EWM27834.1, cds2844 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|585110158|gb|EWM27834.1| (n-alpha-acetyltransferase catalytic subunit [Nannochloropsis gaditana]) HSP 1 Score: 522.702 bits (1345), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0
Query: 1 MSMKGKGGKGGKAKGGGKSCSGGGTIDIKRSKDRVTASINESLLTLRQALFNDLGQNKDVSVGIAAPFFKYDRKGVDANIEFKTKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDEDGKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTDKMAGAPSLILWVSKKLEKNPKWKRDRKRRRRWEGRSEKDEGKPVFLSCISFYGR 257
MSMKGKGGKGGKAKGGGKSCSGGGTIDIKRSKDRVTASINESLLTLRQALFNDLGQNKDVSVGIAAPFFKYDRKGVDANIEFKTKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDEDGKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTDKMAGAPSLILWVSKKLEKNPKWKRDRKRRRRWEGRSEKDEGKPVFLSCISFYGR
Sbjct: 1 MSMKGKGGKGGKAKGGGKSCSGGGTIDIKRSKDRVTASINESLLTLRQALFNDLGQNKDVSVGIAAPFFKYDRKGVDANIEFKTKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDEDGKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTDKMAGAPSLILWVSKKLEKNPKWKRDRKRRRRWEGRSEKDEGKPVFLSCISFYGR 257
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|551577963|ref|XP_005774583.1| (hypothetical protein EMIHUDRAFT_207283 [Emiliania huxleyi CCMP1516] >gi|485626439|gb|EOD22154.1| hypothetical protein EMIHUDRAFT_207283 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 74.7146 bits (182), Expect = 7.165e-12 Identity = 54/207 (26.09%), Postives = 92/207 (44.44%), Query Frame = 0
Query: 23 GGTIDIKRSKDRVTASINESLLTLRQALFNDLGQNKDVSVGIAAPFFKYDRKGVDANIEFKT--KLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDEDGKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTDKMAGAPSLILWVSKKLEKNPKWKR 227
G + R+ T++ + + TLR+AL ND G ++D+ + A R G+D IEF + KLN+ + ++ ++E Y+ SGYGWD+EDK +LT E+R L+ RE+ + R+ I+G FR ++QG+ + M G+P L ++ L P+++R
Sbjct: 23 GSDVAAVRTVKLSTSANGDVVSTLRRALRNDDGTDRDLLNDLPAGLRALKRSGLDLEIEFHSGKKLNRADAKVCLAMCREELQEEYEVSGYGWDEEDKWGELTSSESRLLLFREA--------------------------------------------VGRR---IVGYASFRLTLQGECWNCMEGSPCLFVY---DLLVLPEYRR 179
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|255080736|ref|XP_002503941.1| (predicted protein [Micromonas commoda] >gi|226519208|gb|ACO65199.1| predicted protein [Micromonas commoda]) HSP 1 Score: 69.707 bits (169), Expect = 3.578e-10 Identity = 48/175 (27.43%), Postives = 82/175 (46.86%), Query Frame = 0
Query: 41 ESLLTLRQALFNDLGQNKDVSVGIAAPFFKYDRKGVDANIEFKT--KLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDEDGKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTDKMAGAPSLIL 213
E L TLRQAL ++LG ++DV G A F KYDR V +I F+T + +E+ WA++ + ++ + G+ W + + L +P +R+ ++ E T ++P + + + A G+ + HFRF+VQG+ + M G P L+L
Sbjct: 38 EHLTTLRQALRDELGHDRDVVSGFGA-FTKYDRNDVALDIHFRTGSTITDDELEWAYELVSSNLGPL----GHKWKPQALMDDLCDPSSRYALVTER----TSSAP-------------------AAEKKPASKSKGKKKAPAPPLGKPVAFAHFRFTVQGETREAMEGEPVLML 184
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|443689496|gb|ELT91870.1| (hypothetical protein CAPTEDRAFT_94915, partial [Capitella teleta]) HSP 1 Score: 65.855 bits (159), Expect = 1.132e-9 Identity = 33/100 (33.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query: 62 VGIAAPFFKYDRKGVDANIEF--KTKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDED 159
+ + APF KY+R G++ NI T + + W F ++D+M+ +Y+ S +GW+DE K A++ E A FL+ RE++ V F +D D D
Sbjct: 7 LAVLAPFKKYERNGLNVNISCMRATSMPDDLFEWCFKLVRDNMQSLYEQSDWGWEDEQKKAEMREDAAWFLIARENQNNSPVACVHFR------FDMDND 100
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|961132638|ref|XP_014786548.1| (PREDICTED: N-alpha-acetyltransferase 40-like isoform X2 [Octopus bimaculoides] >gi|918289934|gb|KOF68681.1| hypothetical protein OCBIM_22006701mg [Octopus bimaculoides]) HSP 1 Score: 62.3882 bits (150), Expect = 5.482e-8 Identity = 30/87 (34.48%), Postives = 52/87 (59.77%), Query Frame = 0
Query: 62 VGIAAPFFKYDRKGVDANIEFK--TKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRF 146
+ + PF K++R G+D IE ++L+KE + WAF K +M+ +Y+AS +GW D +K ++TE +A +L+ R+ + V F
Sbjct: 39 LSMLMPFKKFERNGLDIKIECSKVSELDKETIDWAFQLTKSNMQSLYEASDWGWSDREKKTEMTEDKAWYLIARDLDSKKPVACVHF 125
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|961132635|ref|XP_014786547.1| (PREDICTED: N-alpha-acetyltransferase 40-like isoform X1 [Octopus bimaculoides]) HSP 1 Score: 62.003 bits (149), Expect = 7.508e-8 Identity = 30/87 (34.48%), Postives = 52/87 (59.77%), Query Frame = 0
Query: 62 VGIAAPFFKYDRKGVDANIEFK--TKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRF 146
+ + PF K++R G+D IE ++L+KE + WAF K +M+ +Y+AS +GW D +K ++TE +A +L+ R+ + V F
Sbjct: 58 LSMLMPFKKFERNGLDIKIECSKVSELDKETIDWAFQLTKSNMQSLYEASDWGWSDREKKTEMTEDKAWYLIARDLDSKKPVACVHF 144
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|303271273|ref|XP_003054998.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226462972|gb|EEH60250.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 62.7734 bits (151), Expect = 1.011e-7 Identity = 47/180 (26.11%), Postives = 82/180 (45.56%), Query Frame = 0
Query: 36 TASINESLLTLRQALFNDLGQNKDVSVGIAAPFFKYDRKGVDANIEFKT--KLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSPRFALKERNVYDQDEDGKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTDKMAGAPSLIL 213
T + E L LR AL ++LG ++DV G PF K+DR G++ ++ F+T ++ +E+ WA + ++ A G D + + L +P +R+ ++ E + + +T + K + G+ + HFRF+VQG+ D MAG P L+L
Sbjct: 35 TNDVKEHLSILRSALRDELGNDRDVLAGFG-PFTKFDRNGLELDVSFRTGTSISDDELEWAHALVTSNLA----ARGQEMDAQALMDDLCDPSSRYYLVTE------------------------------RAVASEKTTKTGKKKKSAAAGKPVAFAHFRFTVQGEVRDAMAGEPVLLL 179
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|1126205975|ref|XP_019636545.1| (PREDICTED: N-alpha-acetyltransferase 40-like [Branchiostoma belcheri]) HSP 1 Score: 60.8474 bits (146), Expect = 2.458e-7 Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 0
Query: 62 VGIAAPFFKYDRKGVDANIEFK--TKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVIRESRPEGTVTSP-RFALKERNVYDQDED---------GKKGEKQASGGDMKQTTRMKMARKKGQILGVVHFRFSVQGDFTD 203
+ PF KY+R G++ IE K +L+K+ V WAF K +M+ +Y+ S +GW+D K +LTE +A +LV R + S RF + D+DE+ K +K+ G M Q +++ K Q+L V+ F + + D
Sbjct: 54 MATMTPFKKYERNGLNLVIECKKVAELDKDTVDWAFSITKSNMQTLYEESNWGWNDRLKKEELTEDKAWYLVARNQEGQPVAFSHFRFDM------DEDEEVLYCYEIQLTKPAQKKGLGKFMMQI--LQLLANKAQMLKVMVTVFKMNTESRD 199
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|1207904670|ref|XP_021353397.1| (N-alpha-acetyltransferase 40-like isoform X2 [Mizuhopecten yessoensis]) HSP 1 Score: 60.077 bits (144), Expect = 3.525e-7 Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 0
Query: 62 VGIAAPFFKYDRKGVDANIEF--KTKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVI--RESRPEGTVTSPRFALK--ERNVY 154
+ + APF K++R G+ +EF L +E W FD K +M+++Y+ S +GW D +KL ++TE +A +L+ ES+P T RF ++ E VY
Sbjct: 39 LDLVAPFRKFERNGISLKVEFFRAQDLTQEMTDWVFDLTKKNMQKLYEESDWGWKDREKLEEMTEEKALYLIALDSESKPVA-FTHFRFDMEWDEELVY 136
BLAST of EWM27834.1 vs. NCBI_GenBank
Match: gi|1207904668|ref|XP_021353304.1| (N-alpha-acetyltransferase 40-like isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 60.077 bits (144), Expect = 3.880e-7 Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 0
Query: 62 VGIAAPFFKYDRKGVDANIEF--KTKLNKEEVTWAFDNIKDSMEEIYDASGYGWDDEDKLAQLTEPEARFLVI--RESRPEGTVTSPRFALK--ERNVY 154
+ + APF K++R G+ +EF L +E W FD K +M+++Y+ S +GW D +KL ++TE +A +L+ ES+P T RF ++ E VY
Sbjct: 49 LDLVAPFRKFERNGISLKVEFFRAQDLTQEMTDWVFDLTKKNMQKLYEESDWGWKDREKLEEMTEEKALYLIALDSESKPVA-FTHFRFDMEWDEELVY 146 The following BLAST results are available for this feature:
BLAST of EWM27834.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|