EWM27742.1, cds2950 (CDS) Nannochloropsis gaditana

Overview
NameEWM27742.1
Unique Namecds2950
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:358303..358404 -
Alignment locationCM002460.1:355204..358226 -
Alignment locationCM002460.1:354000..355047 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27742.1
ProductActin-like protein
Orig transcript idgnl|cribi|Naga_100034g22.6315.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:358303..358404 -
CM002460.1supercontigCM002460.1:355204..358226 -
CM002460.1supercontigCM002460.1:354000..355047 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin
Homology
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|585110015|gb|EWM27742.1| (Actin-like protein [Nannochloropsis gaditana])

HSP 1 Score: 2835.44 bits (7349), Expect = 0.000e+0
Identity = 1390/1390 (100.00%), Postives = 1390/1390 (100.00%), Query Frame = 0
Query:    1 MQDAQADSSDLNRRSLRSSGNPLELIELIMAICQDPRHASSTAVKRQLECIKMRTARTQHVATSEKPRCDPELEAVYENLGRLRENERRHEHVYAELKQANLALTKEKQAITIHAHTYEKKATALALQLEAAQREVAEANCAKRRHAEQVKAELLAHVNELEEVERARETALRSELATAKQESDEWRRQAETVKEEIVAMGVADRDKHEALKSVQAELLILSEEYKNLSQQIALEKKEVEAAQQECVVLREADKESRRAMKMREDTLRMELATASDEINRLKDLYKSTIDSVQRGDMSITALQKKLEEANGEVEALRAATEEQRRELMSLRRECARTKIELNNAQADASTRMTALAQDLTDAKEDANRCRSLLSATSEEVSKGQSLLEISMEETQTVRESCKDEILLLEEEVKRWKEAAERAQGEVTEKSSVLSSLHEEHYRVLAESQDSRDKASQWQKTAEAAKDRIQLLDAEMLRKESVLADTEMRIEKLAAEVRNAHDEAARFEAAAELVKGESTSRFLQLQNSLEEMRAREVTLTDELATKMEELRECQAIVEARGKEMAMQRYQATEKESETRSALDATEARVVVLEGEKKRYEKELEHWRFSAETAERKYESLLEENQNIQSSFERRIQDEFSRANILETELIATKKDLVNLKSVLESSDGQKREKEIFLEKSLAETRSIGKDLQVQLVEAEQKVFHWRESTQAAHSESNEVRSALDEARTQIATLEKDLELAQHTTIMVKSAAQPALMKAGSTDSPGQAPLYREPGVDSESSAMDLGVAPIDSEKNELGQFERKRRLYEEQEREPAFADEITVPKDKWLRLKADLDFLRDENAALQSKLKAVEGKGEAKLSEGKLLGKLQRMEWSSSSWKPPTTFPGGDPTDFFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGILNINHLEVALMGGNVEEERRIEGGETKQYLKEEKTHIPDSDEIVQNMTAVQNMTAVSRGALARAAEIISERGSWISAEVYNIDGPQAIEDPAYICTP 1390
            MQDAQADSSDLNRRSLRSSGNPLELIELIMAICQDPRHASSTAVKRQLECIKMRTARTQHVATSEKPRCDPELEAVYENLGRLRENERRHEHVYAELKQANLALTKEKQAITIHAHTYEKKATALALQLEAAQREVAEANCAKRRHAEQVKAELLAHVNELEEVERARETALRSELATAKQESDEWRRQAETVKEEIVAMGVADRDKHEALKSVQAELLILSEEYKNLSQQIALEKKEVEAAQQECVVLREADKESRRAMKMREDTLRMELATASDEINRLKDLYKSTIDSVQRGDMSITALQKKLEEANGEVEALRAATEEQRRELMSLRRECARTKIELNNAQADASTRMTALAQDLTDAKEDANRCRSLLSATSEEVSKGQSLLEISMEETQTVRESCKDEILLLEEEVKRWKEAAERAQGEVTEKSSVLSSLHEEHYRVLAESQDSRDKASQWQKTAEAAKDRIQLLDAEMLRKESVLADTEMRIEKLAAEVRNAHDEAARFEAAAELVKGESTSRFLQLQNSLEEMRAREVTLTDELATKMEELRECQAIVEARGKEMAMQRYQATEKESETRSALDATEARVVVLEGEKKRYEKELEHWRFSAETAERKYESLLEENQNIQSSFERRIQDEFSRANILETELIATKKDLVNLKSVLESSDGQKREKEIFLEKSLAETRSIGKDLQVQLVEAEQKVFHWRESTQAAHSESNEVRSALDEARTQIATLEKDLELAQHTTIMVKSAAQPALMKAGSTDSPGQAPLYREPGVDSESSAMDLGVAPIDSEKNELGQFERKRRLYEEQEREPAFADEITVPKDKWLRLKADLDFLRDENAALQSKLKAVEGKGEAKLSEGKLLGKLQRMEWSSSSWKPPTTFPGGDPTDFFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGILNINHLEVALMGGNVEEERRIEGGETKQYLKEEKTHIPDSDEIVQNMTAVQNMTAVSRGALARAAEIISERGSWISAEVYNIDGPQAIEDPAYICTP
Sbjct:    1 MQDAQADSSDLNRRSLRSSGNPLELIELIMAICQDPRHASSTAVKRQLECIKMRTARTQHVATSEKPRCDPELEAVYENLGRLRENERRHEHVYAELKQANLALTKEKQAITIHAHTYEKKATALALQLEAAQREVAEANCAKRRHAEQVKAELLAHVNELEEVERARETALRSELATAKQESDEWRRQAETVKEEIVAMGVADRDKHEALKSVQAELLILSEEYKNLSQQIALEKKEVEAAQQECVVLREADKESRRAMKMREDTLRMELATASDEINRLKDLYKSTIDSVQRGDMSITALQKKLEEANGEVEALRAATEEQRRELMSLRRECARTKIELNNAQADASTRMTALAQDLTDAKEDANRCRSLLSATSEEVSKGQSLLEISMEETQTVRESCKDEILLLEEEVKRWKEAAERAQGEVTEKSSVLSSLHEEHYRVLAESQDSRDKASQWQKTAEAAKDRIQLLDAEMLRKESVLADTEMRIEKLAAEVRNAHDEAARFEAAAELVKGESTSRFLQLQNSLEEMRAREVTLTDELATKMEELRECQAIVEARGKEMAMQRYQATEKESETRSALDATEARVVVLEGEKKRYEKELEHWRFSAETAERKYESLLEENQNIQSSFERRIQDEFSRANILETELIATKKDLVNLKSVLESSDGQKREKEIFLEKSLAETRSIGKDLQVQLVEAEQKVFHWRESTQAAHSESNEVRSALDEARTQIATLEKDLELAQHTTIMVKSAAQPALMKAGSTDSPGQAPLYREPGVDSESSAMDLGVAPIDSEKNELGQFERKRRLYEEQEREPAFADEITVPKDKWLRLKADLDFLRDENAALQSKLKAVEGKGEAKLSEGKLLGKLQRMEWSSSSWKPPTTFPGGDPTDFFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGILNINHLEVALMGGNVEEERRIEGGETKQYLKEEKTHIPDSDEIVQNMTAVQNMTAVSRGALARAAEIISERGSWISAEVYNIDGPQAIEDPAYICTP 1390          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|298705135|emb|CBJ28578.1| (TiTiN family member (ttn-1) [Ectocarpus siliculosus])

HSP 1 Score: 251.906 bits (642), Expect = 5.267e-64
Identity = 142/416 (34.13%), Postives = 220/416 (52.88%), Query Frame = 0
Query:  879 PTTFPGGDPTDFFFVEIGTWRIRAGWV----EVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDR-DRLIRPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQ--IATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLP 1287
            P     G   +   +E+G WR+RAG V    E G S S+   +FPC +ARPS+  ADL  +V  AS  A  MY +FR+ GVF+G DAWYC  DHP   LR  L+L  P  R D+     D + L  + +   +   + +P ++TYKPT+T+ E   +  +L E     ++R +NEA + +    V   + +D+GE    V PI++   +   V +   GG D+TK++ YMLLSR NE ++ + +R+ LE  R +KE   YV  DF  E   YG F+R+ + V K  +A   ++  E+      +D     E   K+ T             LK+G EL + +G ERFH  E+ F P L+ + G + S+   V+ +LA +D +    +L  +++ G S+R+ GL +R+ ++LK  LP
Sbjct: 1244 PADHGLGREGNTVVLELGAWRVRAGVVTPSGEEGKSSSYFD-DFPCCVARPSREGADLDELVNGASSLAAPMYSKFRDTGVFVGGDAWYCCLDHPSIALRSKLRLSCPMRRRDQPPSREDTERLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRVPAIRMVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQMTDRRRLEYTREMKEEQCYVPLDFALEVEEYGAFKRKAMRVCKGAQASPMLSGYEACDSRDFIDETDKDEEVTKTKTF-----------TLKSGSELDVKIGRERFHAPEILFTPGLWNEGGVSRSLSQAVLDALAELDSDTKADMLDDIVVVGGSARMDGLGDRLEEDLKAMLP 1647          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|813197545|ref|XP_012208595.1| (hypothetical protein SPRG_13925 [Saprolegnia parasitica CBS 223.65] >gi|641526340|gb|KDO20714.1| hypothetical protein SPRG_13925 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 187.578 bits (475), Expect = 3.172e-44
Identity = 118/410 (28.78%), Postives = 194/410 (47.32%), Query Frame = 0
Query:  890 FFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEV--CLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGILNIN 1297
               V  G++ + AG +   T+    T++ P ++A P   +A+L  ++Q +S           E G F+G+DA    ++HPDP LR  LK E  F    +     L+ LL  VF    +   ++   ++VT+KP      RE + ++LFE C         +A M        T L +D+G D T +VPIYE MIL+  V   ++GG  L  +M  MLLS+ ++ Y  +  R   ++AR + E+   VA DF     ++G FER  + V+      +   +  VP +              NT+     +V   + L +G  L L    ERF   EL ++PKL PD     ++ D + K+ A  D +L   LL++V+  G + +LPG   R+ +E++   P  F  ++ ++
Sbjct:  995 VVVVHFGSFELHAGLLHADTASYVPTLKLPTLVAVPQGGAAELHRVLQGSSYIGAGSVRIGYENGYFLGRDAVTFLYEHPDPALRCILKQERVFQNGHVTSTEYLEGLLHQVFTGLGIDDVISSYNVIVTHKPQLAKASRESLADVLFEKCAVKGALLATDALMSLRARGKSTGLVLDVGADATYIVPIYEDMILDHAVVVTSMGGDALVNFMVSMLLSQESDEYHKIPLRLQQKIARAMLETKGMVAKDFEAMAEKHGRFERAHVQVLPTESQPV--WQKAVPHK--------------NTAAHPLHAVYAYR-LPSGSTLELQCDVERFIAPELLWQPKLNPDNAGEMALHDALAKAFAECDSQLHHELLANVVCTGGACQLPGFKARVHQEIQKICP--FESLIAVD 1385          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|669158952|ref|XP_008615038.1| (hypothetical protein SDRG_10804 [Saprolegnia diclina VS20] >gi|530733397|gb|EQC31639.1| hypothetical protein SDRG_10804 [Saprolegnia diclina VS20])

HSP 1 Score: 184.496 bits (467), Expect = 3.118e-43
Identity = 117/409 (28.61%), Postives = 192/409 (46.94%), Query Frame = 0
Query:  890 FFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEV--CLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGILNI 1296
               V  G+  + AG +   T+    T++ P ++A P   +A+L  ++Q +S           E G F+G+DA    ++HPDP LR  LK E  F    +     L+ LL  VF    +   ++   ++VT+KP      RE + ++LFE C         +A M        T L +D+G D T +VPIYE MIL+  V T  +GG  L  +M  MLLS+ ++ Y  +  R   ++AR I E+   VA DF+    ++G FER  + V+      +   +  VP +     +   P  +    R           L +G  L +    ERF   EL ++PKL PD     ++ D + ++ A  D +L   LL++V+  G + +LPG   R+ +E++   P E   ++++
Sbjct: 1037 VVVVHFGSLELHAGLLHADTASYVPTLKLPTLVAVPQGGAAELHRVLQGSSYIGTGSVRIGYENGYFLGRDAVTFLYEHPDPALRCILKQERVFQNGHVTSTEYLEGLLHQVFTGLGIDDAISSYNVIVTHKPQLAKASREALADVLFEKCAVKGALLATDALMSLRARGKSTGLVLDVGADATYIVPIYEDMILDHAVVTMPMGGEALVAFMVSMLLSQESDEYHKIPLRLQQKIARAILETKGMVAKDFDAMAEKHGRFERAHVQVLPTESQPV--WQKAVPHK----TTAAHPLHEVYAYR-----------LPSGSTLEMHCDVERFIAPELLWQPKLNPDNACEMALHDALARAFAESDSQLHHELLANVVCTGGACQLPGFKARVHQEIQKLCPFESLIVVDV 1428          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|1173945833|gb|OQR94420.1| (hypothetical protein ACHHYP_01320 [Achlya hypogyna])

HSP 1 Score: 179.104 bits (453), Expect = 1.372e-41
Identity = 123/421 (29.22%), Postives = 191/421 (45.37%), Query Frame = 0
Query:  890 FFFVEIGTWRIRAGWVEVGTSKSF-QTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKC--EVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLP---------------PEFAG 1292
               V +G + ++AG + +G   SF   V+ P ++A P   +A+L  ++Q +S           E G F+GKDA +  ++HPDP LR  L+ E       +     L+ LL  +F     E  +    ++VT+KP     ERE +VE+LFE C A       +A M        T L +D+G D + VVPIYE MIL+  V    +GG  L ++M  MLLS+ ++ Y  +  R   ++ R + ES   VA DF+    ++G FER  + V+      +  +   V            P   S  ++           L  G  L L    ERF   EL ++PKL PD      + D +  +L++  ++L   LL++V+  G    LPG   R+T+E++   P               P FAG
Sbjct: 1033 VLVVHLGAFELQAGLL-MGDQASFVPAVKLPALVAVPQGGAAELHRVLQGSSYVGTGSVRVGYERGYFVGKDAVHFLYEHPDPALRCILRQERVVQAGHITSVDYLEALLHQLFAAIGMEDAVCNYNVIVTHKPQLPKHERERLVEVLFEKCGAKGALLATDALMSLRARGKSTGLVVDVGADASYVVPIYEDMILDHAVVVVPMGGEALVQFMVSMLLSQDSDEYHKIPSRLQTKIGRALLESKGMVAKDFDAMAEKHGRFERTSVQVLPTQSQPVWHKAVAV--------KTAHPLHVSYCTQ-----------LPAGPTLELHCDVERFVAPELLWQPKLNPDNACDVGLQDAIGMALSACAEQLHEELLANVVCTGGVCLLPGFKARLTQEIQKLYPLEPSVHVDVATKDEHPTFAG 1433          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|698821975|ref|XP_009844016.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574100918|gb|ETV66489.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 171.4 bits (433), Expect = 3.443e-39
Identity = 130/425 (30.59%), Postives = 187/425 (44.00%), Query Frame = 0
Query:  878 PPTTFPG-----GDPTDFFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTP----LVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGI 1293
            PP    G      D TD +          AG V   + +   T   P + A P     +L  ++Q +S           + G F+GKDA    +DHPDP LRG L  E  F    +      + LLK +     V     P    +V+T+KP      RE++V+ LFE  +  SV    +A M        T L +D+G DTT +VPIYE M+LE  V     G   +  +M  MLLS+  + +  +  R    +AR I +SH  VA+DF     +YG F R+ + V+              P     +  V+E    S T+   R S    Q L +G  L L    ERF C EL + P L PD    TS+   ++KSL+  D  L   L++ V+  G  + LPG  ER+ +E++ S P    G+
Sbjct: 1130 PPLMTNGVIVLHADETDMY----------AGVVNAKSQRP--TAIIPSLAAVPRGGMTELQRVLQGSSYSGSGSLRIGYDHGYFLGKDAANVLYDHPDPALRGILTEERLFQDGAIASFEHFEGLLKQML--AAVGADTNPDTYKIVMTHKPLIGKAHREKMVQSLFEAGQFQSVFLTTDAQMSLRAVAKSTGLVVDVGADTTYIVPIYEDMLLEHAVVKLPFGQDHVVNFMVSMLLSQDCDDFHMIPARVQRRIARSILDSHGLVASDFFDMTEQYGGFRRKDVHVL--------------PTPDHPLVWVKE--SPSQTTHPLRASYA--QQLPSGRTLTLEYDIERFVCPELLWNPSLDPDCACKTSLHAAILKSLSLCDPFLQEDLIARVVCCGVLTSLPGFKERLYREVQKSTPQHVVGV 1522          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|698821981|ref|XP_009844019.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574100917|gb|ETV66488.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 171.4 bits (433), Expect = 3.445e-39
Identity = 130/425 (30.59%), Postives = 187/425 (44.00%), Query Frame = 0
Query:  878 PPTTFPG-----GDPTDFFFVEIGTWRIRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTP----LVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGI 1293
            PP    G      D TD +          AG V   + +   T   P + A P     +L  ++Q +S           + G F+GKDA    +DHPDP LRG L  E  F    +      + LLK +     V     P    +V+T+KP      RE++V+ LFE  +  SV    +A M        T L +D+G DTT +VPIYE M+LE  V     G   +  +M  MLLS+  + +  +  R    +AR I +SH  VA+DF     +YG F R+ + V+              P     +  V+E    S T+   R S    Q L +G  L L    ERF C EL + P L PD    TS+   ++KSL+  D  L   L++ V+  G  + LPG  ER+ +E++ S P    G+
Sbjct: 1131 PPLMTNGVIVLHADETDMY----------AGVVNAKSQRP--TAIIPSLAAVPRGGMTELQRVLQGSSYSGSGSLRIGYDHGYFLGKDAANVLYDHPDPALRGILTEERLFQDGAIASFEHFEGLLKQML--AAVGADTNPDTYKIVMTHKPLIGKAHREKMVQSLFEAGQFQSVFLTTDAQMSLRAVAKSTGLVVDVGADTTYIVPIYEDMLLEHAVVKLPFGQDHVVNFMVSMLLSQDCDDFHMIPARVQRRIARSILDSHGLVASDFFDMTEQYGGFRRKDVHVL--------------PTPDHPLVWVKE--SPSQTTHPLRASYA--QQLPSGRTLTLEYDIERFVCPELLWNPSLDPDCACKTSLHAAILKSLSLCDPFLQEDLIARVVCCGVLTSLPGFKERLYREVQKSTPQHVVGV 1523          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|698821983|ref|XP_009844020.1| (hypothetical protein H257_17064 [Aphanomyces astaci] >gi|574100916|gb|ETV66487.1| hypothetical protein H257_17064 [Aphanomyces astaci])

HSP 1 Score: 160.229 bits (404), Expect = 1.032e-35
Identity = 124/417 (29.74%), Postives = 181/417 (43.41%), Query Frame = 0
Query:  900 IRAGWVEVGTSKSFQTVEFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTP----LVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFP-------------------DIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLPPEFAGI 1293
            + AG V   + +   T   P + A P     +L  ++Q +S           + G F+GKDA    +DHPDP LRG L  E  F    +      + LLK +     V     P    +V+T+KP      RE++V+ LFE  +  SV    +A M        T L +D+G DTT +VPIYE M+LE  V     G   +  +M  MLLS+  + +  +  R    +AR I +SH  VA+DF     +YG F R+ + V+              P     +  V+E    S T+   R S    Q L +G  L L    ERF C EL + P L P                   D    TS+   ++KSL+  D  L   L++ V+  G  + LPG  ER+ +E++ S P    G+
Sbjct: 1148 MYAGVVNAKSQRP--TAIIPSLAAVPRGGMTELQRVLQGSSYSGSGSLRIGYDHGYFLGKDAANVLYDHPDPALRGILTEERLFQDGAIASFEHFEGLLKQML--AAVGADTNPDTYKIVMTHKPLIGKAHREKMVQSLFEAGQFQSVFLTTDAQMSLRAVAKSTGLVVDVGADTTYIVPIYEDMLLEHAVVKLPFGQDHVVNFMVSMLLSQDCDDFHMIPARVQRRIARSILDSHGLVASDFFDMTEQYGGFRRKDVHVL--------------PTPDHPLVWVKE--SPSQTTHPLRASYA--QQLPSGRTLTLEYDIERFVCPELLWNPSLDPGRHTNINKYPSHWTMHPHADCACKTSLHAAILKSLSLCDPFLQEDLIARVVCCGVLTSLPGFKERLYREVQKSTPQHVVGV 1542          
BLAST of EWM27742.1 vs. NCBI_GenBank
Match: gi|673032932|ref|XP_008870427.1| (hypothetical protein H310_06954 [Aphanomyces invadans] >gi|574474427|gb|ETW01429.1| hypothetical protein H310_06954 [Aphanomyces invadans])

HSP 1 Score: 154.066 bits (388), Expect = 8.475e-34
Identity = 108/373 (28.95%), Postives = 169/373 (45.31%), Query Frame = 0
Query:  918 FPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRLIRPADLKLLLKYVFEKCEVCLTKTP----LVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSL 1286
             P + A P     +L  ++Q +S           + G F+GKDA    +DHPDP LRG +K E  F +  +      + +LK     C V     P    LV+T+KP     +RE++V  LFE  +   V    +A M        T L +D+G D T +VPI+E M++E  V     G   L  +M  MLLS+  E +  +  R    +AR I  S+  VA DF     +YG F R+ + V+                  LD   V   D   ++ +    +   +Q L +G  L ++   ERF C EL + P L PD    T +   ++KS++  D+ L   L++ V+  G    LPG  +R++ E++ ++
Sbjct: 1198 LPALAAVPRGGIEELHRVLQGSSYIGTGSLRAGYDNGYFLGKDATNVLYDHPDPALRGIMKEERIFSKGAIASFVYFEGILKQAL-AC-VGAESHPDAFKLVMTHKPLIDKGQREKIVHSLFESGQLQGVFLTTDAQMSLRAVGKATGLIVDVGADATYIVPIFEDMVMEHAVLKVKFGEDQLVNFMVSMLLSQDCEDFHKIPLRSQRRMARTILASNGLVAMDFFDMTEKYGGFRRKDVHVLP----------------TLDHPFVWVKDTPPSSEQHPLHATYSQQ-LPSGNVLSMAYDIERFICPELLWTPSLDPDCTCDTPLHAAILKSISLCDEFLQSDLIAQVVCCGSVCALPGFKDRLSHEIQKAI 1551          
The following BLAST results are available for this feature:
BLAST of EWM27742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 9
Match NameE-valueIdentityDescription
gi|585110015|gb|EWM27742.1|0.000e+0100.00Actin-like protein [Nannochloropsis gaditana][more]
gi|298705135|emb|CBJ28578.1|5.267e-6434.13TiTiN family member (ttn-1) [Ectocarpus siliculosu... [more]
gi|813197545|ref|XP_012208595.1|3.172e-4428.78hypothetical protein SPRG_13925 [Saprolegnia paras... [more]
gi|669158952|ref|XP_008615038.1|3.118e-4328.61hypothetical protein SDRG_10804 [Saprolegnia dicli... [more]
gi|1173945833|gb|OQR94420.1|1.372e-4129.22hypothetical protein ACHHYP_01320 [Achlya hypogyna... [more]
gi|698821975|ref|XP_009844016.1|3.443e-3930.59hypothetical protein, variant 2 [Aphanomyces astac... [more]
gi|698821981|ref|XP_009844019.1|3.445e-3930.59hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|698821983|ref|XP_009844020.1|1.032e-3529.74hypothetical protein H257_17064 [Aphanomyces astac... [more]
gi|673032932|ref|XP_008870427.1|8.475e-3428.95hypothetical protein H310_06954 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2958rna2958Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications