EWM27827.1, cds2832 (CDS) Nannochloropsis gaditana

Overview
NameEWM27827.1
Unique Namecds2832
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:33971..34872 +
Alignment locationCM002460.1:35307..35559 +

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Properties
Property NameValue
Protein idEWM27827.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100074g3.785.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:33971..34872 +
CM002460.1supercontigCM002460.1:35307..35559 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27827.1 vs. NCBI_GenBank
Match: gi|585110150|gb|EWM27826.1| (hypothetical protein Naga_100074g3 [Nannochloropsis gaditana] >gi|585110151|gb|EWM27827.1| hypothetical protein Naga_100074g3 [Nannochloropsis gaditana])

HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 
Query:    1 MSHQPILPPLNDPAVAALKPVTQCYKDLLASLQVTCLLYTLQGHALRTSIEAQTIPIADVATLLESCSTLQDLISFASTSFPCRNADNKDGRCTNQTNESMTSASRMMGALSLRVAPSPHPSASFVHPTPRDDCQRPTCAHNSHAPLPTSISIGSLPDSVLINVISYLTGGARETTDPAGGHVSHAFHNLSHKEIRVQLGDIRAVALRWSVVGTADELWEPVVLALWPVTQSLSPSLLPSLSPSMCRSSLEGPSANGSASLGLYPSWRFHGTHSFHELCLRRGRAIVNPGLCLVTPQWSARYRLHFHIFEERHSIPLFSGEGPLVCQEWQNHHEHRTILRLGPGAAVVTTTFSASGCGGGVGGGDVEGDGSAGGRGGRRQRVER 384
            MSHQPILPPLNDPAVAALKPVTQCYKDLLASLQVTCLLYTLQGHALRTSIEAQTIPIADVATLLESCSTLQDLISFASTSFPCRNADNKDGRCTNQTNESMTSASRMMGALSLRVAPSPHPSASFVHPTPRDDCQRPTCAHNSHAPLPTSISIGSLPDSVLINVISYLTGGARETTDPAGGHVSHAFHNLSHKEIRVQLGDIRAVALRWSVVGTADELWEPVVLALWPVTQSLSPSLLPSLSPSMCRSSLEGPSANGSASLGLYPSWRFHGTHSFHELCLRRGRAIVNPGLCLVTPQWSARYRLHFHIFEERHSIPLFSGEGPLVCQEWQNHHEHRTILRLGPGAAVVTTTFSASGCGGGVGGGDVEGDGSAGGRGGRRQRVER
Sbjct:    1 MSHQPILPPLNDPAVAALKPVTQCYKDLLASLQVTCLLYTLQGHALRTSIEAQTIPIADVATLLESCSTLQDLISFASTSFPCRNADNKDGRCTNQTNESMTSASRMMGALSLRVAPSPHPSASFVHPTPRDDCQRPTCAHNSHAPLPTSISIGSLPDSVLINVISYLTGGARETTDPAGGHVSHAFHNLSHKEIRVQLGDIRAVALRWSVVGTADELWEPVVLALWPVTQSLSPSLLPSLSPSMCRSSLEGPSANGSASLGLYPSWRFHGTHSFHELCLRRGRAIVNPGLCLVTPQWSARYRLHFHIFEERHSIPLFSGEGPLVCQEWQNHHEHRTILRLGPGAAVVTTTFSASGCGGGVGGGDVEGDGSAGGRGGRRQRVER 384
The following BLAST results are available for this feature:
BLAST of EWM27827.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110150|gb|EWM27826.1|0.000e+0100.00hypothetical protein Naga_100074g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2840rna2840Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications