EWM27808.1, cds2874 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|585110109|gb|EWM27808.1| (multicopper oxidase type 2 [Nannochloropsis gaditana]) HSP 1 Score: 175.252 bits (443), Expect = 1.162e-55 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEIYDPEKEKAGMVAREGEYPGDV 84
MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEIYDPEKEKAGMVAREGEYPGDV
Sbjct: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEIYDPEKEKAGMVAREGEYPGDV 84
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|298704886|emb|CBJ28403.1| (Multicopper oxidase, type 1 is implicated in celullar iron transport [Ectocarpus siliculosus]) HSP 1 Score: 88.1965 bits (217), Expect = 1.282e-18 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
Query: 4 GEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEIYD 65
G+G D++VGDWRD+IS+P G VTIRWRADD+TG+A AHCHIF HSDTGM FEI+D
Sbjct: 376 GDGPDWSVGDWRDTISIPTP----GNVTIRWRADDFTGEAVAHCHIFGHSDTGMMMNFEIFD 433
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|676382641|ref|XP_009034599.1| (hypothetical protein AURANDRAFT_71033 [Aureococcus anophagefferens] >gi|323455174|gb|EGB11043.1| hypothetical protein AURANDRAFT_71033 [Aureococcus anophagefferens]) HSP 1 Score: 84.7297 bits (208), Expect = 2.439e-17 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEI 63
+SHGEGVDYAVGDWRD+I+LP G+V IR+RA DY G + AHCHIF+HSD GM + F+I
Sbjct: 502 LSHGEGVDYAVGDWRDTITLPT----PGWVKIRFRAADYDGPSLAHCHIFSHSDLGMQHKFDI 560
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|669151730|ref|XP_008611427.1| (hypothetical protein SDRG_07376 [Saprolegnia diclina VS20] >gi|530736901|gb|EQC35143.1| hypothetical protein SDRG_07376 [Saprolegnia diclina VS20]) HSP 1 Score: 79.7221 bits (195), Expect = 1.166e-15 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEI 63
M+HG G+DY+VGDWRD+I+LP GG VTIR+R D+TG AHCHI H+D GM+ EI
Sbjct: 495 MTHGHGLDYSVGDWRDTITLPY----GGNVTIRFRPMDFTGLVAAHCHILGHADVGMALLVEI 553
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|953500276|emb|CEG38917.1| (multicopper oxidase [Plasmopara halstedii]) HSP 1 Score: 79.337 bits (194), Expect = 1.679e-15 Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEI 63
MSHG GVDY +GDWRD IS+P G VTIR+R +D+TG AHCHI HSD GM F+I
Sbjct: 603 MSHGHGVDYEIGDWRDVISIPT----PGDVTIRFRPEDFTGFVAAHCHILGHSDAGMIAGFDI 661
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|813199252|ref|XP_012209197.1| (hypothetical protein SPRG_14633 [Saprolegnia parasitica CBS 223.65] >gi|641525659|gb|KDO20094.1| hypothetical protein SPRG_14633 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 79.337 bits (194), Expect = 2.069e-15 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEI 63
M+HG G+DY+VGDWRD+I+LP GG VTIR+R D+TG AHCHI H+D GM+ EI
Sbjct: 489 MTHGHGLDYSVGDWRDTITLPY----GGNVTIRFRPLDFTGLVAAHCHILGHADVGMALLVEI 547
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|1173936338|gb|OQR87300.1| (hypothetical protein ACHHYP_09146 [Achlya hypogyna]) HSP 1 Score: 78.5666 bits (192), Expect = 3.319e-15 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMSYTFEI 63
+SHG GVD++VGDWRD+I+LP GG TIR+R D+TG AHCHI HSD GM EI
Sbjct: 1048 LSHGHGVDHSVGDWRDTITLPF----GGTATIRFRPTDFTGLLAAHCHILGHSDAGMIMLLEI 1106 HSP 2 Score: 77.7962 bits (190), Expect = 6.626e-15 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGMS 58
MSHG G+DY+VGDWRD+I+LP GG TIR+R D+TG AHCHI H+D GM+
Sbjct: 500 MSHGHGLDYSVGDWRDTITLPY----GGNTTIRFRPTDFTGLVAAHCHILGHADVGMA 553
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|970649674|gb|KUF88881.1| (Multicopper oxidase mco [Phytophthora nicotianae] >gi|970658109|gb|KUF95913.1| hypothetical protein AM588_10007665 [Phytophthora nicotianae]) HSP 1 Score: 78.1814 bits (191), Expect = 5.145e-15 Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGM 57
MSHG GVDY +GDWRD IS+P G VTIR+R +DYTG AHCHI HSD GM
Sbjct: 607 MSHGHGVDYEIGDWRDVISVPT----PGNVTIRFRPEDYTGIVAAHCHILGHSDAGM 659
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|675207623|ref|XP_008912696.1| (hypothetical protein PPTG_16687 [Phytophthora parasitica INRA-310] >gi|568087140|gb|ETN02015.1| hypothetical protein PPTG_16687 [Phytophthora parasitica INRA-310]) HSP 1 Score: 78.1814 bits (191), Expect = 5.145e-15 Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGM 57
MSHG GVDY +GDWRD IS+P G VTIR+R +DYTG AHCHI HSD GM
Sbjct: 607 MSHGHGVDYEIGDWRDVISVPT----PGNVTIRFRPEDYTGIVAAHCHILGHSDAGM 659
BLAST of EWM27808.1 vs. NCBI_GenBank
Match: gi|567950150|gb|ETK75868.1| (hypothetical protein L915_17597 [Phytophthora parasitica] >gi|567978819|gb|ETL29305.1| hypothetical protein L916_17491 [Phytophthora parasitica] >gi|570940180|gb|ETP05437.1| hypothetical protein F441_17957 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 78.1814 bits (191), Expect = 5.145e-15 Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 0
Query: 1 MSHGEGVDYAVGDWRDSISLPLLPAGGGFVTIRWRADDYTGKAPAHCHIFAHSDTGM 57
MSHG GVDY +GDWRD IS+P G VTIR+R +DYTG AHCHI HSD GM
Sbjct: 607 MSHGHGVDYEIGDWRDVISVPT----PGNVTIRFRPEDYTGIVAAHCHILGHSDAGM 659 The following BLAST results are available for this feature:
BLAST of EWM27808.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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