EWM27794.1, cds2882 (CDS) Nannochloropsis gaditana

Overview
NameEWM27794.1
Unique Namecds2882
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:181681..181784 +
Alignment locationCM002460.1:181989..182542 +
Alignment locationCM002460.1:182708..183129 +
Alignment locationCM002460.1:183245..183868 +

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Properties
Property NameValue
Protein idEWM27794.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100324g1.675.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:181681..181784 +
CM002460.1supercontigCM002460.1:181989..182542 +
CM002460.1supercontigCM002460.1:182708..183129 +
CM002460.1supercontigCM002460.1:183245..183868 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27794.1 vs. NCBI_GenBank
Match: gi|585110090|gb|EWM27794.1| (hypothetical protein Naga_100324g1 [Nannochloropsis gaditana])

HSP 1 Score: 1153.27 bits (2982), Expect = 0.000e+0
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0 
Query:    1 MKPSSPPNQRMRIETGLGTPDREHGGSGIVGAWPCGLGIRKSLLLFTGVLLISAVFILNSTPPSLPLLRPPPPPPVDTSLYTNFTTALILPEPHEDWVSFERSAAPRFFTHQELYTLPPPPSSPSSSLPASSCVDSGLPSHCCLGAFSLAGLMVWDSIACANANFLSYQLPHTSPSLPSSTSPGASGLGRYRDMGDVLGGLGNRTLTIWGDSVASQHAHAMECSWLRSGKAETVRYEKLDFNRIFKKKEEGGGFNRAGTYGTNALYTWQTRLRARGGSEGEGGKEVEEKGVEGTMKLYLTYRPLLNESAGLLAEADVLVVNFGLHYLIDKREEYKLEMREMLRALAPFGRNEQKRLIWRETSAQHHFNEGGEFPLTIDPERFGVSRKDYVATMNRCFPIHFGPYIHPQWRDKLLLALAAEEGWEVRFLDGYDGRGGDEFGREEEGGGMAEPRGPRRGQGRGQGCGEKEGSGVEDVRYVEGMRMGGGRGGGREGGREGGREGGRKPVLYWLPFYRLTSERLDLHPYNEWKGKYDCTHYCYTPFLWDPLVEGLAEAVEEEGRGGCDGKV 567
            MKPSSPPNQRMRIETGLGTPDREHGGSGIVGAWPCGLGIRKSLLLFTGVLLISAVFILNSTPPSLPLLRPPPPPPVDTSLYTNFTTALILPEPHEDWVSFERSAAPRFFTHQELYTLPPPPSSPSSSLPASSCVDSGLPSHCCLGAFSLAGLMVWDSIACANANFLSYQLPHTSPSLPSSTSPGASGLGRYRDMGDVLGGLGNRTLTIWGDSVASQHAHAMECSWLRSGKAETVRYEKLDFNRIFKKKEEGGGFNRAGTYGTNALYTWQTRLRARGGSEGEGGKEVEEKGVEGTMKLYLTYRPLLNESAGLLAEADVLVVNFGLHYLIDKREEYKLEMREMLRALAPFGRNEQKRLIWRETSAQHHFNEGGEFPLTIDPERFGVSRKDYVATMNRCFPIHFGPYIHPQWRDKLLLALAAEEGWEVRFLDGYDGRGGDEFGREEEGGGMAEPRGPRRGQGRGQGCGEKEGSGVEDVRYVEGMRMGGGRGGGREGGREGGREGGRKPVLYWLPFYRLTSERLDLHPYNEWKGKYDCTHYCYTPFLWDPLVEGLAEAVEEEGRGGCDGKV
Sbjct:    1 MKPSSPPNQRMRIETGLGTPDREHGGSGIVGAWPCGLGIRKSLLLFTGVLLISAVFILNSTPPSLPLLRPPPPPPVDTSLYTNFTTALILPEPHEDWVSFERSAAPRFFTHQELYTLPPPPSSPSSSLPASSCVDSGLPSHCCLGAFSLAGLMVWDSIACANANFLSYQLPHTSPSLPSSTSPGASGLGRYRDMGDVLGGLGNRTLTIWGDSVASQHAHAMECSWLRSGKAETVRYEKLDFNRIFKKKEEGGGFNRAGTYGTNALYTWQTRLRARGGSEGEGGKEVEEKGVEGTMKLYLTYRPLLNESAGLLAEADVLVVNFGLHYLIDKREEYKLEMREMLRALAPFGRNEQKRLIWRETSAQHHFNEGGEFPLTIDPERFGVSRKDYVATMNRCFPIHFGPYIHPQWRDKLLLALAAEEGWEVRFLDGYDGRGGDEFGREEEGGGMAEPRGPRRGQGRGQGCGEKEGSGVEDVRYVEGMRMGGGRGGGREGGREGGREGGRKPVLYWLPFYRLTSERLDLHPYNEWKGKYDCTHYCYTPFLWDPLVEGLAEAVEEEGRGGCDGKV 567
[Close]
BLAST of EWM27794.1 vs. NCBI_GenBank
Match: gi|553182092|ref|XP_005853678.1| (hypothetical protein NGA_0474400 [Nannochloropsis gaditana CCMP526] >gi|422295383|gb|EKU22682.1| hypothetical protein NGA_0474400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 896.73 bits (2316), Expect = 0.000e+0
Identity = 442/443 (99.77%), Postives = 442/443 (99.77%), Query Frame = 0 
Query:   34 PCGLGIRKSLLLFTGVLLISAVFILNSTPPSLPLLRPPPPPPVDTSLYTNFTTALILPEPHEDWVSFERSAAPRFFTHQELYTLPPPPSSPSSSLPASSCVDSGLPSHCCLGAFSLAGLMVWDSIACANANFLSYQLPHTSPSLPSSTSPGASGLGRYRDMGDVLGGLGNRTLTIWGDSVASQHAHAMECSWLRSGKAETVRYEKLDFNRIFKKKEEGGGFNRAGTYGTNALYTWQTRLRARGGSEGEGGKEVEEKGVEGTMKLYLTYRPLLNESAGLLAEADVLVVNFGLHYLIDKREEYKLEMREMLRALAPFGRNEQKRLIWRETSAQHHFNEGGEFPLTIDPERFGVSRKDYVATMNRCFPIHFGPYIHPQWRDKLLLALAAEEGWEVRFLDGYDGRGGDEFGREEEGGGMAEPRGPRRGQGRGQGCGEKEGSGVEDVR 476
            P GLGIRKSLLLFTGVLLISAVFILNSTPPSLPLLRPPPPPPVDTSLYTNFTTALILPEPHEDWVSFERSAAPRFFTHQELYTLPPPPSSPSSSLPASSCVDSGLPSHCCLGAFSLAGLMVWDSIACANANFLSYQLPHTSPSLPSSTSPGASGLGRYRDMGDVLGGLGNRTLTIWGDSVASQHAHAMECSWLRSGKAETVRYEKLDFNRIFKKKEEGGGFNRAGTYGTNALYTWQTRLRARGGSEGEGGKEVEEKGVEGTMKLYLTYRPLLNESAGLLAEADVLVVNFGLHYLIDKREEYKLEMREMLRALAPFGRNEQKRLIWRETSAQHHFNEGGEFPLTIDPERFGVSRKDYVATMNRCFPIHFGPYIHPQWRDKLLLALAAEEGWEVRFLDGYDGRGGDEFGREEEGGGMAEPRGPRRGQGRGQGCGEKEGSGVEDVR
Sbjct:   10 PGGLGIRKSLLLFTGVLLISAVFILNSTPPSLPLLRPPPPPPVDTSLYTNFTTALILPEPHEDWVSFERSAAPRFFTHQELYTLPPPPSSPSSSLPASSCVDSGLPSHCCLGAFSLAGLMVWDSIACANANFLSYQLPHTSPSLPSSTSPGASGLGRYRDMGDVLGGLGNRTLTIWGDSVASQHAHAMECSWLRSGKAETVRYEKLDFNRIFKKKEEGGGFNRAGTYGTNALYTWQTRLRARGGSEGEGGKEVEEKGVEGTMKLYLTYRPLLNESAGLLAEADVLVVNFGLHYLIDKREEYKLEMREMLRALAPFGRNEQKRLIWRETSAQHHFNEGGEFPLTIDPERFGVSRKDYVATMNRCFPIHFGPYIHPQWRDKLLLALAAEEGWEVRFLDGYDGRGGDEFGREEEGGGMAEPRGPRRGQGRGQGCGEKEGSGVEDVR 452
The following BLAST results are available for this feature:
BLAST of EWM27794.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585110090|gb|EWM27794.1|0.000e+0100.00hypothetical protein Naga_100324g1 [Nannochloropsi... [more]
gi|553182092|ref|XP_005853678.1|0.000e+099.77hypothetical protein NGA_0474400 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2890rna2890Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications