAP--TDSARANLASTFVNAFVNAGYGTDKLMTVEGNGWLYKNKEHGMTSAAASLGLLMLWNVEEGITAIDKFLYSGDPHVKAGAILGVGIVSSGIRNECDPALALLSEHVDSGNCSIRCASVLGLGIAYAGSSRDDVSELLIPVVSHADENADIQEVSYAALALGMVEVGTCDEEAGSVLMQRLMESTDAELDSSCARFLCLGLGLLYLGRQERVDAMLEAAKTIQHRISKYLEITLETCAYAGTGNVLKVQQLLRVCATHVVDDPKEGAHQLAAVLGIALVTVGESIGSEMAVRTFDHLLQYGEVNVRRAVPLALALQSVSNPEYSLIDTLSRLTHDADAGVAQSAILALGLVSAGTNNSRVAGLLRQLSEFYSREANHLFVVRIAQGFLHMGKGLISLHPFHSDRLILSRVALSGLLAVLHAALDMEKTIFDNSHYFLYCIVTAMQPRMLITVDEEGKPLPVSVRVGQAVEVVGQAGRPKSITGFQTHNTPVLLNVKDRAELATDEYIALT 876

[Close]

BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|1210526191|dbj|GAX15109.1| (26S proteasome regulatory subunit N1 [Fistulifera solaris])

HSP 1 Score: 1023.85 bits (2646), Expect = 0.000e+0
Identity = 535/918 (58.28%), Postives = 686/918 (74.73%), Query Frame = 0

Query:   31 PPTLEKEERGVPPKPEPDDKDKKDKSKEADE-----ISAEDQALLEGLQLAVER--AQDKDAGV----QKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKL-----LGDVLAVLAMTMATPGSRESLRFKL--------------ESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTA----DAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMAR---IHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEE---ADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLES---ASKPVRYAAAFGLGLAYAGSNREDLIELLAPLVADADAG---ITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDADHQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            P   E  E     + + D+ +KK   K+ DE     +S ED+ L E L+  V     ++ +A V    +  AL+ +  E+R+ATSSMTSVPKPLKFLRPH++ L D++ +        E + L     L DVL+VLAMTM  P  RESL+FKL              ES A +LGSWGHE+VRSLAGEIGEEY +R  A    +  +P  DLL +V  IVPFH+ HNA AEAVDLL+EVQRL  LL++ ++DE NYQRICLYL++ AD+M+DPDDL EML TAYE+YR Q  + DALRVA++    MAR   I  L +E  D  +++Q+ F++GR  VN + +  E    DA ++NE VGN K+SE +L LA+DLDV+DPKTPEDI+KSHLAETGGFSRRR+  GA  VDSARANLAST+VNAFVN G+ +D L+TP+ + WLYKNKDHGM++AAAS+G+ILLWNVE+GL QIDKF++S E++++AGA LAIGIVSSGVR E D ALALL+++LE    +S  +++AA  GLG+AYAGS RED++E+L P+V     G   + EV LA L+LGMI+VG+ +  V   +VQRLME+ E +L++  ARFL LGLAL FLGQMEKADAM+EA++TVEH + + A ++LETAAYAGSGNVLKVQ+MLH C EHL E A+HQ  AVLGI LIT+GE+VG+EMALR+FDHLLHY ELPI+RAVPL+ A L++SNPD+ +IDQLSRL+HD D ++AQNA++ALG++  GTNNSR+AGLLRQL+EFYS+EASH+F VR+AQG LH GKGL+++ PFHSD +L  G  L G+L LLH+ LD+K+T+LDK HYLL+    AMNPRMLIT+DE+++  PVTVRVGQAVETVGQAG+PK ITGFQTHTTPVLL  K+RAEL + E+L+ +
Sbjct:    3 PKDSEVVEISATTEKKGDESEKKTAGKKGDEEAKDTLSEEDRELKERLETCVSTLLNENNEAAVTVPIRLKALDMIVNELRSATSSMTSVPKPLKFLRPHFSVLKDLFNSITGESSSVETQMLGLRARLADVLSVLAMTMGKPEDRESLQFKLAGAKDYEALAQRGGESPADNLGSWGHEYVRSLAGEIGEEYAARVIAGSNPEEDEPFADLLQMVDVIVPFHVNHNAEAEAVDLLIEVQRLKNLLKIDTIDEKNYQRICLYLIKTADYMSDPDDLVEMLETAYEIYRSQHQFYDALRVALR----MARPECITDLLKECEDPLERKQMCFLLGRHRVNYEVDDSEIKDEDAWKLNEYVGNEKISEFFLKLAQDLDVMDPKTPEDIYKSHLAETGGFSRRRDIGGAQ-VDSARANLASTYVNAFVNAGFCQDKLMTPD-SEWLYKNKDHGMLAAAASLGSILLWNVEDGLTQIDKFLYSSEDYVKAGAALAIGIVSSGVRNEADPALALLAQYLEEDSDSSHVMKFAACTGLGIAYAGSAREDVMEILLPVVEGTGGGPTKVMEVCLAGLALGMIYVGSCDDNVGGTIVQRLMEATEDELNHSHARFLCLGLALLFLGQMEKADAMIEALRTVEHSISKYAVLMLETAAYAGSGNVLKVQEMLHQCTEHLTEGAEHQMAAVLGIGLITMGEDVGSEMALRTFDHLLHYCELPIKRAVPLSLAALNISNPDFTVIDQLSRLSHDPDSEIAQNAIIALGIVSAGTNNSRVAGLLRQLSEFYSKEASHVFCVRIAQGLLHMGKGLMTLNPFHSDSMLMCGPALGGMLVLLHSCLDLKSTILDKSHYLLYYLTCAMNPRMLITVDENVDIAPVTVRVGQAVETVGQAGKPKRITGFQTHTTPVLLATKERAELGTEEFLSVS 914

[Close]

BLAST of EWM27740.1 vs. NCBI_GenBank
Match: gi|1173959970|gb|OQS06142.1| (26S proteasome non-ATPase regulatory subunit 2 [Thraustotheca clavata])

HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0
Identity = 517/893 (57.89%), Postives = 671/893 (75.14%), Query Frame = 0

Query:   19 RQAVALMVPAADPPTLEKEERGVPPKPEPDDKDKKDKSKEADEISAEDQALLEGLQLAVERAQD--KDAGVQKMALEHLRKEIRAATSSMTSVPKPLKFLRPHYTTLIDVYTNAAIYPVGSENRKLLGDVLAVLAMTMATPGSRESLRFKLESNAQDLGSWGHEFVRSLAGEIGEEYVSRTTA--DAPQPVEDLLALVKDIVPFHIQHNAFAEAVDLLLEVQRLPQLLELTSVDEANYQRICLYLLRCADFMADPDDLQEMLVTAYELYRKQGSYADALRVAIKLNNDMARIHQLFEEVSDETQKRQLAFMVGRSHVNLQYEGEEADAEEVNELVGNSKLSEHYLLLAKDLDVLDPKTPEDIFKSHLAETGGFSRRREGAGAHHVDSARANLASTFVNAFVNLGYQKDALVTPEGNAWLYKNKDHGMMSAAASIGAILLWNVEEGLNQIDKFMHSQEEHIRAGALLAIGIVSSGVRIEHDAALALLSEHLESASKPVRYAAAFGLGLAYAGSNREDLIELLAPLV--ADADAGITEVALAALSLGMIFVGTTNSEVASLLVQRLMESAEADLDNPMARFLVLGLALPFLGQMEKADAMLEAVKTVEHKMGRSAAVVLETAAYAGSGNVLKVQKMLHLCAEHLQEDAD---HQSVAVLGIALITLGEEVGAEMALRSFDHLLHYGELPIRRAVPLAFALLHVSNPDYGIIDQLSRLTHDQDGQVAQNAVLALGVIGCGTNNSRIAGLLRQLAEFYSREASHLFVVRVAQGFLHAGKGLVSMTPFHSDRLLASGVGLAGILTLLHAALDMKNTVLDKHHYLLFSALVAMNPRMLITLDEDLNPLPVTVRVGQAVETVGQAGRPKTITGFQTHTTPVLLGVKDRAELASSEYLAYT 902
            + +V + VP+ DP     +E    P+ E    +  DK ++A+++S ED+ L E L+L+V R  D  + +GV+  ALE +R+ IR ATSSMTSVPKPLKFLRPHY  L + Y            +K L D+LAVLAMTMA  GSRESL +KL+ N  +LG WGHEFVRSLAGE+GEEY +R T    A   V+DLLA+V  IVPFH+QHNA  EA+D+L+EVQ+L +LLE   +D+ NYQR+CLYLL CADFM+DPDDLQ +L TAY +Y +   Y DALRVA+++ ++ + +  +F + S+   +RQ+ +++GR     + E E +     N+++ N+ LS+ +L LA+DLDV++ KTPEDI+KSHL+ETG  +R R+       DSARANLASTFVNAFVN GY  D L+T EGN WLYKNK+HGM SAAAS+G I+LWNVEEG+ QIDKF++S + HI+AGA+L +GIVSSG+R E D ALALL+EH++S +  +R A+  GLG+AYAGS+RED+ ELL P+V  AD +A I EVA AAL+LGM+ VGT + E  S+++QRLMES +A+LD+  ARFL LGL L +LG+ E+ DAMLEA KT++H++ +  ++ LET AYAG+GNVLKVQ +L +CA H  +D     +QS AVLGI L+T+GE VG+EMA+R+FDHLL YGE+ +RRAVPLA ALL +SNP+Y +ID LSRLTHD D  VAQ+A+LALG+   GTNNSR+AGLLRQL+EFYSREA+HLFV R+AQG LH GKGL+++ PFHSDRL+ S V ++GIL +LHAALDM+ T+ D  HY L+  + AM PRMLIT+DE+ NPLPV+VRVGQAVE VGQAGRPK+ITGFQTH TPVLL VKDRAELA+ EYLA+T
Sbjct:    3 KDSVTVQVPSKDPVKKASDEPVHAPQKE---LNGNDKVEDAEDLSEEDKQLKEDLELSVARICDPKEQSGVKVHALETMRQLIRTATSSMTSVPKPLKFLRPHYGVLKEAYATVT-------KQKELADILAVLAMTMAPEGSRESLSYKLQGNPTELGLWGHEFVRSLAGEVGEEYTARITGPNGANASVDDLLAMVDAIVPFHMQHNAEPEAIDILIEVQKLDKLLESKEIDDKNYQRVCLYLLACADFMSDPDDLQTLLQTAYSVYIRVEQYPDALRVALRMGSE-SHVADVFSKCSNPVTRRQMGYILGRQRFCYEDENEPS----ANDMISNTDLSDKFLALARDLDVVEAKTPEDIYKSHLSETGSVARGRDSNAP--TDSARANLASTFVNAFVNAGYGTDKLMTAEGNGWLYKNKEHGMTSAAASLGMIMLWNVEEGITQIDKFLYSGDHHIKAGAILGVGIVSSGIRNECDPALALLAEHVDSGNCSIRCASCLGLGIAYAGSSREDVSELLIPVVSHADENADIQEVAYAALALGMVEVGTCDEEAGSVIMQRLMESTDAELDSSCARFLCLGLGLLYLGRQERVDAMLEAAKTIQHRISKYLSITLETCAYAGTGNVLKVQSLLRVCATHYVDDPKEGAYQSAAVLGIGLVTMGENVGSEMAMRTFDHLLQYGEVNVRRAVPLALALLSISNPEYTLIDTLSRLTHDADAGVAQSAILALGLASAGTNNSRVAGLLRQLSEFYSREANHLFVTRIAQGLLHMGKGLITLHPFHSDRLIMSRVAMSGILAVLHAALDMEKTIFDNAHYFLYCIVTAMQPRMLITVDEEGNPLPVSVRVGQAVEVVGQAGRPKSITGFQTHNTPVLLNVKDRAELATDEYLAHT 878

The following BLAST results are available for this feature:

BLAST of EWM27740.1 vs. NCBI_GenBank

BLAST of EWM27740.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585110013\|gb\|EWM27740.1\|	0.000e+0	100.00	Armadillo-like helical [Nannochloropsis gaditana]	[more]
gi\|695373800\|ref\|XP_009515136.1\|	0.000e+0	59.89	hypothetical protein PHYSODRAFT_343670 [Phytophtho...	[more]
gi\|970635749\|gb\|KUF80575.1\|	0.000e+0	60.65	26S proteasome non-ATPase regulatory subunit 2 [Ph...	[more]
gi\|675202529\|ref\|XP_008910149.1\|	0.000e+0	60.65	hypothetical protein PPTG_14544 [Phytophthora para...	[more]
gi\|953489057\|emb\|CEG47431.1\|	0.000e+0	60.61	26s proteasome non-atpase regulatory subunit 2 [Pl...	[more]
gi\|301116906\|ref\|XP_002906181.1\|	0.000e+0	60.32	26S proteasome non-ATPase regulatory subunit 2 [Ph...	[more]
gi\|698793476\|ref\|XP_009829770.1\|	0.000e+0	59.15	hypothetical protein H257_06289 [Aphanomyces astac...	[more]
gi\|673039021\|ref\|XP_008873471.1\|	0.000e+0	59.03	hypothetical protein H310_09229 [Aphanomyces invad...	[more]
gi\|1210526191\|dbj\|GAX15109.1\|	0.000e+0	58.28	26S proteasome regulatory subunit N1 [Fistulifera ...	[more]
gi\|1173959970\|gb\|OQS06142.1\|	0.000e+0	57.89	26S proteasome non-ATPase regulatory subunit 2 [Th...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna2968	rna2968	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications