EWM27769.1, cds2904 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|585110051|gb|EWM27769.1| (pab-dependent poly -specific ribonuclease subunit 3, partial [Nannochloropsis gaditana]) HSP 1 Score: 1323.53 bits (3424), Expect = 0.000e+0 Identity = 656/656 (100.00%), Postives = 656/656 (100.00%), Query Frame = 0
Query: 1 MLPGRAFQPPGREQEQEQSGPSLPPRNPWQLQQQNYESISGHGPATAEQRPPVGLPGVDVGGRQDQPPPTPSAVPSRPTISTPGLSLSSSYSFQGQQAQHGQSQQQSEDRQPPSVLRYAVNAPHFVPKASTESPALGANASPSLPAQASFGNLRSTAMSFEPSAASNRLDMGAVPFVPGGGGGGIGRSRSSAGDLEILRVSSSASVDGLNTQAMPFEPGGSRGGGGATAGLPYGGEAEEDDLGDSLVNPLHHYGDEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFKVRGGGEGQILWDAWGTHVDPVFTSVFLPPLFPPS 656
MLPGRAFQPPGREQEQEQSGPSLPPRNPWQLQQQNYESISGHGPATAEQRPPVGLPGVDVGGRQDQPPPTPSAVPSRPTISTPGLSLSSSYSFQGQQAQHGQSQQQSEDRQPPSVLRYAVNAPHFVPKASTESPALGANASPSLPAQASFGNLRSTAMSFEPSAASNRLDMGAVPFVPGGGGGGIGRSRSSAGDLEILRVSSSASVDGLNTQAMPFEPGGSRGGGGATAGLPYGGEAEEDDLGDSLVNPLHHYGDEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFKVRGGGEGQILWDAWGTHVDPVFTSVFLPPLFPPS
Sbjct: 1 MLPGRAFQPPGREQEQEQSGPSLPPRNPWQLQQQNYESISGHGPATAEQRPPVGLPGVDVGGRQDQPPPTPSAVPSRPTISTPGLSLSSSYSFQGQQAQHGQSQQQSEDRQPPSVLRYAVNAPHFVPKASTESPALGANASPSLPAQASFGNLRSTAMSFEPSAASNRLDMGAVPFVPGGGGGGIGRSRSSAGDLEILRVSSSASVDGLNTQAMPFEPGGSRGGGGATAGLPYGGEAEEDDLGDSLVNPLHHYGDEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFKVRGGGEGQILWDAWGTHVDPVFTSVFLPPLFPPS 656
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|553188307|ref|XP_005854773.1| (PAB-dependent poly(A)-specific ribonuclease subunit 3 [Nannochloropsis gaditana CCMP526] >gi|422294289|gb|EKU21589.1| PAB-dependent poly(A)-specific ribonuclease subunit 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1255.35 bits (3247), Expect = 0.000e+0 Identity = 622/624 (99.68%), Postives = 623/624 (99.84%), Query Frame = 0
Query: 1 MLPGRAFQPPGREQEQEQSGPSLPPRNPWQLQQQNYESISGHGPATAEQRPPVGLPGVDVGGRQDQPPPTPSAVPSRPTISTPGLSLSSSYSFQGQQAQHGQSQQQSEDRQPPSVLRYAVNAPHFVPKASTESPALGANASPSLPAQASFGNLRSTAMSFEPSAASNRLDMGAVPFVPGGGGGGIGRSRSSAGDLEILRVSSSASVDGLNTQAMPFEPGGSRGGGGATAGLPYGGEAEEDDLGDSLVNPLHHYGDEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFKVR 624
MLPGRAFQPPGREQEQEQSGPSLPPRNPWQLQQQNYESISGHGPATAEQRPPVGLPGVDVGGRQDQPPPTPSAVPSRPTISTPGLSLSSSYSFQGQQAQHGQSQQQSEDRQPPSVLRYAVNAPHFVPKASTESPALGANASPSLPAQASFGNLRSTAMSFEPSAASNRLDMGAVPFVPGGGGGGIGRSRSSAGDLEILRVSSSASVDGLNTQAMPFEPGGSRGGGGATAGLPYGGEAEEDDLGDSLVNPLHHYGDEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK +
Sbjct: 1 MLPGRAFQPPGREQEQEQSGPSLPPRNPWQLQQQNYESISGHGPATAEQRPPVGLPGVDVGGRQDQPPPTPSAVPSRPTISTPGLSLSSSYSFQGQQAQHGQSQQQSEDRQPPSVLRYAVNAPHFVPKASTESPALGANASPSLPAQASFGNLRSTAMSFEPSAASNRLDMGAVPFVPGGGGGGIGRSRSSAGDLEILRVSSSASVDGLNTQAMPFEPGGSRGGGGATAGLPYGGEAEEDDLGDSLVNPLHHYGDEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFKTK 624
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|299473543|emb|CBN77938.1| (Poly(A) ribonuclease subunit [Ectocarpus siliculosus]) HSP 1 Score: 288.886 bits (738), Expect = 1.254e-84 Identity = 182/385 (47.27%), Postives = 240/385 (62.34%), Query Frame = 0
Query: 244 DSLVNPLHHYG--DEIFDWSFGGSSLPAPPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRI-QHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVT-TGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQSLGAALAQVRQQYSPELHALSLQLCSK--PGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
D LV P YG +E F W+ G ++L AP R T+ VPEQL F L R LPPDD R KEIPP F+ A+PLDDA K RGTAG+FGYPS TYKV+ H +G+ +ALRRFD+ R+T KIVA E W + +HP I + + F+ H NALFF+ ++HPGA+++++R++ G L E LLW V QL+ A+RA HAA AA R +HP+ VL G R+R+ G +DVLE ETRK ++ELQ +D+ LG LIL LA R T S G +LA Q Y+PELH L+ L SK P SVFE+ + + +D ++ A L+GHL+ EY++GRL RL LKL + R + +G W+ETG RYILKLF+
Sbjct: 120 DELVGP-EAYGPQEEGFLWAAGSAALAAPQRRTMHSTAVPEQLWAEFQNHSLSVLRQLPPDDERLKEIPPQFYAAFPLDDASKTRGTAGSFGYPSETYKVIQHHNGQAFALRRFDTARTTAKIVAMGTEIWLSMPEHPAITRPREAFL-HRNALFFVSDFHPGAETLSERFIQRQGG-------LLSEGLLWRLVCQLLGALRATHAAGAALRNVHPSRVLYCLVGDRVRVNWVGCLDVLEYETRKQVSELQRQDMVDLGSLILALACRHPVTVASRGESLAFTAQHYTPELHNLAASLVSKKPP---SVFEVCVATAHHTMDAMENTLMANGALQGHLASEYDNGRLLRLLLKLGTLNERPD--QGGVGEWSETGERYILKLFR 490
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|288559132|sp|P0CD65.1|PAN3_DICDI (RecName: Full=PAB-dependent poly(A)-specific ribonuclease subunit PAN3; AltName: Full=PAB1P-dependent poly(A)-nuclease; AltName: Full=PAN deadenylation complex subunit 3) HSP 1 Score: 254.218 bits (648), Expect = 5.190e-71 Identity = 140/364 (38.46%), Postives = 208/364 (57.14%), Query Frame = 0
Query: 270 PPRMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPP---GFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQH----GNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTL--PTPQSLGAALAQVRQQYSPELHALSLQLCSKP--GLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
P R + + E L+Q L + +L P+DPR K IPP +H YPLD FGY + YK +S DG YA+RR + R + + A ETWR IQHPNI+ L ++F+ ++LFF +E+ PG++++ +Y+ S P L E +LWSF+ Q+ SA++ +H+A CR++HP+ +L+T R+R+ G+ DV+ +T + LA+ Q EDL + GRLILTLA R+ T +L ++ V QYS EL+ L + L +KP L ++ E+V ++S L E + + DDLE LS EYE+GRLFRL KL + R + DP W+ETG RY++KLF+
Sbjct: 321 PGRRNIGSFFMSESLKQDILNQKSLLYLTLDPNDPRIKNIPPMLNKYHSLYPLDHDASRENQGKMFGYITSVYKAISTLDGLPYAIRRVEGFRLSSEYALQAAETWRNIQHPNIVSLKEIFVSKEFGDNSSLFFTYEFFPGSETLESKYLSQS-----GNP--LSESVLWSFICQITSALKTIHSAGLVCRVIHPSKILLTGKNRIRMNGVGIFDVVNFDTPRILAQYQHEDLLLFGRLILTLACRSAQSTTTTNLSKSIEYVSNQYSKELYNLIVYLLTKPVINLPNIDEVVLMISGRLLQENNYLHTYTDDLETELSKEYENGRLFRLVTKLGFINER--PLYDMDPRWSETGDRYLIKLFR 675
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|1173958516|gb|OQS04864.1| (hypothetical protein THRCLA_02937, partial [Thraustotheca clavata]) HSP 1 Score: 246.899 bits (629), Expect = 4.274e-70 Identity = 144/374 (38.50%), Postives = 214/374 (57.22%), Query Frame = 0
Query: 260 WSFGGSSLPAPPRMTLQR----MGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLDDAQKA----RGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKT--LAELQTEDLAMLGRLILTLATRTLPTP-QSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
++ S P+ P +T++R M + LR+ + D R + P D RYKEIP FH +PLD R AG+FGYP+ YKV+S DGR YALRR ++VR+TP I A+E W+++ HPN++ L + FI HG ALFFL EY+ AQS+ ++V S S E LWS +TQL A+RA+H AC++++ +L+T+ R+R+ GV+DVLE +T K+ + LQ ED+A +G+++L++ R TP ++ L Q Q YS L + L +V L + + ++ELD Q + D+LE L+ EY++GR+ L LKL + R E D +W+ETG RY+LKLF+
Sbjct: 81 YAASASLTPSSPIVTMRRSLASMALAPTLRRQLDAEHEDMLRQVHPSDERYKEIPSQFHCMWPLDAQDDGNLFHRNVAGSFGYPTHCYKVISETDGRTYALRRVENVRTTPGITQQAVEKWKKVNHPNVVPLHRAFISHG-ALFFLSEYYANAQSLYSKFVQGSDSAS--------ETFLWSVLTQLCGALRAIHGQNIACQVVNTRRLLLTSHNRVRISGTGVLDVLEYDTSKSKRVESLQQEDIANVGKVVLSIGCRHDITPATNISDLLGQFAQSYSANLFEIVKSLVQNE-CTTVQSLGIAVHDHTMNELDNQLSLTDELESQLACEYQNGRMLLLMLKLGLINERPEF--NMDSSWSETGDRYLLKLFR 442
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|831761171|ref|XP_012750175.1| (hypothetical protein SAMD00019534_100820 [Acytostelium subglobosum LB1] >gi|735850807|dbj|GAM26907.1| hypothetical protein SAMD00019534_100820 [Acytostelium subglobosum LB1]) HSP 1 Score: 247.284 bits (630), Expect = 4.582e-69 Identity = 137/360 (38.06%), Postives = 212/360 (58.89%), Query Frame = 0
Query: 275 LQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPP---GFHHAYPLDDAQKARGTAGA-FGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQH----GNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRTLPTPQ--SLGAALAQVRQQYSPELHALSLQLCSKP--GLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
L + + LRQ L + L + +L P+DPR + IPP +H YPLD ++ AR G FGYP+ YK +S DG Y +RR + R + + A ++WR IQHPNI+ L ++F+ N+LFF +EYHPG++++ +Y+ SGA S E +LWSF+ Q+VSA++AVH+A CR++HP+ +L+T R+R+ G+ DV+ ++ K +A+L EDL + GRLIL+LA ++ + +L + + QYS E L + L +KP L ++ +++ L+ + E ++ DDLE L+ E E+GRLFRL KL + R + E D W+ETG RY+LKLF+
Sbjct: 240 LSSFFMSDTLRQDLLKQKLMQYTTLDPNDPRLESIPPMLHKYHSLYPLD-SETARDKVGVMFGYPTSVYKAISTTDGLPYVIRRVEGFRLSNEFTLQAADSWRTIQHPNIVSLKEIFVSKEFGDNNSLFFSYEYHPGSETLETKYL----TQSGANIS---ESILWSFICQIVSALKAVHSAGLVCRVIHPSKILLTGKNRIRINGVGIFDVVNFDSPKNVAQLHHEDLVLFGRLILSLACKSAMSANNTNLNKWIDFTQSQYSKEFTNLLIFLLTKPTVNLPTIDDVIQLIGPRLVQENAYLHSYTDDLETELTKEIENGRLFRLLAKLGFINERP-SFEAVDSKWSETGDRYLLKLFR 590
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|676397233|ref|XP_009041894.1| (hypothetical protein AURANDRAFT_72726 [Aureococcus anophagefferens] >gi|323447505|gb|EGB03423.1| hypothetical protein AURANDRAFT_72726 [Aureococcus anophagefferens]) HSP 1 Score: 241.891 bits (616), Expect = 6.809e-68 Identity = 153/368 (41.58%), Postives = 207/368 (56.25%), Query Frame = 0
Query: 278 MGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLD-DAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQA-------ACRMLHPNHVLVTTGARLRLGCAGVVDVLESETR--------KTLAELQTEDLAMLGRLILTLATRTLP----TPQSLGA----ALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLF 621
+GVPE LR + D R L PDD RY EIPP + A+PLD D + R AG+FGYPSV YKV+ G YALRR D R++PK + WR ++H N+I L + F+ H A +FLHEY P A+S+ + Y +G PS +PE LWS++ QL++A+R +HA ACR L + +LVT R+RLG GVVDVLE++ R KT AE+ +D+ LG ++L LATR L TPQ+ A A + + YS E++AL +L +KP +VF L +LS A DELD Y D EG S E +GRL R+ L ++ +E G W+E+G RY+L LF
Sbjct: 134 LGVPENLRHHVESQSHDMLRQLEPDDERYLEIPPEYGAAWPLDFDERTTRNIAGSFGYPSVMYKVIDRRSGAPYALRRVDGARASPKAASATQTRWRSVRHANLIPLKRAFV-HSGATYFLHEYCPCARSLLEIYFPPCSDSTGM-PS-VPESTLWSYLLQLLAALRVIHATTGNDTIGSQACRTLGLSRILVTGNTRIRLGNVGVVDVLEADMRNNPCAGKSKTAAEI--DDVIALGHVMLALATRALSDGSCTPQNELARYQYAYYKGTRVYSREIYALISELLTKPP--TVFALCDMLSGRAFDELDATYQCVDCYEGLASAEVGAGRLLRVMLHVSSALYGSEKQAGS--VWSESGERYLLLLF 492
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|470246952|ref|XP_004366629.1| (hypothetical protein DFA_04221 [Dictyostelium fasciculatum] >gi|328870350|gb|EGG18725.1| hypothetical protein DFA_04221 [Dictyostelium fasciculatum]) HSP 1 Score: 242.662 bits (618), Expect = 2.140e-67 Identity = 132/364 (36.26%), Postives = 205/364 (56.32%), Query Frame = 0
Query: 272 RMTLQRMGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPP---GFHHAYPLDDAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQH----GNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKTLAELQTEDLAMLGRLILTLATRT--LPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLL----SVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
R L + E LRQ L + +L P+DPR K IPP +H YPLD FGYP+ YK +S DG YA+RR + R + + A +TWR IQHP+I+ L ++F+ +++FF +E+HPG++++ +Y+ + G G L E +LWSF+ QL SA++ +H+ CR++HP+ +L+T R+R+ G+ DV+ +T + LA+ Q EDL + GRL+L+LA R+ T +L ++ + QYS E L + L SKP ++ ++V +++ L E ++ D+LE L+ E E+GRLFRL +KL + R DP W+ETG RY+LKLF+
Sbjct: 241 RRYLNSFFMSESLRQDLLKQKSLLYATLDPNDPRMKNIPPILHKYHSLYPLDSETSRDKVGMMFGYPTSVYKAISTNDGYPYAIRRVEGFRLSSEFALQAADTWRNIQHPSIVSLKEIFVSKEFGDNSSIFFTYEFHPGSETLESKYL-TQNGSGGI----LNEAVLWSFICQLTSALKLIHSNGLVCRVIHPSKILLTGKNRIRINGVGIFDVVNFDTPRNLAQFQHEDLVIFGRLLLSLACRSAVASTNNNLSKSIEFISSQYSKEFKNLVIFLLSKPQPNMPPPTIDDIVSMIAPRLLQENTYLHSYTDELETELTKEIENGRLFRLMVKLGYINERPSF--DLDPRWSETGDRYLLKLFR 597
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|1173933611|gb|OQR85276.1| (hypothetical protein ACHHYP_12005 [Achlya hypogyna]) HSP 1 Score: 234.958 bits (598), Expect = 1.191e-65 Identity = 145/372 (38.98%), Postives = 213/372 (57.26%), Query Frame = 0
Query: 260 WSFGGSSLPAPPRMTLQR----MGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLD--DAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKT--LAELQTEDLAMLGRLILTLAT-RTLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
++ S P+ P +T +R M + +R+ + D R + P D RYKEIP FH +PLD D R AG+FGYP+ YKV+S DGR YALRR ++VR+TP I A++ W+R+ H +I+ L + F+ HG ALFFL E++P A S+ +++ S E LWS + QL A+RA H A AC+++H +L+T R+RL GV+DVLE +T K+ + LQ ED+A +G+++L++ + + L LAQ + YS EL A+ L + + +V EL L + ELD QY+ AD+LE LS EY++GR+ L LKL + R + D +W ETG RY+LKLF+
Sbjct: 81 YAASASVTPSSPIVTTRRSLASMALAPTIRRQLDAEHEDMLRQVHPSDERYKEIPSQFHCMWPLDAKDDLFHRNVAGSFGYPTHCYKVISETDGRTYALRRVENVRTTPAITQQAVDKWKRVVHSSIVPLHRAFVSHG-ALFFLSEFYPTAVSLHTKFLVEQASAS--------EAFLWSLLVQLSGALRAAHRADLACQVVHARRLLITGHNRVRLSGTGVLDVLEYDTSKSKRVEALQQEDVANVGKVVLSIGVHQEISAATPLVDLLAQFEKAYSAELTAVVRALVLQE-IKTVKELAVELLDHTQTELDAQYSLADELEAQLSAEYQNGRMLLLMLKLGLINERPDF--NLDSSWAETGDRYLLKLFR 440
BLAST of EWM27769.1 vs. NCBI_GenBank
Match: gi|669167254|ref|XP_008619189.1| (hypothetical protein SDRG_14812 [Saprolegnia diclina VS20] >gi|530729128|gb|EQC27370.1| hypothetical protein SDRG_14812 [Saprolegnia diclina VS20]) HSP 1 Score: 235.728 bits (600), Expect = 1.699e-65 Identity = 144/372 (38.71%), Postives = 210/372 (56.45%), Query Frame = 0
Query: 260 WSFGGSSLPAPPRMTLQR----MGVPEQLRQFFLLKDLDKGRSLPPDDPRYKEIPPGFHHAYPLD--DAQKARGTAGAFGYPSVTYKVLSHEDGRVYALRRFDSVRSTPKIVAGALETWRRIQHPNIIQLSKVFIQHGNALFFLHEYHPGAQSVTQRYVDSSRGHSGARPSRLPEKLLWSFVTQLVSAIRAVHAAQAACRMLHPNHVLVTTGARLRLGCAGVVDVLESETRKT--LAELQTEDLAMLGRLILTLATR-TLPTPQSLGAALAQVRQQYSPELHALSLQLCSKPGLLSVFELVPLLSRYALDELDRQYAAADDLEGHLSHEYESGRLFRLSLKLAQVTGRAEAMEGQDPAWNETGTRYILKLFK 622
++ S +P+ P +T +R M + +R+ + D R + P D RYKEIP FH +PLD D R AG+FGYPS YKV+S DGR YALRR ++VR+TP I A++ W+++ H N++ L + F+ HG ALFFL EY+P A S+ +Y S + E LWS +TQ+ A+RA+H AC+ + +LVT R+R+ GV+DVLE +T K+ + LQ +DL LG+++L+L R + ++ LAQ +S EL A+ L + S +L +L ELD QY+ AD+LE LS EY++GR+ L LKL + R + D +W ETG RY+LKLF+
Sbjct: 129 YAASASVIPSSPIVTTRRSLASMALAPTVRRQLDAEHEDMLRQVHPSDERYKEIPSQFHCMWPLDVQDDALHRNVAGSFGYPSHCYKVISETDGRTYALRRVENVRTTPGITQQAVDKWKKVVHANVVPLHRAFVSHG-ALFFLSEYYPTATSLHAKYFGSQASSVAS------EAFLWSLLTQVTGALRAIHRHDMACQAIALRRLLVTGHNRVRISGTGVLDVLEYDTSKSKRVEALQQDDLVNLGKVVLSLGVRQEMSATSNVSDLLAQFATTFSDELTAVVRGLTLQ-STTSANDLALMLFDRTQAELDTQYSLADELEAQLSSEYQNGRMLLLMLKLGLINERPDF--NLDSSWAETGDRYLLKLFR 490 The following BLAST results are available for this feature:
BLAST of EWM27769.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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