EWM27809.1, cds2863 (CDS) Nannochloropsis gaditana

Overview
NameEWM27809.1
Unique Namecds2863
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:117798..118250 +

Link to JBrowse

Properties
Property NameValue
Start range117798
Start range.
Protein idEWM27809.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101609g1.2324.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:117798..118250 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27809.1 vs. NCBI_GenBank
Match: gi|585110111|gb|EWM27809.1| (hypothetical protein Naga_101609g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 277.33 bits (708), Expect = 4.981e-94
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 
Query:    1 LPPPPPPFPQPIAVHLHGRPEGPQTYRNGRSQGGGRHLGGDRGRAPSPHLSPAQGADGLEGRETGGRERGREGGREGRRGGEAYPWEAGSVGGVDTGHGRGARKGGREGEREGTDGCEPYLSGSIVGVGGARIRWEEGQEGGREEGHGQG 150
            LPPPPPPFPQPIAVHLHGRPEGPQTYRNGRSQGGGRHLGGDRGRAPSPHLSPAQGADGLEGRETGGRERGREGGREGRRGGEAYPWEAGSVGGVDTGHGRGARKGGREGEREGTDGCEPYLSGSIVGVGGARIRWEEGQEGGREEGHGQG
Sbjct:    1 LPPPPPPFPQPIAVHLHGRPEGPQTYRNGRSQGGGRHLGGDRGRAPSPHLSPAQGADGLEGRETGGRERGREGGREGRRGGEAYPWEAGSVGGVDTGHGRGARKGGREGEREGTDGCEPYLSGSIVGVGGARIRWEEGQEGGREEGHGQG 150
The following BLAST results are available for this feature:
BLAST of EWM27809.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110111|gb|EWM27809.1|4.981e-94100.00hypothetical protein Naga_101609g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2871rna2871Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications