EWM27837.1, cds2838 (CDS) Nannochloropsis gaditana

Overview
NameEWM27837.1
Unique Namecds2838
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:54126..54365 -
Alignment locationCM002460.1:53219..53974 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27837.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100074g8.795.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:54126..54365 -
CM002460.1supercontigCM002460.1:53219..53974 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27837.1 vs. NCBI_GenBank
Match: gi|585110161|gb|EWM27837.1| (hypothetical protein Naga_100074g8 [Nannochloropsis gaditana])

HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0 
Query:    1 MGGRVSTCAMASTCDGLPGNASFQGSYADCSASCTLEYFTFDSTLNTGNNCLCFEQNQCTTAVFLGDQGNNSVLYTLNDLDQPCPAIPFSACDLTNFTCNFDAATFFLGTPASMQECVDEATSANIDILYTFLNVTDGRCYGFTAADCAAGLEPSAGFESAVIQYANPNATCLSKCSDFLPAAYFHKITATVNRAKAGTRPGRRLKYKLTLVPRKVQPSPALLPSLDLSLRISPYLEVKKATLKTTDPALKHAEIDRDADLVTWQNIGGPLFGVGTKKGVPQSLTFTMVAVLAKNAQTAADIGIQAYLSDLNNGICGVLVAETDVLVKTSR 331
            MGGRVSTCAMASTCDGLPGNASFQGSYADCSASCTLEYFTFDSTLNTGNNCLCFEQNQCTTAVFLGDQGNNSVLYTLNDLDQPCPAIPFSACDLTNFTCNFDAATFFLGTPASMQECVDEATSANIDILYTFLNVTDGRCYGFTAADCAAGLEPSAGFESAVIQYANPNATCLSKCSDFLPAAYFHKITATVNRAKAGTRPGRRLKYKLTLVPRKVQPSPALLPSLDLSLRISPYLEVKKATLKTTDPALKHAEIDRDADLVTWQNIGGPLFGVGTKKGVPQSLTFTMVAVLAKNAQTAADIGIQAYLSDLNNGICGVLVAETDVLVKTSR
Sbjct:    1 MGGRVSTCAMASTCDGLPGNASFQGSYADCSASCTLEYFTFDSTLNTGNNCLCFEQNQCTTAVFLGDQGNNSVLYTLNDLDQPCPAIPFSACDLTNFTCNFDAATFFLGTPASMQECVDEATSANIDILYTFLNVTDGRCYGFTAADCAAGLEPSAGFESAVIQYANPNATCLSKCSDFLPAAYFHKITATVNRAKAGTRPGRRLKYKLTLVPRKVQPSPALLPSLDLSLRISPYLEVKKATLKTTDPALKHAEIDRDADLVTWQNIGGPLFGVGTKKGVPQSLTFTMVAVLAKNAQTAADIGIQAYLSDLNNGICGVLVAETDVLVKTSR 331
The following BLAST results are available for this feature:
BLAST of EWM27837.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110161|gb|EWM27837.1|0.000e+0100.00hypothetical protein Naga_100074g8 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2846rna2846Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications