EWM27830.1, cds2847 (CDS) Nannochloropsis gaditana

Overview
NameEWM27830.1
Unique Namecds2847
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:84376..84443 -
Alignment locationCM002460.1:83872..83925 -
Alignment locationCM002460.1:83558..83663 -
Alignment locationCM002460.1:83236..83322 -
Alignment locationCM002460.1:82958..83005 -
Alignment locationCM002460.1:82686..82794 -
Alignment locationCM002460.1:82359..82448 -
Alignment locationCM002460.1:81969..82053 -
Alignment locationCM002460.1:81795..81882 -
Alignment locationCM002460.1:81555..81627 -
Alignment locationCM002460.1:81389..81438 -
Alignment locationCM002460.1:81054..81242 -
Alignment locationCM002460.1:80828..80980 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27830.1
Productatp-dependent rna helicase
Orig transcript idgnl|cribi|Naga_100074g18.788.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:84376..84443 -
CM002460.1supercontigCM002460.1:83872..83925 -
CM002460.1supercontigCM002460.1:83558..83663 -
CM002460.1supercontigCM002460.1:83236..83322 -
CM002460.1supercontigCM002460.1:82958..83005 -
CM002460.1supercontigCM002460.1:82686..82794 -
CM002460.1supercontigCM002460.1:82359..82448 -
CM002460.1supercontigCM002460.1:81969..82053 -
CM002460.1supercontigCM002460.1:81795..81882 -
CM002460.1supercontigCM002460.1:81555..81627 -
CM002460.1supercontigCM002460.1:81389..81438 -
CM002460.1supercontigCM002460.1:81054..81242 -
CM002460.1supercontigCM002460.1:80828..80980 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005635nuclear envelope
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001650Helicase_C
Homology
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|585110154|gb|EWM27830.1| (atp-dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 810.446 bits (2092), Expect = 0.000e+0
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKIDCERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQVADAVKTRRAERLAAEAAEEKEQEKKEAEKEAATAATAAAASGGPVTAGEGSENAGKGKIRAKKEAKPRRKEPEIEEKGVGKLRGREFNVIGMETMFQLLRCSGFSMKS 399
            MTLDEADQLLDAKNKIDCERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQVADAVKTRRAERLAAEAAEEKEQEKKEAEKEAATAATAAAASGGPVTAGEGSENAGKGKIRAKKEAKPRRKEPEIEEKGVGKLRGREFNVIGMETMFQLLRCSGFSMKS
Sbjct:    1 MTLDEADQLLDAKNKIDCERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQVADAVKTRRAERLAAEAAEEKEQEKKEAEKEAATAATAAAASGGPVTAGEGSENAGKGKIRAKKEAKPRRKEPEIEEKGVGKLRGREFNVIGMETMFQLLRCSGFSMKS 399          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|1128472136|dbj|GAV52669.1| (hypothetical protein ZYGR_0AG06600 [Zygosaccharomyces rouxii])

HSP 1 Score: 155.606 bits (392), Expect = 5.392e-39
Identity = 99/294 (33.67%), Postives = 152/294 (51.70%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPE--TYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +  +            +  LFSAT+ D +    +  VP  +    ++L +NEV V  I QLY+D  ++ +          K + +  L    TI G  +IFV +K++   L  RLRQ  H + S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+P              T TG P+  TY+HRVGRTGRFG +G+A+S V + + + +L AI++ +             V + +VP D   +VEK+ K+V
Sbjct:  252 FVLDEADNMLDKQGLGDQCIRVKKFLPKS-----------TQLVLFSATFPDKVKEYAKRVVPNANS---LELQRNEVNVSAIKQLYMDCNDESH----------KYEVLTELYGLLTI-GSSIIFVSTKKTANVLYARLRQEGH-QVSILHGDLQSKERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP-------------TTQTGQPDPSTYVHRVGRTGRFGRKGVAISFVHDKKSYQILSAIQQYF-----------QDVEMTRVPTDDWDKVEKIVKKV 495          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|410078307|ref|XP_003956735.1| (hypothetical protein KAFR_0C06090 [Kazachstania africana CBS 2517] >gi|372463319|emb|CCF57600.1| hypothetical protein KAFR_0C06090 [Kazachstania africana CBS 2517])

HSP 1 Score: 154.066 bits (388), Expect = 1.521e-38
Identity = 97/290 (33.45%), Postives = 149/290 (51.38%), Query Frame = 0
Query:    3 LDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
            LDEAD +LD +   D C R++  +  T            +  LFSAT++D +    +  VP  +    ++L +NEV V  I QLY+D  ++          + K + +  L    TI G  +IFV +K +   L  +L+Q  H + S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+P  P                P TYIHR+GRTGRFG  G+A+S V++ + +N L AI++ +             + + +VP D   EVEK+ K+V
Sbjct:  230 LDEADNMLDKQGLGDQCIRVKRFLPKTT-----------QLVLFSATFADAVRQYAKKVVPEANT---LELQRNEVNVSAIKQLYMDCNDE----------QHKYEVLCELYGLLTI-GSSIIFVATKNTANLLYGKLKQEGH-QVSILHGDLQSQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLPN-----------GLADPATYIHRIGRTGRFGRTGVAISFVSDKKSFNTLSAIQKYF-----------GDIEMTRVPTDDWDEVEKIVKKV 471          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|1091720602|emb|SCU77759.1| (LADA_0A02080g1_1 [Lachancea dasiensis CBS 10888])

HSP 1 Score: 152.91 bits (385), Expect = 4.549e-38
Identity = 97/292 (33.22%), Postives = 147/292 (50.34%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +               +  LFSAT+ D++    R  VP  +    ++L KNEV V  I QL++D  ++            K + +  L    TI G  +IFVQ+K++   L  +L+Q  H + S  HG L   ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+P             V     P TYIHR+GRTGRFG  G+A+S V + + + +L AI++ +             + + +VP D   EVEK+ K+V
Sbjct:  232 FVLDEADNMLDKQGLGDQCLRVKKFLPKA-----------TQLVLFSATFDDSVRNYARKVVPNANS---LELQKNEVNVSAIKQLFMDCTDEN----------NKYEVLTELYGLLTI-GSSIIFVQTKQTANVLYAKLKQEGH-QVSILHGDLQSSERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP-----------TTVQGKADPSTYIHRIGRTGRFGRTGVAISFVHDRKSFEVLTAIQKYF-----------GDIEMTRVPTDDWDEVEKIVKKV 475          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|254579254|ref|XP_002495613.1| (ZYRO0B15576p [Zygosaccharomyces rouxii] >gi|238938503|emb|CAR26680.1| ZYRO0B15576p [Zygosaccharomyces rouxii] >gi|1128477007|dbj|GAV47656.1| hypothetical protein ZYGR_0H05020 [Zygosaccharomyces rouxii])

HSP 1 Score: 152.525 bits (384), Expect = 6.763e-38
Identity = 97/294 (32.99%), Postives = 152/294 (51.70%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPE--TYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +  +            +  LFSAT+ D +    +  VP  +    ++L +NEV V  I QLY+D  ++ +          K + +  L    TI G  +IFV +K++   L  RL+Q  H + S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+P              T TG P+  TY+HRVGRTGRFG +G+A+S V + + + +L +I++ +             V + +VP D   +VEK+ K+V
Sbjct:  245 FVLDEADNMLDKQGLGDQCIRVKKFLPKS-----------TQLVLFSATFPDQVKEYAKRVVPDANS---LELQRNEVNVSAIKQLYMDCNDESH----------KYEVLTELYGLLTI-GSSIIFVSTKKTANLLYARLKQEGH-QVSILHGDLQSKERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP-------------TTQTGQPDPSTYVHRVGRTGRFGRKGVAISFVHDKKSYQILSSIQKYF-----------QDVEMTRVPTDDWDKVEKIVKKV 488          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|1147416669|ref|XP_020076968.1| (DEAD-domain-containing protein [Hyphopichia burtonii NRRL Y-1933] >gi|1064977866|gb|ODV67901.1| DEAD-domain-containing protein [Hyphopichia burtonii NRRL Y-1933])

HSP 1 Score: 152.14 bits (383), Expect = 1.037e-37
Identity = 97/292 (33.22%), Postives = 148/292 (50.68%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LDA+N  D C R++  +              C+  LFSAT+ D + A    FVP  +    ++L + E+ V+ I QLY+D     +   +FE        ++  L      G  +IFV++K +   L  R++Q  H   S  HGGL    RD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+P         +E N  D   P TY+HR+GRTGRFG  G+++S V + + +  L AI + +             + + +VP D   EVEK+ K+V
Sbjct:  258 FVLDEADNMLDAQNLGDQCLRVKRALPKD-----------CQLVLFSATFPDRVRAYAEKFVPNANS---LELKQEELNVDGIKQLYMDCDSVNH---KFE--------VLCELYSLLTIGSSIIFVKTKDTANKLYGRMKQEGH-TVSVLHGGLETTARDKLIDDFREGRSKVLITTNVLARGIDIASVSMVVNYDLPV--------DESNKPD---PSTYLHRIGRTGRFGRLGVSISFVHDKKSYQDLMAIRKYF-----------GDIEMTKVPTDDWDEVEKIVKKV 501          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|326634444|pdb|3PEW|A (Chain A, S. Cerevisiae Dbp5 L327v Bound To Rna And Adp Bef3 >gi|333361498|pdb|3RRM|A Chain A, S. Cerevisiae Dbp5 L327v Bound To Nup159, Gle1 H337r, Ip6 And Adp >gi|333361501|pdb|3RRN|A Chain A, S. Cerevisiae Dbp5 L327v Bound To Gle1 H337r And Ip6)

HSP 1 Score: 149.828 bits (377), Expect = 1.114e-37
Identity = 98/292 (33.56%), Postives = 151/292 (51.71%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +               +  LFSAT++D +    +  VP  +    ++L  NEV V+ I QLY+D + +   A +F       D +  L    TI G  +IFV +K++   L  +L+   H E S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+   P +A    +        P TYIHR+GRTGRFG +G+A+S V +   +N+L AI++ +             + + +VP D   EVEK+ K+V
Sbjct:  149 FVLDEADNMLDQQGLGDQCIRVKRFLPKDT-----------QLVLFSATFADAVRQYAKKIVPNANT---LELQTNEVNVDAIKQLYMDCKNE---ADKF-------DVLTELYGVMTI-GSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDL---PTLANGQAD--------PATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF-----------GDIEMTRVPTDDWDEVEKIVKKV 392          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|365763281|gb|EHN04811.1| (Dbp5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7])

HSP 1 Score: 149.443 bits (376), Expect = 1.244e-37
Identity = 98/292 (33.56%), Postives = 151/292 (51.71%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +               +  LFSAT++D +    +  VP  +    ++L  NEV V+ I QLY+D + +   A +F       D +  L    TI G  +IFV +K++   L  +L+   H E S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+   P +A    +        P TYIHR+GRTGRFG +G+A+S V +   +N+L AI++ +             + + +VP D   EVEK+ K+V
Sbjct:  127 FVLDEADNMLDQQGLGDQCIRVKRFLPKDT-----------QLVLFSATFADAVRQYAKKIVPNANT---LELQXNEVNVDAIKQLYMDCKNE---ADKF-------DVLTELYGLMTI-GSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDL---PTLANGQAD--------PATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF-----------GDIEMTRVPTDDWDEVEKIVKKV 370          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|578050284|emb|CDH14215.1| (probable ATP-dependent RNA helicase DBP5 [Zygosaccharomyces bailii ISA1307] >gi|1159861692|gb|AQZ14884.1| DBP5 (YOR046C) [Zygosaccharomyces parabailii])

HSP 1 Score: 151.369 bits (381), Expect = 1.300e-37
Identity = 95/294 (32.31%), Postives = 151/294 (51.36%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGA--PETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +  +            +  LFSAT+ D +    +  VP  +    ++L +NEV V  I QLY+D  ++ +          K + +  L    TI G  +IFV +K++   L  RL+Q  H + S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+P              T +G   P TY+HR+GRTGRFG +G+A+S V + + +N+L +I+  +             V + ++P D   +VEK+ K+V
Sbjct:  232 FVLDEADNMLDKQGLGDQCIRVKKFLPKST-----------QLVLFSATFPDAVREYAKRVVPNANT---LELQRNEVNVSAIKQLYMDCNDENH----------KYEVLCELYGLLTI-GSSIIFVATKKTANQLYARLKQEGH-QVSILHGDLQSQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP-------------TTQSGQADPSTYVHRIGRTGRFGRKGVAISFVHDKKSYNVLSSIQHYF-----------GDVEMTRIPTDDWDQVEKMVKKV 475          
BLAST of EWM27830.1 vs. NCBI_GenBank
Match: gi|326634448|pdb|3PEY|A (Chain A, S. Cerevisiae Dbp5 Bound To Rna And Adp Bef3)

HSP 1 Score: 149.828 bits (377), Expect = 1.384e-37
Identity = 98/292 (33.56%), Postives = 151/292 (51.71%), Query Frame = 0
Query:    1 MTLDEADQLLDAKNKID-CERIRGLIEGTAPGRAKSGTPICRYALFSATYSDTIMANVRDFVPRTSKRALIQLDKNEVMVEEIAQLYVDLREQGYDAPRFEQQRRKEDFIVALLKERTITGKVVIFVQSKRSCAALADRLRQLRHLEASEFHGGLTPEERDIFFADFIQGRRNVLVATDVLSRGIDVEGIAWVINFDMPFQPRVARSDEEGNVTDTGAPETYIHRVGRTGRFGAEGIAVSLVANNQEWNLLRAIERDYALGIKAQAGQEAAVLIHQVPADSIPEVEKVAKQV 291
              LDEAD +LD +   D C R++  +               +  LFSAT++D +    +  VP  +    ++L  NEV V+ I QLY+D + +   A +F       D +  L    TI G  +IFV +K++   L  +L+   H E S  HG L  +ERD    DF +GR  VL+ T+VL+RGID+  ++ V+N+D+   P +A    +        P TYIHR+GRTGRFG +G+A+S V +   +N+L AI++ +             + + +VP D   EVEK+ K+V
Sbjct:  149 FVLDEADNMLDQQGLGDQCIRVKRFLPKDT-----------QLVLFSATFADAVRQYAKKIVPNANT---LELQTNEVNVDAIKQLYMDCKNE---ADKF-------DVLTELYGLMTI-GSSIIFVATKKTANVLYGKLKSEGH-EVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDL---PTLANGQAD--------PATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF-----------GDIEMTRVPTDDWDEVEKIVKKV 392          
The following BLAST results are available for this feature:
BLAST of EWM27830.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110154|gb|EWM27830.1|0.000e+0100.00atp-dependent rna helicase [Nannochloropsis gadita... [more]
gi|1128472136|dbj|GAV52669.1|5.392e-3933.67hypothetical protein ZYGR_0AG06600 [Zygosaccharomy... [more]
gi|410078307|ref|XP_003956735.1|1.521e-3833.45hypothetical protein KAFR_0C06090 [Kazachstania af... [more]
gi|1091720602|emb|SCU77759.1|4.549e-3833.22LADA_0A02080g1_1 [Lachancea dasiensis CBS 10888][more]
gi|254579254|ref|XP_002495613.1|6.763e-3832.99ZYRO0B15576p [Zygosaccharomyces rouxii] >gi|238938... [more]
gi|1147416669|ref|XP_020076968.1|1.037e-3733.22DEAD-domain-containing protein [Hyphopichia burton... [more]
gi|326634444|pdb|3PEW|A1.114e-3733.56Chain A, S. Cerevisiae Dbp5 L327v Bound To Rna And... [more]
gi|365763281|gb|EHN04811.1|1.244e-3733.56Dbp5p [Saccharomyces cerevisiae x Saccharomyces ku... [more]
gi|578050284|emb|CDH14215.1|1.300e-3732.31probable ATP-dependent RNA helicase DBP5 [Zygosacc... [more]
gi|326634448|pdb|3PEY|A1.384e-3733.56Chain A, S. Cerevisiae Dbp5 Bound To Rna And Adp B... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2855rna2855Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications