EWM27820.1, cds2853 (CDS) Nannochloropsis gaditana

Overview
NameEWM27820.1
Unique Namecds2853
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:98425..98823 +

Link to JBrowse

Properties
Property NameValue
Start range98425
Start range.
Protein idEWM27820.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101997g1.989.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:98425..98823 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27820.1 vs. NCBI_GenBank
Match: gi|585110135|gb|EWM27820.1| (hypothetical protein Naga_101997g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 249.595 bits (636), Expect = 1.528e-83
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 
Query:    1 FLPPSLPPSFSQIVEDASEDAQHGSRPPSQRHARLLPLLPPLLLLLHRFSSRQLVLDSPYEPLPPPLPPARLPPSTPDPQNGNELSLRLHVPLAKRLLGLWKAFGSRLEWLPAQVAATRFLFSLPWPSLCFA 132
            FLPPSLPPSFSQIVEDASEDAQHGSRPPSQRHARLLPLLPPLLLLLHRFSSRQLVLDSPYEPLPPPLPPARLPPSTPDPQNGNELSLRLHVPLAKRLLGLWKAFGSRLEWLPAQVAATRFLFSLPWPSLCFA
Sbjct:    1 FLPPSLPPSFSQIVEDASEDAQHGSRPPSQRHARLLPLLPPLLLLLHRFSSRQLVLDSPYEPLPPPLPPARLPPSTPDPQNGNELSLRLHVPLAKRLLGLWKAFGSRLEWLPAQVAATRFLFSLPWPSLCFA 132
The following BLAST results are available for this feature:
BLAST of EWM27820.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110135|gb|EWM27820.1|1.528e-83100.00hypothetical protein Naga_101997g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2861rna2861Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications