EWM27829.1, cds2841 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|585110152|gb|EWM27828.1| (amidohydrolase 2 [Nannochloropsis gaditana]) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELKKAHNMEVKGNVDTIDHTREKARVSDSSTS 334
MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELKKAHNMEVKGNVDTIDHTREKARVSDSSTS
Sbjct: 70 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELKKAHNMEVKGNVDTIDHTREKARVSDSSTS 403
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|585110153|gb|EWM27829.1| (amidohydrolase 2 [Nannochloropsis gaditana]) HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELKKAHNMEVKGNVDTIDHTREKARVSDSSTS 334
MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELKKAHNMEVKGNVDTIDHTREKARVSDSSTS
Sbjct: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELKKAHNMEVKGNVDTIDHTREKARVSDSSTS 334
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|299473403|emb|CBN77801.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 315.079 bits (806), Expect = 8.838e-103 Identity = 155/302 (51.32%), Postives = 197/302 (65.23%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRL 302
MD H IDVH LVPLPWLE P H ++ +ALEAC+ AN+EMA VV R +GVAL+PT + +++ AV+ + GVALFVGP + P D FE L++ CEE G VW+HP RPQ Y DY++Y+G+G S HQIWNT GW+YDTSVAMVH+ +AGVF+RYP LKVVTHHHG M+PFFT RF TQ +NF + EG LL+D++ FYCDTATFG + NI+QA++FF +VLFGTDTPMDM G FT T+ V GAA + + + N M+ +R
Sbjct: 48 MDEHGIDVHCLVPLPWLECEPGLHADEGKALEACRIANDEMARVVARFPDRLIGVALIPTTTEQA-------------------MIQETTRAVKELGMAGVALFVGPTAKPPDMACFEGLYRTCEELGAVVWMHPCRPQSYADYDSYKGEG-SKHQIWNTFGWIYDTSVAMVHIALAGVFRRYPGLKVVTHHHGAMVPFFTARFDTQRRNFQEVEGDDLLEDLRLFYCDTATFGESAANIQQAIDFFGKSQVLFGTDTPMDMGTRGMFTRTTIASVEALGAAPEDKESFYAGNVLDMLGERF 329
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|1084730181|gb|OGP73780.1| (hypothetical protein A2V86_01390 [Deltaproteobacteria bacterium RBG_16_49_23]) HSP 1 Score: 222.246 bits (565), Expect = 2.872e-66 Identity = 113/308 (36.69%), Postives = 170/308 (55.19%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEG--------LALLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEK 300
MD+ ID+ VLVPLPWLE P H N + EA + N+E+A +V RF GVALLPT + ++++ ++ AV + L G VGP DHP +E L+++ E GVP+W+HP+RP YPDY G+ S +Q+W TL W+ D+S AMV +V +GV++RYP+LK++ HHHG ++P F R F+ G ++ KKFYCDTAT G PL ++ A +FF ++LFG+D PMD +FT ++ V +++ KI+ +N ++++
Sbjct: 89 MDSCGIDLSVLVPLPWLETTPPVHANPKLCAEAARLFNDELATIVNKRPDRFAGVALLPTTN-------------------PEVMLAEFERAVRSLKLVGGFFVVGPTVKQPDHPDYEHLYQKAVELGVPLWVHPSRPPVYPDYV---GEKISQYQVWQTLSWLLDSSTAMVRLVFSGVYERYPDLKLIIHHHGALVPLFAKRMQYGWDYFEQNTGEKQATPISRPYINHFKKFYCDTATQGHEPLLLKMAYDFFGPEKMLFGSDAPMDQTGGKAFTMDARKSVEDLALSKEDQGKIFSENIQRLLKR 374
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|553181079|ref|XP_005853510.1| (hypothetical protein NGA_0138002 [Nannochloropsis gaditana CCMP526] >gi|422295553|gb|EKU22852.1| hypothetical protein NGA_0138002 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 209.534 bits (532), Expect = 1.677e-64 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
Query: 41 MAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQ 139
MAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQ
Sbjct: 1 MAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQ 99
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|672393699|dbj|GAK53317.1| (hypothetical protein U14_04582 [Candidatus Moduliflexus flocculans]) HSP 1 Score: 213.772 bits (543), Expect = 4.712e-63 Identity = 116/308 (37.66%), Postives = 162/308 (52.60%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLA--------LLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEK 300
MD ID+ VLVPLPWLE P + + A K N+E+A +V HS R +GVALLPT +I++ + AV G VGP P DHP +E L+++ E VP+W+HP+RP YPDY G+ S +QIW TL W+ D+S AMV +V GV+ RYPNLK++ HHHG +IP F R F+ G ++ K FYCDTAT G APL ++ +FF S R+LFG+D PMD +FT ++ V +++ KI+ +N ++ +
Sbjct: 89 MDECGIDISVLVPLPWLETSPPVYADPTLCATAAKLFNDEVAEIVNVHSNRMMGVALLPT-------------------TTPEIMVAELERAVRDLHFVGGFFVVGPTVKPPDHPDYEFLYQKAVELDVPLWVHPSRPAIYPDYV---GEKMSEYQIWQTLSWLMDSSAAMVRLVFHGVYDRYPNLKLIIHHHGALIPLFAQRMQYGWDYFEQNTGKKQNTTISSPYIEHFKNFYCDTATQGKAPLLLQMTHDFFGSDRLLFGSDAPMDATSGRAFTMDARASVDGMTISEEDRQKIFSENALKLLRR 374
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|947716275|ref|WP_056378606.1| (amidohydrolase [Sphingomonas sp. Root710] >gi|946134402|gb|KRB86504.1| hypothetical protein ASE00_07335 [Sphingomonas sp. Root710]) HSP 1 Score: 199.519 bits (506), Expect = 6.734e-58 Identity = 109/283 (38.52%), Postives = 153/283 (54.06%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDR----FITQSQNFDDTEGLA---LLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGV 276
MD +D +VL P+PWLEVVP +N RALEA N+ +A + R G+A+LP+ + G E + AV G L VGP + P+D P ++ EE VP+WLHP+RP F+PDY G+ S +Q W GW+ DTS AM+ + ++GVF R+P LK++ HH G ++P +T R F+TQ++ D + LD ++ FYCDTATFG+ + +A EFF R+LFGTD PMD AE G FT + +
Sbjct: 52 MDRLGVDANVLSPIPWLEVVPPVASNPHRALEASVIGNDALAEDIGVDRERLFGIAVLPSANPDGAADE-------------------LRRAVRELGFVGGVLPVGPTAVPMDAPSLAPIFACAEELDVPLWLHPSRPPFWPDYA---GEQRSKYQEWQIFGWLSDTSSAMLRIALSGVFDRHPKLKLIAHHCGALVPLYTTRIETVFLTQAKMGLDIGAVVEAPYLDHLRNFYCDTATFGVDTPMLARAAEFFGPERLLFGTDAPMDHAE-GIFTRNAIASI 311
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|655461674|ref|WP_028844643.1| (amidohydrolase [Thermodesulfovibrio thiophilus]) HSP 1 Score: 195.282 bits (495), Expect = 2.410e-56 Identity = 97/281 (34.52%), Postives = 153/281 (54.45%), Query Frame = 0
Query: 1 MDTHKIDVHVLVPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDRFITQSQNFDDTEGLA--------LLDDMKKFYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSK 273
M+ +++D HV++PLPW+E V + + +A EA K NNE+A +V +S +F+ VA++PT ++ DI++ Y+ + G+ L VGP P+D +++L+K+ +D VPVWLHP+RP Y D Y + S + IW ++GW+ D+S AM+ + ++G F++Y +K + HHHG +I F+ R + F + E ++ K FY DTAT G PL I+ A FF VLFGTD P D E G + T++
Sbjct: 48 MEKYQVDKHVIIPLPWIESVKEVYEDSVKAHEAAKILNNELANLVNKYSDKFIPVAVIPTTNI-------------------DIMLAEYERVIYNLKFKGIYLVVGPTVRPIDDSVYDSLFKKAVQDNVPVWLHPSRPITYSD---YINESMSKYGIWQSIGWLMDSSTAMIRLTLSGAFEKYKGIKFIIHHHGALIGLFSKRLNAGFRLFKNLEAFKSTTTITEPFIEHFKNFYVDTATQGFEPLLIQNAYMFFGIDHVLFGTDVPFD--ENGGYNFTNE 304
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|1125287912|gb|OLC31980.1| (amidohydrolase [Acidobacteria bacterium 13_1_40CM_56_16] >gi|1125384097|gb|OLD21186.1| amidohydrolase [Acidobacteria bacterium 13_1_40CM_3_56_11] >gi|1125581097|gb|OLE88155.1| amidohydrolase [Acidobacteria bacterium 13_1_20CM_2_55_15]) HSP 1 Score: 152.14 bits (383), Expect = 1.209e-39 Identity = 103/311 (33.12%), Postives = 153/311 (49.20%), Query Frame = 0
Query: 8 VHVL-VPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDR----FITQSQNFDDTEGLALLDDMKK--------FYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELK 305
V VL +PLP LE++ E++ + + N+ +A +VQ + RFLG A AS + D ++ + A++ GV ++ PLD P F L++ +P+W+HP R +PDY+ + SL++IW T GW Y+TSVAM +V AG F + PNLK++THH GGMIP+F R + + D + ++LL MKK FY DTA FG P + EFF V+F +D P + A PG + + V ++ DKI+ N EK L+LK
Sbjct: 56 VQVLTLPLPPLEIL----AGPEKSPQLAREGNDGLAELVQKYD-RFLGFA------------------ASLPMNNPDAALKEMERALDQLGASGVQIYSNAAGKPLDAPEFLPLFQEAVRRDIPIWMHPARGADFPDYQT---ETKSLYEIWWTFGWPYETSVAMARLVFAGYFDKLPNLKIITHHMGGMIPYFEGRVGYGWDQLGKRTSDVDYVSLLKSMKKRPVDYFKNFYADTALFGAGPAT-KCGFEFFGLENVVFASDMPFEPA-PGLYARETIKCVEALDLTKEQKDKIYRGN----AEKLLKLK 334
BLAST of EWM27829.1 vs. NCBI_GenBank
Match: gi|1125439829|gb|OLD67425.1| (amidohydrolase [Acidobacteria bacterium 13_1_40CM_2_56_11]) HSP 1 Score: 152.14 bits (383), Expect = 1.234e-39 Identity = 103/311 (33.12%), Postives = 153/311 (49.20%), Query Frame = 0
Query: 8 VHVL-VPLPWLEVVPACHTNKERALEACKRANNEMAAVVQSHSTRFLGVALLPTGHLKGPGKEDEEEGASHEKDGMDILMEAYKHAVETCSLDGVALFVGPLSSPLDHPGFEALWKRCEEDGVPVWLHPNRPQFYPDYEAYRGKGGSLHQIWNTLGWVYDTSVAMVHMVMAGVFQRYPNLKVVTHHHGGMIPFFTDR----FITQSQNFDDTEGLALLDDMKK--------FYCDTATFGLAPLNIRQALEFFESGRVLFGTDTPMDMAEPGSFTSTSKGGVLQCGAAQDVMDKIWGQNFWVMMEKRLELK 305
V VL +PLP LE++ E++ + + N+ +A +VQ + RFLG A AS + D ++ + A++ GV ++ PLD P F L++ +P+W+HP R +PDY+ + SL++IW T GW Y+TSVAM +V AG F + PNLK++THH GGMIP+F R + + D + ++LL MKK FY DTA FG P + EFF V+F +D P + A PG + + V ++ DKI+ N EK L+LK
Sbjct: 56 VQVLTLPLPPLEIL----AGPEKSPQLAREGNDGLAELVQKYD-RFLGFA------------------ASLPMNNPDAALKEMERALDQLGASGVQIYSNAAGKPLDAPEFLPLFQEAVRRDIPIWMHPARGADFPDYQT---ETKSLYEIWWTFGWPYETSVAMARLVFAGYFDKLPNLKIITHHMGGMIPYFEGRVGYGWDQLGKRTSDVDYVSLLKSMKKRPVDYFKNFYADTALFGAGPAT-KCGFEFFGLENVVFASDMPFEPA-PGLYARETIKCVEALDLTKEQKDKIYRGN----AEKLLKLK 334 The following BLAST results are available for this feature:
BLAST of EWM27829.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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