EWM27797.1, cds2876 (CDS) Nannochloropsis gaditana

Overview
NameEWM27797.1
Unique Namecds2876
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:161739..161786 +
Alignment locationCM002460.1:162316..162824 +
Alignment locationCM002460.1:163030..163039 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27797.1
Productserine threonine-protein kinase plk4
Orig transcript idgnl|cribi|Naga_100686g1.1366.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:161739..161786 +
CM002460.1supercontigCM002460.1:162316..162824 +
CM002460.1supercontigCM002460.1:163030..163039 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|585110096|gb|EWM27797.1| (serine threonine-protein kinase plk4 [Nannochloropsis gaditana])

HSP 1 Score: 381.719 bits (979), Expect = 4.462e-134
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query:    1 MEINVSQGIEDFDVGQPSQHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSSSLPF 188
            MEINVSQGIEDFDVGQPSQHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSSSLPF
Sbjct:    1 MEINVSQGIEDFDVGQPSQHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSSSLPF 188          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|551665035|ref|XP_005835280.1| (hypothetical protein GUITHDRAFT_39878, partial [Guillardia theta CCMP2712] >gi|428179429|gb|EKX48300.1| hypothetical protein GUITHDRAFT_39878, partial [Guillardia theta CCMP2712])

HSP 1 Score: 127.487 bits (319), Expect = 1.966e-33
Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 0
Query:   12 FDVGQPSQHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
             ++  PS  ++ +   FED  +VYLVLEL  GG+L+++L   K L+ E EA E+  QI++ + +LH H + HRD+KLSNLLL        R+K+SDFGL++ +  D +E +                  GTP+YM+PEV+   + HG ASDVWS GCL Y+++VG  PF   S
Sbjct:   14 INLDHPS--VVEMYTYFEDDHSVYLVLELCEGGELYRFLHVRK-LIPEDEAAELFRQIVTGIEYLHSHNIAHRDLKLSNLLLTSDK----RIKISDFGLSIVLNNDNKESET---------------VCGTPNYMSPEVI-SRSPHGLASDVWSLGCLLYSMIVGCPPFERRS 163          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|676434734|ref|XP_009047324.1| (hypothetical protein LOTGIDRAFT_111275, partial [Lottia gigantea] >gi|556113514|gb|ESP02166.1| hypothetical protein LOTGIDRAFT_111275, partial [Lottia gigantea])

HSP 1 Score: 125.561 bits (314), Expect = 2.947e-32
Identity = 66/165 (40.00%), Postives = 102/165 (61.82%), Query Frame = 0
Query:   21 LIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTY-GTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            ++ L   FED   VYLVLE+   G+L+KYL+ +  +L E +AK+ + QI+  + +LH H +LHRD+KLSN+L+   +    ++K++DFGLA  +   GE+                R+T  GTP+Y++PEV+   A HG  +DVWS GC+ YT LVG+ PF +++
Sbjct:   64 ILELYSYFEDADYVYLVLEICENGELYKYLQNNGKILSEEKAKDFLYQIVQGLLYLHSHGILHRDLKLSNILITSDN----KLKIADFGLATQLSIAGEK----------------RYTMCGTPNYISPEVVTRSA-HGLEADVWSLGCMLYTFLVGKPPFDTNT 207          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|769849079|ref|XP_011635919.1| (PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase polo-like [Pogonomyrmex barbatus])

HSP 1 Score: 130.568 bits (327), Expect = 4.547e-32
Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G F+D   +Y++LEL R   + +  +R K L  E E +  + QIL  V +LH+H+++HRD+KL NL L D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APEVL     H   +DVWS GC+ YTLLVG+ PF +SS
Sbjct:   80 RHIVGFHGFFDDSNNIYIILELCRKRSMMELHKRRKAL-SECETRYFMKQILDGVXYLHQHRIIHRDLKLGNLFLNDE----LQVKIGDFGLATRLEHDGERKKT---------------VCGTPNYIAPEVL-TKVGHSYEADVWSIGCIMYTLLVGKPPFETSS 224          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|801405554|ref|XP_012062113.1| (PREDICTED: serine/threonine-protein kinase PLK1, partial [Atta cephalotes])

HSP 1 Score: 127.102 bits (318), Expect = 5.501e-32
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G F+D K +Y++LEL R   + +  +R K L  E E +  + QIL  V +LH+++++HRD+KL NL L D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APEVL     H   +D+WS GC+ YTLLVG+ PF +SS
Sbjct:   50 RHIVGFHGFFDDNKNIYIILELCRKRSMMELHKRRKAL-SECETRYFMKQILDGVFYLHQNKIIHRDLKLGNLFLNDD----LQVKIGDFGLAAKLVHDGERKKT---------------VCGTPNYIAPEVLTKIG-HSYEADIWSIGCIMYTLLVGKPPFETSS 194          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|861643919|gb|KMQ94499.1| (serine threonine-protein kinase polo [Lasius niger])

HSP 1 Score: 130.183 bits (326), Expect = 8.751e-32
Identity = 69/166 (41.57%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G F+D   +Y++LEL R   + +  +R K L  E E +  + QIL  V +LH+H+++HRD+KL NL L D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APEVL     H   +DVWS GC+ YTLLVG+ PF +SS
Sbjct:   80 RHIVGFHGFFDDSHNIYIILELCRKRSMMELHKRRKAL-SECETRYFMKQILDGVFYLHQHRIIHRDLKLGNLFLNDD----LQVKIGDFGLATKLEHDGERKKT---------------VCGTPNYIAPEVL-TKVGHSYEADVWSIGCIMYTLLVGKPPFETSS 224          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|998512015|ref|XP_015516563.1| (PREDICTED: serine/threonine-protein kinase polo [Neodiprion lecontei])

HSP 1 Score: 129.413 bits (324), Expect = 1.318e-31
Identity = 68/166 (40.96%), Postives = 99/166 (59.64%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G FED + +Y++LEL R   + +  +R K L  E E +  + QIL  VA+LH+++++HRD+KL NL L+D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APE+L     H    D+WS GC+ YTLLVG+ PF +SS
Sbjct:   81 RHIVGFHGFFEDIQNIYIILELCRKRSMMELHKRRKAL-TECETRYYMKQILDGVAYLHKNKIIHRDLKLGNLFLDDE----LQVKIGDFGLATKLEHDGERKKT---------------LCGTPNYIAPEILMKSG-HSYEVDIWSIGCIMYTLLVGKPPFETSS 225          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|1069681297|ref|XP_018302139.1| (PREDICTED: serine/threonine-protein kinase polo [Trachymyrmex zeteki] >gi|1069681300|ref|XP_018302140.1| PREDICTED: serine/threonine-protein kinase polo [Trachymyrmex zeteki] >gi|1069681303|ref|XP_018302141.1| PREDICTED: serine/threonine-protein kinase polo [Trachymyrmex zeteki] >gi|1012982627|gb|KYQ56404.1| Serine/threonine-protein kinase PLK1 [Trachymyrmex zeteki])

HSP 1 Score: 129.413 bits (324), Expect = 1.418e-31
Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G F+D   +Y++LEL R   + +  +R K L  E E +  + QIL  V +LH+H+++HRD+KL NL L D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APEVL     H   +D+WS GC+ YTLLVG+ PF +SS
Sbjct:   81 RHIVGFHGFFDDSNNIYIILELCRKRSMMELHKRRKAL-SECETRYFMKQILEGVFYLHQHRIIHRDLKLGNLFLNDD----LQVKIGDFGLATKLEHDGERKKT---------------VCGTPNYIAPEVL-TKIGHSYEADIWSIGCIMYTLLVGKPPFETSS 225          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|780691140|ref|XP_011699659.1| (PREDICTED: serine/threonine-protein kinase polo isoform X1 [Wasmannia auropunctata])

HSP 1 Score: 129.028 bits (323), Expect = 1.600e-31
Identity = 68/166 (40.96%), Postives = 97/166 (58.43%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G F+D   +Y++LEL R   + +  +R K L  E E +  + QIL  V +LH+H+++HRD+KL NL L D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APEVL     H   +D+WS GC+ YTLLVG+ PF +SS
Sbjct:   80 RHIVGFHGFFDDSNNIYIILELCRKRSMMELHKRRKAL-SECETRYFMKQILDGVYYLHQHRIIHRDLKLGNLFLNDD----LQVKIGDFGLATRLEHDGERKKT---------------VCGTPNYIAPEVL-TKIGHSYEADIWSIGCIMYTLLVGKPPFETSS 224          
BLAST of EWM27797.1 vs. NCBI_GenBank
Match: gi|1070145442|ref|XP_018377973.1| (PREDICTED: serine/threonine-protein kinase PLK1 [Trachymyrmex cornetzi] >gi|1009408720|gb|KYN28013.1| Serine/threonine-protein kinase PLK1 [Trachymyrmex cornetzi])

HSP 1 Score: 129.028 bits (323), Expect = 1.995e-31
Identity = 68/166 (40.96%), Postives = 98/166 (59.04%), Query Frame = 0
Query:   19 QHLIGLLGCFEDRKAVYLVLELSRGGDLHKYLRRHKGLLEESEAKEIIVQILSTVAFLHRHQVLHRDIKLSNLLLEDSHARPLRVKLSDFGLAVAVGEDGEEEKRGFEGREGGTSVTMRHTYGTPDYMAPEVLFDGARHGPASDVWSAGCLFYTLLVGRGPFRSSS 184
            +H++G  G F+D K +Y++LEL R   + +  +R K L  E E +  + QIL  V +LH+++++HRD+KL NL L D     L+VK+ DFGLA  +  DGE +K                  GTP+Y+APEVL     H   +D+WS GC+ YTLLVG+ PF +SS
Sbjct:   80 RHIVGFHGFFDDNKNIYIILELCRKRSMMELHKRRKAL-SECETRYFMKQILDGVFYLHQNKIIHRDLKLGNLFLNDD----LQVKIGDFGLAAKLVHDGERKKT---------------VCGTPNYIAPEVLTKTG-HSYEADIWSIGCIMYTLLVGKPPFETSS 224          
The following BLAST results are available for this feature:
BLAST of EWM27797.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110096|gb|EWM27797.1|4.462e-134100.00serine threonine-protein kinase plk4 [Nannochlorop... [more]
gi|551665035|ref|XP_005835280.1|1.966e-3341.04hypothetical protein GUITHDRAFT_39878, partial [Gu... [more]
gi|676434734|ref|XP_009047324.1|2.947e-3240.00hypothetical protein LOTGIDRAFT_111275, partial [L... [more]
gi|769849079|ref|XP_011635919.1|4.547e-3241.57PREDICTED: LOW QUALITY PROTEIN: serine/threonine-p... [more]
gi|801405554|ref|XP_012062113.1|5.501e-3240.96PREDICTED: serine/threonine-protein kinase PLK1, p... [more]
gi|861643919|gb|KMQ94499.1|8.751e-3241.57serine threonine-protein kinase polo [Lasius niger... [more]
gi|998512015|ref|XP_015516563.1|1.318e-3140.96PREDICTED: serine/threonine-protein kinase polo [N... [more]
gi|1069681297|ref|XP_018302139.1|1.418e-3140.96PREDICTED: serine/threonine-protein kinase polo [T... [more]
gi|780691140|ref|XP_011699659.1|1.600e-3140.96PREDICTED: serine/threonine-protein kinase polo is... [more]
gi|1070145442|ref|XP_018377973.1|1.995e-3140.96PREDICTED: serine/threonine-protein kinase PLK1 [T... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2884rna2884Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications