EWM27864.1, cds2810 (CDS) Nannochloropsis gaditana

Overview
NameEWM27864.1
Unique Namecds2810
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1323325..1323360 +
Alignment locationCM002459.1:1323594..1323660 +
Alignment locationCM002459.1:1323819..1323913 +
Alignment locationCM002459.1:1324153..1325232 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27864.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100282g2.5219.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1323325..1323360 +
CM002459.1supercontigCM002459.1:1323594..1323660 +
CM002459.1supercontigCM002459.1:1323819..1323913 +
CM002459.1supercontigCM002459.1:1324153..1325232 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM27864.1 vs. NCBI_GenBank
Match: gi|585110193|gb|EWM27864.1| (hypothetical protein Naga_100282g2 [Nannochloropsis gaditana])

HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0 
Query:    1 MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRNFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE 425
            MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRNFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE
Sbjct:    1 MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRNFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE 425
[Close]
BLAST of EWM27864.1 vs. NCBI_GenBank
Match: gi|553192042|ref|XP_005855504.1| (hypothetical protein NGA_0675300 [Nannochloropsis gaditana CCMP526] >gi|422293562|gb|EKU20862.1| hypothetical protein NGA_0675300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 861.292 bits (2224), Expect = 0.000e+0
Identity = 422/425 (99.29%), Postives = 422/425 (99.29%), Query Frame = 0 
Query:    1 MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRNFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE 425
            MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVR FLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGG NSQHSQILPAQPQKSAEMTVA GSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE
Sbjct:    1 MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRIFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGGNSQHSQILPAQPQKSAEMTVATGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE 425
[Close]
BLAST of EWM27864.1 vs. NCBI_GenBank
Match: gi|553195443|ref|XP_005856147.1| (hypothetical protein NGA_0248700, partial [Nannochloropsis gaditana CCMP526] >gi|422292914|gb|EKU20215.1| hypothetical protein NGA_0248700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0
Identity = 415/418 (99.28%), Postives = 415/418 (99.28%), Query Frame = 0 
Query:    1 MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRNFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTG 418
            MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVR FLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGG NSQHSQILPAQPQKSAEMTVA GSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTG
Sbjct:    1 MYATNTEKRRVKAINKHYRKLSVRKDFGMHGSFSGHITDCWVAHSGQEYAHVLYVDGDEEDIPLQEVRIFLMAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGGNSQHSQILPAQPQKSAEMTVATGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTG 418
[Close]
BLAST of EWM27864.1 vs. NCBI_GenBank
Match: gi|585110194|gb|EWM27865.1| (hypothetical protein Naga_100282g2 [Nannochloropsis gaditana])

HSP 1 Score: 711.064 bits (1834), Expect = 0.000e+0
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0 
Query:   72 MAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE 425
            MAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE
Sbjct:    1 MAPLPPTPPTSPRSSSAPSSESSGREEKECEALKELAIGARSSITLCRVGYGRTEGIEAETITTTASSAPASCAIPPSGEMFCQENASPDVDEAKEASTELLEEDGACEAEGGIEKRKDHEMKEAGKEKEQALCDREREKACQSPVRRHQSEGDKENRGTLQGDGGGVNSQHSQILPAQPQKSAEMTVAAGSTSMVALLEGAVIAEVTTLGGNAAASATETATDEPSSHPFTASSVSSLAPSLPACASKDHGGDCSTGKHGHHTDSTRTSTANALHPRPFNFSDPLPRSPPSALPSSTASVPLPANEMVGTGNSIGAARPGKELTDYKPLVGRFVQKAVEGGGKVTGKHRKTGE 354
The following BLAST results are available for this feature:
BLAST of EWM27864.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 4
Match NameE-valueIdentityDescription
gi|585110193|gb|EWM27864.1|0.000e+0100.00hypothetical protein Naga_100282g2 [Nannochloropsi... [more]
gi|553192042|ref|XP_005855504.1|0.000e+099.29hypothetical protein NGA_0675300 [Nannochloropsis ... [more]
gi|553195443|ref|XP_005856147.1|0.000e+099.28hypothetical protein NGA_0248700, partial [Nannoch... [more]
gi|585110194|gb|EWM27865.1|0.000e+0100.00hypothetical protein Naga_100282g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2818rna2818Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications