EWM27758.1, cds2921 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27758.1 vs. NCBI_GenBank
Match: gi|585110034|gb|EWM27758.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 1017.68 bits (2630), Expect = 0.000e+0 Identity = 496/496 (100.00%), Postives = 496/496 (100.00%), Query Frame = 0 Query: 1 MEDIHISRPKAYRLASQYSDSSNGSSNVQTAVTSTEDRLEDRRRQSLRVMAAMSLNKSYSDAINGVSINKSDLEHEEDCTSKLQEIFIRAKESGMTYDDIFKKFCLKHEVTSTISSKAFVAALRKLSPDIFCLTETDVGLLVRKFEVNEDKVVSLDELKTFALAIPHVSWKVERIRRLSSALSLSDSTNRSDSGRASDSTVTRQPAPRKAASRRSLRQAVSFSRQTTFPKPLFSEKRKKQDTKTFSSTSISPILPSTASIASTRVDDRSFSPECCRSDYEGSQREQPRITSHFTIEKPTIALSLLSTTSKLMWREQEHLILRLYGHDDPPRIIAVTAKSKGTGKNYPAIYLDRDKIPLNRKAIEALADALPSDAGAHGQSIDALTSLQRAEREYLAQYVVQRLALEDVSRESGRETAKRMCIVRQTGDPWEKLAVEKPKLIKSPRSSPEMRLRPAMDFHHTSLEVKNMNYETKRQSNVAKFYSNLSKTELKDVPST 496 MEDIHISRPKAYRLASQYSDSSNGSSNVQTAVTSTEDRLEDRRRQSLRVMAAMSLNKSYSDAINGVSINKSDLEHEEDCTSKLQEIFIRAKESGMTYDDIFKKFCLKHEVTSTISSKAFVAALRKLSPDIFCLTETDVGLLVRKFEVNEDKVVSLDELKTFALAIPHVSWKVERIRRLSSALSLSDSTNRSDSGRASDSTVTRQPAPRKAASRRSLRQAVSFSRQTTFPKPLFSEKRKKQDTKTFSSTSISPILPSTASIASTRVDDRSFSPECCRSDYEGSQREQPRITSHFTIEKPTIALSLLSTTSKLMWREQEHLILRLYGHDDPPRIIAVTAKSKGTGKNYPAIYLDRDKIPLNRKAIEALADALPSDAGAHGQSIDALTSLQRAEREYLAQYVVQRLALEDVSRESGRETAKRMCIVRQTGDPWEKLAVEKPKLIKSPRSSPEMRLRPAMDFHHTSLEVKNMNYETKRQSNVAKFYSNLSKTELKDVPST Sbjct: 1 MEDIHISRPKAYRLASQYSDSSNGSSNVQTAVTSTEDRLEDRRRQSLRVMAAMSLNKSYSDAINGVSINKSDLEHEEDCTSKLQEIFIRAKESGMTYDDIFKKFCLKHEVTSTISSKAFVAALRKLSPDIFCLTETDVGLLVRKFEVNEDKVVSLDELKTFALAIPHVSWKVERIRRLSSALSLSDSTNRSDSGRASDSTVTRQPAPRKAASRRSLRQAVSFSRQTTFPKPLFSEKRKKQDTKTFSSTSISPILPSTASIASTRVDDRSFSPECCRSDYEGSQREQPRITSHFTIEKPTIALSLLSTTSKLMWREQEHLILRLYGHDDPPRIIAVTAKSKGTGKNYPAIYLDRDKIPLNRKAIEALADALPSDAGAHGQSIDALTSLQRAEREYLAQYVVQRLALEDVSRESGRETAKRMCIVRQTGDPWEKLAVEKPKLIKSPRSSPEMRLRPAMDFHHTSLEVKNMNYETKRQSNVAKFYSNLSKTELKDVPST 496
BLAST of EWM27758.1 vs. NCBI_GenBank
Match: gi|553186917|ref|XP_005854515.1| (hypothetical protein NGA_0160302 [Nannochloropsis gaditana CCMP526] >gi|553190630|ref|XP_005855231.1| hypothetical protein NGA_0160301 [Nannochloropsis gaditana CCMP526] >gi|422293833|gb|EKU21133.1| hypothetical protein NGA_0160301 [Nannochloropsis gaditana CCMP526] >gi|422294542|gb|EKU21842.1| hypothetical protein NGA_0160302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 388.652 bits (997), Expect = 7.056e-132 Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0 Query: 312 MWREQEHLILRLYGHDDPPRIIAVTAKSKGTGKNYPAIYLDRDKIPLNRKAIEALADALPSDAGAHGQSIDALTSLQRAEREYLAQYVVQRLALEDVSRESGRETAKRMCIVRQTGDPWEKLAVEKPKLIKSPRSSPEMRLRPAMDFHHTSLEVKNMNYETKRQSNVAKFYSNLSKTELKDVPST 496 MWREQEHLILRLYGHDDPPRIIAVTAKSKGTGKNYPAIYLDRDKIPLNRKAIEALADALPSDAGAHGQSIDALTSLQRAEREYLAQYVVQRLALEDVSRESGRETAKRMCIVRQTGDPWEKLAVEKPKLIKSPRSSPEMRLRPAMDFHHTSLEVKNMNYETKR SNVAKFYSNLSKTELKDVPST Sbjct: 1 MWREQEHLILRLYGHDDPPRIIAVTAKSKGTGKNYPAIYLDRDKIPLNRKAIEALADALPSDAGAHGQSIDALTSLQRAEREYLAQYVVQRLALEDVSRESGRETAKRMCIVRQTGDPWEKLAVEKPKLIKSPRSSPEMRLRPAMDFHHTSLEVKNMNYETKRHSNVAKFYSNLSKTELKDVPST 185
BLAST of EWM27758.1 vs. NCBI_GenBank
Match: gi|299473439|emb|CBN77836.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 73.1738 bits (178), Expect = 2.429e-10 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 0 Query: 82 KLQEIFIRAKESGMTYDDIFKKFCLKHEVTSTISSKAFVAALRKLSPDIFCLTETDVGLLVRKFEVNEDKVVSLDELKTFALAIPHVSWKVERIRRLSSALS 183 KLQ + +AKE GM+ + +F+ F E ++++ F +ALRKL F L E ++ LV F+ + + V LDE TF L+IP + W+ E+ RRL++A S Sbjct: 113 KLQVLLTKAKERGMSAERLFEHFAPGGE--ASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRLNNAES 212 The following BLAST results are available for this feature:
BLAST of EWM27758.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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