EWM30403.1, cds286 (CDS) Nannochloropsis gaditana

Overview
NameEWM30403.1
Unique Namecds286
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:713911..714000 +
Alignment locationCM002455.1:714069..714215 +
Alignment locationCM002455.1:714473..714579 +
Alignment locationCM002455.1:714655..714811 +
Alignment locationCM002455.1:714905..715027 +
Alignment locationCM002455.1:715099..715266 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30403.1
ProductProtein of unknown function DUF2046
Orig transcript idgnl|cribi|Naga_100026g30.10657.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:713911..714000 +
CM002455.1supercontigCM002455.1:714069..714215 +
CM002455.1supercontigCM002455.1:714473..714579 +
CM002455.1supercontigCM002455.1:714655..714811 +
CM002455.1supercontigCM002455.1:714905..715027 +
CM002455.1supercontigCM002455.1:715099..715266 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046
Homology
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|585113063|gb|EWM30403.1| (Protein of unknown function DUF2046 [Nannochloropsis gaditana])

HSP 1 Score: 513.457 bits (1321), Expect = 0.000e+0
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query:    1 MQPPLSPTSTASPVQDFAYWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTEIEREEEHLTNNLSRKLTRERAEKEALEARLLSERKQVLESRALLKEDACLITQLKAAVEPLKDEGALKLKDRESILQVSERLINRLSVIESATSDKEEDEESKEGTDSISSIGATAGGGSSRGSSIAGGSDV 263
            MQPPLSPTSTASPVQDFAYWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTEIEREEEHLTNNLSRKLTRERAEKEALEARLLSERKQVLESRALLKEDACLITQLKAAVEPLKDEGALKLKDRESILQVSERLINRLSVIESATSDKEEDEESKEGTDSISSIGATAGGGSSRGSSIAGGSDV
Sbjct:    1 MQPPLSPTSTASPVQDFAYWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTEIEREEEHLTNNLSRKLTRERAEKEALEARLLSERKQVLESRALLKEDACLITQLKAAVEPLKDEGALKLKDRESILQVSERLINRLSVIESATSDKEEDEESKEGTDSISSIGATAGGGSSRGSSIAGGSDV 263          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|635367914|emb|CCI43876.1| (unnamed protein product, partial [Albugo candida])

HSP 1 Score: 120.168 bits (300), Expect = 9.455e-29
Identity = 80/189 (42.33%), Postives = 109/189 (57.67%), Query Frame = 0
Query:   21 KQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTEIEREEE-----------------------------HLTNNLSRKLTRERAEKEALEARLLSERKQVLESRALLKEDAC 180
            +QK   LENE+ +LKE  ++M  +TE EEE I N+L  RL ELK EKEHLA+EVEREEE ++N+LQKKL KL+ EKVD EN+LE EQE IVNKL  E+   R+EKE L+ E+ +E+                               L N L +++ + + EK+ LE +L  +   VL+      +D C
Sbjct:   36 RQKTQSLENEVRSLKEALVQMGEKTEVEEERITNRLFKRLNELKSEKEHLAMEVEREEEFLTNSLQKKLDKLRHEKVDLENKLEVEQEYIVNKLSKELQAAREEKERLIVELSKEDNTVRRTLESQVAQIINEKVHLENELEQEQEFLVNRLQKQVAKVQMEKKRLEKKLTRDSVAVLDQLMTQMDDIC 224          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|325192223|emb|CCA26677.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 108.612 bits (270), Expect = 1.147e-24
Identity = 84/220 (38.18%), Postives = 119/220 (54.09%), Query Frame = 0
Query:   21 KQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEI------------------SKLRKEKETLMTEIEREEEH-----------LTNNLSRKLTRERAEKEALEARLLSERKQVLESRALLKEDAC----------LITQLKAAVEPLKDEGALKLK 201
            +QK   LENE+ ALKE  ++M  +TE EEE I N+L  RL ELK EKEHLA+EVEREEE ++N+LQKKL +L+ EKVD EN+LE EQE IVNKL  E+                  + +R+  E+ + +I  E+ H           L N L +++ +   EK+ LE +L  +   VLE      E  C           + Q+K+ V+  K+    K++
Sbjct:   14 RQKTQLLENEVKALKEALVRMGEKTEVEEERITNRLFKRLNELKSEKEHLAMEVEREEEFLTNSLQKKLDQLRHEKVDLENKLEVEQEYIVNKLSKELQAAREEKERLLLELSKEDNTVRRTLESQVAQIINEKVHLENELEQEQEFLVNRLQKQVAKIHMEKKRLEKKLTRDSVSVLEHLMTQIETLCVKIDKDDVETFLNQVKSVVQEAKERQMQKMQ 233          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|298706320|emb|CBJ29335.1| (coiled-coil domain 6-like protein [Ectocarpus siliculosus])

HSP 1 Score: 108.227 bits (269), Expect = 2.217e-24
Identity = 87/198 (43.94%), Postives = 123/198 (62.12%), Query Frame = 0
Query:    3 PPLS--------PTSTASP----------VQDFAYWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINK--------------LINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTEIEREEEHLTNNLSRKLTRERAEKEALEARLLSERKQV 168
            PP+S        P+ T SP           ++    K K   LE ELV L++ ++++  + EAEEE +IN+              ++ RL ELKKEKE LA+EVEREEE+++NTLQKKL +L+QEKVD ENQLE EQE +VNKL  +++++  +KE +  E+EREEE LTN L +KL + + EK A+E +L  ER +V
Sbjct:   22 PPVSTPTRPASFPSCTTSPGSPELEVSVLRRELLMEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINRTQQVEAKEESLFNRMMKRLMELKKEKEDLALEVEREEELLTNTLQKKLNQLRQEKVDLENQLEREQEYVVNKLRKQLAQVTADKERMAMEVEREEEFLTNKLVKKLDQLKEEKAAVEEQLAQERGEV 219          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|544216921|ref|XP_005538605.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449019167|dbj|BAM82569.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 101.293 bits (251), Expect = 3.762e-22
Identity = 56/113 (49.56%), Postives = 83/113 (73.45%), Query Frame = 0
Query:   16 DFAYWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETL 128
            + A  +++ + LENE+   K  ++++  + EAEEE + N+L  RL EL+ EKE LA ++EREEE ++NTLQ++L +L++EK+D EN LEAEQEAIVN+L  E+ KL+KEK  L
Sbjct:   47 ELANERRRRIALENEVQQQKALNVRIQQQLEAEEEALTNRLNKRLSELRLEKEQLARDIEREEEYLTNTLQQRLEQLKKEKIDMENALEAEQEAIVNRLQREVQKLQKEKAAL 159          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|1004135659|gb|KXZ43712.1| (hypothetical protein GPECTOR_82g246 [Gonium pectorale])

HSP 1 Score: 102.064 bits (253), Expect = 7.010e-22
Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 0
Query:   19 YWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTE-------IEREEEHLTNNLSRKLTRERAEKEALE 158
            Y K++A  L  EL   KE +I +  + E EEE I NKL+ RL++LKKEK  LA EV +EEE ++NTLQK+L KL +EKVD EN+LEAEQE +VNKL   I +L  EK  LM E       +E E+E++ N L +++ +  ++K +L+
Sbjct:   26 YEKRRADGLAEELRLAKEHNIVVQKQIEQEEEYITNKLMKRLDQLKKEKAVLASEVAQEEEFLTNTLQKRLEKLAKEKVDLENRLEAEQEYVVNKLRKAIEQLSVEKNKLMCEKVELENQLECEQEYILNRLQKQVDKLASDKVSLQ 172          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|545702263|ref|XP_005703462.1| (coiled-coil domain-containing protein 6 [Galdieria sulphuraria] >gi|452819891|gb|EME26942.1| coiled-coil domain-containing protein 6 [Galdieria sulphuraria])

HSP 1 Score: 98.5969 bits (244), Expect = 1.444e-21
Identity = 62/117 (52.99%), Postives = 84/117 (71.79%), Query Frame = 0
Query:   17 FAYWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTEIE 133
            FA   ++ V +E EL  +K+ S  M    EAEEE I NKLI RL ELK+EKE LAV++E+EEE ++N LQ+KL +L++EKV+ ENQLE EQE IVN+L  ++ +LR EK+ L  +IE
Sbjct:   34 FAEKHKRKV-VEQELKEMKQLSFSMQTHIEAEEEYIANKLIKRLTELKEEKERLAVQIEQEEEYLTNNLQQKLEQLRREKVNIENQLEQEQEFIVNRLQRQLDELRVEKQQLEKKIE 149          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|302854485|ref|XP_002958750.1| (hypothetical protein VOLCADRAFT_121752 [Volvox carteri f. nagariensis] >gi|300255925|gb|EFJ40206.1| hypothetical protein VOLCADRAFT_121752 [Volvox carteri f. nagariensis])

HSP 1 Score: 99.7525 bits (247), Expect = 5.571e-21
Identity = 67/147 (45.58%), Postives = 97/147 (65.99%), Query Frame = 0
Query:   19 YWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTE-------IEREEEHLTNNLSRKLTRERAEKEALE 158
            Y +++A  L  EL   KE ++ +  + E EEE I NKL+ RL++LKKEK  LA EV +EEE ++NTLQK+L KL +EKVD EN+LEAEQE +VNKL   I +L  EK  LM E       +E E+E++ N L +++ +  ++K +L+
Sbjct:   26 YERRRADGLAEELRLAKEHNVVVQKQIEQEEEYITNKLMKRLDQLKKEKAVLASEVAQEEEFLANTLQKRLEKLAKEKVDLENRLEAEQEYVVNKLRKAIDQLSVEKNKLMCEKVELENQLECEQEYILNRLQKQVDKLASDKLSLQ 172          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|159474686|ref|XP_001695456.1| (coiled-coil domain 6-like protein [Chlamydomonas reinhardtii] >gi|158275939|gb|EDP01714.1| coiled-coil domain 6-like protein [Chlamydomonas reinhardtii])

HSP 1 Score: 99.7525 bits (247), Expect = 5.956e-21
Identity = 65/147 (44.22%), Postives = 98/147 (66.67%), Query Frame = 0
Query:   19 YWKQKAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNKLGAEISKLRKEKETLMTE-------IEREEEHLTNNLSRKLTRERAEKEALE 158
            Y +++A  L  +L   +E +I +  + E EEE I NKL+ RL++LK+EK  LA EV +EEE ++NTLQK+L KL +EKVD EN+LEAEQE +VNKL   I +L  EK  LM+E       +E E+E++ N L +++ +  ++K +L+
Sbjct:   25 YERRRADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLMKRLDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYVVNKLRKAIEQLSVEKSKLMSEKVELENQLECEQEYILNRLQKQVDKLASDKLSLQ 171          
BLAST of EWM30403.1 vs. NCBI_GenBank
Match: gi|754346088|ref|XP_004364245.2| (hypothetical protein CAOG_03406 [Capsaspora owczarzaki ATCC 30864] >gi|765551809|gb|KJE92430.1| hypothetical protein CAOG_003406 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 94.3597 bits (233), Expect = 1.393e-18
Identity = 58/154 (37.66%), Postives = 98/154 (63.64%), Query Frame = 0
Query:   23 KAVQLENELVALKERSIKMFCRTEAEEEGIINKLINRLEELKKEKEHLAVEVEREEEMISNTLQKKLTKLQQEKVDQENQLEAEQEAIVNK--------------LGAEISKLRKEKETLMTEIEREEEHLTNNLSRKLTRERAEKEALEARLL 162
            + V L++++  ++++S+ M  + EAEEE I   L+ R+++L+K KE LA++VEREEE ++NTLQKKL +LQ EK   E  LE EQE +VNK              + +++SKL+ EK  +   +E+E+E + N L++++   R++K+ L+  L 
Sbjct:   43 RVVHLQSDIAQVRKQSMDMQLQVEAEEEHIALTLLKRIDQLQKSKEALALQVEREEEYLTNTLQKKLLQLQHEKEHLEKILEHEQENVVNKMKQQVDQLQREKVLMSSKLSKLQNEKVQIENALEQEQEFMINKLTKQIEHLRSDKKHLQEELF 196          
The following BLAST results are available for this feature:
BLAST of EWM30403.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113063|gb|EWM30403.1|0.000e+0100.00Protein of unknown function DUF2046 [Nannochlorops... [more]
gi|635367914|emb|CCI43876.1|9.455e-2942.33unnamed protein product, partial [Albugo candida][more]
gi|325192223|emb|CCA26677.1|1.147e-2438.18conserved hypothetical protein [Albugo laibachii N... [more]
gi|298706320|emb|CBJ29335.1|2.217e-2443.94coiled-coil domain 6-like protein [Ectocarpus sili... [more]
gi|544216921|ref|XP_005538605.1|3.762e-2249.56hypothetical protein, conserved [Cyanidioschyzon m... [more]
gi|1004135659|gb|KXZ43712.1|7.010e-2246.94hypothetical protein GPECTOR_82g246 [Gonium pector... [more]
gi|545702263|ref|XP_005703462.1|1.444e-2152.99coiled-coil domain-containing protein 6 [Galdieria... [more]
gi|302854485|ref|XP_002958750.1|5.571e-2145.58hypothetical protein VOLCADRAFT_121752 [Volvox car... [more]
gi|159474686|ref|XP_001695456.1|5.956e-2144.22coiled-coil domain 6-like protein [Chlamydomonas r... [more]
gi|754346088|ref|XP_004364245.2|1.393e-1837.66hypothetical protein CAOG_03406 [Capsaspora owczar... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna286rna286Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications