EWM27861.1, cds2809 (CDS) Nannochloropsis gaditana

Overview
NameEWM27861.1
Unique Namecds2809
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1322525..1322602 -
Alignment locationCM002459.1:1322220..1322369 -
Alignment locationCM002459.1:1321944..1322020 -
Alignment locationCM002459.1:1321766..1321838 -
Alignment locationCM002459.1:1321547..1321680 -
Alignment locationCM002459.1:1321259..1321389 -
Alignment locationCM002459.1:1320942..1321080 -
Alignment locationCM002459.1:1320766..1320843 -
Alignment locationCM002459.1:1320495..1320594 -
Alignment locationCM002459.1:1320279..1320380 -
Alignment locationCM002459.1:1319953..1320045 -
Alignment locationCM002459.1:1319784..1319872 -
Alignment locationCM002459.1:1319630..1319702 -
Alignment locationCM002459.1:1319462..1319542 -
Alignment locationCM002459.1:1319242..1319379 -
Alignment locationCM002459.1:1319041..1319151 -
Alignment locationCM002459.1:1318771..1318857 -
Alignment locationCM002459.1:1318623..1318693 -
Alignment locationCM002459.1:1318417..1318510 -
Alignment locationCM002459.1:1318120..1318239 -
Alignment locationCM002459.1:1317807..1317932 -
Alignment locationCM002459.1:1317597..1317689 -
Alignment locationCM002459.1:1317350..1317424 -
Alignment locationCM002459.1:1316665..1317192 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27861.1
Productpre-mrna-splicing factor syf1
Orig transcript idgnl|cribi|Naga_100282g3.5216.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1322525..1322602 -
CM002459.1supercontigCM002459.1:1322220..1322369 -
CM002459.1supercontigCM002459.1:1321944..1322020 -
CM002459.1supercontigCM002459.1:1321766..1321838 -
CM002459.1supercontigCM002459.1:1321547..1321680 -
CM002459.1supercontigCM002459.1:1321259..1321389 -
CM002459.1supercontigCM002459.1:1320942..1321080 -
CM002459.1supercontigCM002459.1:1320766..1320843 -
CM002459.1supercontigCM002459.1:1320495..1320594 -
CM002459.1supercontigCM002459.1:1320279..1320380 -
CM002459.1supercontigCM002459.1:1319953..1320045 -
CM002459.1supercontigCM002459.1:1319784..1319872 -
CM002459.1supercontigCM002459.1:1319630..1319702 -
CM002459.1supercontigCM002459.1:1319462..1319542 -
CM002459.1supercontigCM002459.1:1319242..1319379 -
CM002459.1supercontigCM002459.1:1319041..1319151 -
CM002459.1supercontigCM002459.1:1318771..1318857 -
CM002459.1supercontigCM002459.1:1318623..1318693 -
CM002459.1supercontigCM002459.1:1318417..1318510 -
CM002459.1supercontigCM002459.1:1318120..1318239 -
CM002459.1supercontigCM002459.1:1317807..1317932 -
CM002459.1supercontigCM002459.1:1317597..1317689 -
CM002459.1supercontigCM002459.1:1317350..1317424 -
CM002459.1supercontigCM002459.1:1316665..1317192 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0016043cellular component organization
GO:0006396RNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013105TPR_2
IPR011990TPR-like_helical_dom
IPR003107HAT
Homology
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|585110190|gb|EWM27861.1| (pre-mrna-splicing factor syf1 [Nannochloropsis gaditana])

HSP 1 Score: 1945.24 bits (5038), Expect = 0.000e+0
Identity = 946/946 (100.00%), Postives = 946/946 (100.00%), Query Frame = 0
Query:    1 MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAFSQVNYMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKRLQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTEIQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR 946
            MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAFSQVNYMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKRLQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTEIQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR
Sbjct:    1 MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAFSQVNYMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKRLQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTEIQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR 946          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|553192014|ref|XP_005855497.1| (pre-mRNA-splicing factor SYF1 [Nannochloropsis gaditana CCMP526] >gi|553195416|ref|XP_005856142.1| pre-mRNA-splicing factor SYF1 [Nannochloropsis gaditana CCMP526] >gi|422292909|gb|EKU20210.1| pre-mRNA-splicing factor SYF1 [Nannochloropsis gaditana CCMP526] >gi|422293555|gb|EKU20855.1| pre-mRNA-splicing factor SYF1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1744.55 bits (4517), Expect = 0.000e+0
Identity = 883/1005 (87.86%), Postives = 894/1005 (88.96%), Query Frame = 0
Query:    1 MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEK------------------------------------VPAVEAADFYIRYAK--LEEEHGLAR----HAMAIYDR--GTQAVPEDKRYDFFL---------------LYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAFSQVNYMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKRLQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTEIQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR 946
            MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYL TLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEK                                    VP  +  DF++ Y K  + E+  L+     HA     +  G   +    R+  FL               L+  KVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPG+WKKWQDFEVN                         YMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKRLQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTEIQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR
Sbjct:    8 MANDRGVVSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLHTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPADEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVIVEKPPLSELGRMHAQYWVRKCVGHTCMSLAHRHASFLALLMLVLSSLLLPHFLFSFKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGYWKKWQDFEVN-------------------------YMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEELEAVERQAKRLQAVTAAAVAALERNEEEIDIEDMEEEGEEGDRIQEGGEEKEIHIEGDTEIQVKAKPVPAAVFARAGLEEDAKDGEVGNGGSMGALERLKKAGGQR 987          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|971506788|dbj|GAQ91417.1| (tetratricopeptide repeat like superfamily protein [Klebsormidium nitens])

HSP 1 Score: 867.84 bits (2241), Expect = 0.000e+0
Identity = 421/764 (55.10%), Postives = 558/764 (73.04%), Query Frame = 0
Query:   15 LLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVK-ETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGD--DTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEV-LPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAFSQVNY 774
            LL  E+D  +EEEI R+PFSLK W RYL A+  A   KR L++ERA+K LPGSYKLW AYL ERK  + G+ P++HP Y+ L NTFERALV + +MPR+WLDYL  L++ ++ T+ R  FD AL SLP+TQH+R+W LY+ + +   V  ETA+RV+RRYLK+DP+Q E ++ F+++ G  +EAAV LA CVND  F S KG +KH LW+ LCD+  +H   ++  LKVDAIIR G+ RFTDE G+LW  LAD+YIR+G FERARDVYEE +++VLTVRDF++VFDAYSQ EES+L A++           E  +DL+ EG+  D DLR+ARLE LMERRP L+SSVLLRQNPHNVHEWHKR KLF    DP + I+ +TEAVKTVDP KA GK ++LW  FAK YE+H D+ NARV+L+KAT V +K VE+LA V+C WAEMEIR +N+++AL + + A  +P + +         GR   GG           A +PVQ R++KS ++WS + DLEESLG +A+T+  YER LEL++ATPQII+N+A+ LEE  Y E+AF+ YE+G++VF +PHVK +W+ YL KFVARYGG KLERARDLFEQ +EK P   A   Y+ YAKLEE++GLARHAMA+Y+R  +AV +  R   + +YI +    +G TRTR++Y+ AIE  LPD+  K MC+++A LE+KL EIDRARA+Y H +  ADPR DP FW++W DFEV +GNE+TFR+MLR+KR++  ++SQ+++
Sbjct:   10 LLPAEEDLLYEEEILRDPFSLKLWWRYLQARKDAPARKRRLLFERAIKALPGSYKLWHAYLSERKAAMRGQ-PLAHPGYEALNNTFERALVTMHKMPRIWLDYLGLLLEQRRITRARHTFDRALCSLPVTQHDRVWELYVRFIRQDAVPVETALRVYRRYLKFDPTQAEDFITFLQEKGHWQEAAVRLADCVNDPDFQSVKGKTKHQLWLELCDLVTKHAQQVTG-LKVDAIIRGGIRRFTDEVGRLWTSLADFYIRKGLFERARDVYEEGMASVLTVRDFSLVFDAYSQFEESMLAAKM-----------EAQEDLEPEGESPDVDLRIARLEALMERRPELVSSVLLRQNPHNVHEWHKRVKLFA--GDPTRQILTYTEAVKTVDPLKALGKPHTLWVDFAKLYEKHGDLPNARVILDKATQVGYKAVEDLAAVWCEWAEMEIRAQNFKQALALCRRATQQPPETL---------GRLPDGG-----------ADVPVQLRLYKSLKLWSFYCDLEESLGDLASTRRVYERILELRIATPQIIINYAALLEEAKYFEDAFQVYERGIAVFKYPHVKDIWTTYLTKFVARYGGKKLERARDLFEQAVEKAPPDAALPLYLAYAKLEEDYGLARHAMAVYERAVKAVADTARMQVYEIYIARAAEFFGATRTRDIYEAAIESGLPDKDVKAMCLKYAALEKKLQEIDRARAIYVHASQLADPRTDPAFWQEWNDFEVQYGNEDTFREMLRIKRSVSASYSQMHF 738          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|1143390999|ref|XP_019949920.1| (PREDICTED: pre-mRNA-splicing factor SYF1 isoform X2 [Paralichthys olivaceus])

HSP 1 Score: 864.759 bits (2233), Expect = 0.000e+0
Identity = 421/812 (51.85%), Postives = 575/812 (70.81%), Query Frame = 0
Query:   14 ALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMI-ASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEG--------GGEEKDEATADAETLAREAAKAEEKAK 815
             + ED+ D  +EEEI RNP+S+K W+RY+  K  A      +IYERALK LPGSYKLW++YL+ER++QV G+  ++ P Y+ + N  ERALV + +MPR+WLDY   LV   K T++RR FD AL++LP+TQH RIW LYL + + L + ETAIRV+RRYLK  P   E Y+D++  +G ++EAAV LA  VND++F S +G S + LW  LCD+ +++P  ++  L V AIIR GL RFTD+ GKLWC LADYYIR G FE+ARDVYEEA+ TV+TVRDFT VFD+Y+Q EES++ A++   AE  + E+   DD+D+E     LRLAR E L+ RRP+LL+SVLLRQNPHNVHEWHKR KL+    +P ++I  +TEAV+TVDP KA GK +SLW +FAK+YEE++ +D+AR +  KAT VN+K V++LA V+C + EME+RHENYE+AL++++ A   PS+                        +AE   AS PVQ RV+KS +VWS+  DLEESLG+  +TKA Y+R ++L++ATPQII+N+A FLEE+ Y EE+F+AYE+G+++F WP+V  +W+ YL KF+ RYGG KLERARDLFEQ L+  PA  A   Y+ YAKLEEE+GLARHAMA+Y+R TQAV   +R+  F +YIK+   +YGVT TR +YQKAIEVLPDE A++MC++F+++E KLGEIDRARA+Y++ +   DPR    FW+ W++FE+ HGNE+T R+MLR+KR++Q  + +QVN+M+   M  +    G        G ++       A+ LA EA + + K K
Sbjct:   10 VMFEDD-DLPYEEEIIRNPYSVKCWMRYIEFKQNASKSTLNMIYERALKELPGSYKLWYSYLRERRKQVKGKC-ITEPAYEEINNCHERALVFMHKMPRIWLDYCQFLVSQSKITRSRRTFDRALRALPVTQHPRIWPLYLRFVRTLSLPETAIRVYRRYLKLSPQNAEEYIDYLRSVGRLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTS-LNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEIGKDEE---DDIDLE-----LRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVKLYDG--NPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVNYKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSK------------------------KAEYFDASEPVQNRVYKSLKVWSMLADLEESLGSFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGIALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEEYGLARHAMAVYERATQAVETGERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHARDMCLRFSDMESKLGEIDRARAIYSYCSQICDPRVTATFWQAWKEFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMSSQMMKAITTTTGTDLAPGQMGIDDMKMLEQKAQQLAAEAEQDKPKPK 784          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|1143390997|ref|XP_019949919.1| (PREDICTED: pre-mRNA-splicing factor SYF1 isoform X1 [Paralichthys olivaceus])

HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 413/777 (53.15%), Postives = 562/777 (72.33%), Query Frame = 0
Query:   14 ALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMI-ASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEG 788
             + ED+ D  +EEEI RNP+S+K W+RY+  K  A      +IYERALK LPGSYKLW++YL+ER++QV G+  ++ P Y+ + N  ERALV + +MPR+WLDY   LV   K T++RR FD AL++LP+TQH RIW LYL + + L + ETAIRV+RRYLK  P   E Y+D++  +G ++EAAV LA  VND++F S +G S + LW  LCD+ +++P  ++  L V AIIR GL RFTD+ GKLWC LADYYIR G FE+ARDVYEEA+ TV+TVRDFT VFD+Y+Q EES++ A++   AE  + E+   DD+D+E     LRLAR E L+ RRP+LL+SVLLRQNPHNVHEWHKR KL+    +P ++I  +TEAV+TVDP KA GK +SLW +FAK+YEE++ +D+AR +  KAT VN+K V++LA V+C + EME+RHENYE+AL++++ A   PS+                        +AE   AS PVQ RV+KS +VWS+  DLEESLG+  +TKA Y+R ++L++ATPQII+N+A FLEE+ Y EE+F+AYE+G+++F WP+V  +W+ YL KF+ RYGG KLERARDLFEQ L+  PA  A   Y+ YAKLEEE+GLARHAMA+Y+R TQAV   +R+  F +YIK+   +YGVT TR +YQKAIEVLPDE A++MC++F+++E KLGEIDRARA+Y++ +   DPR    FW+ W++FE+ HGNE+T R+MLR+KR++Q  + +QVN+M+   M  +    G
Sbjct:   10 VMFEDD-DLPYEEEIIRNPYSVKCWMRYIEFKQNASKSTLNMIYERALKELPGSYKLWYSYLRERRKQVKGKC-ITEPAYEEINNCHERALVFMHKMPRIWLDYCQFLVSQSKITRSRRTFDRALRALPVTQHPRIWPLYLRFVRTLSLPETAIRVYRRYLKLSPQNAEEYIDYLRSVGRLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTS-LNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEIGKDEE---DDIDLE-----LRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVKLYDG--NPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVNYKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSK------------------------KAEYFDASEPVQNRVYKSLKVWSMLADLEESLGSFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGIALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEEYGLARHAMAVYERATQAVETGERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHARDMCLRFSDMESKLGEIDRARAIYSYCSQICDPRVTATFWQAWKEFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMSSQMMKAITTTTG 749          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|1108911728|ref|XP_010728663.2| (PREDICTED: pre-mRNA-splicing factor SYF1 [Larimichthys crocea] >gi|808882102|gb|KKF29534.1| Pre-mRNA-splicing factor SYF1 [Larimichthys crocea])

HSP 1 Score: 862.062 bits (2226), Expect = 0.000e+0
Identity = 415/777 (53.41%), Postives = 562/777 (72.33%), Query Frame = 0
Query:   14 ALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMI-ASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEG 788
             + ED+ D  +EEEI RNP+S+K W+RY+  K         +IYERALK LPGSYKLW+ YL+ER++QV G+  +S P Y+ + N  ERALV + +MPR+WLDY   LV   K T++R+ FD AL++LP+TQH RIW LYL + +NL + ETAIRV+RRYLK  P   E Y+D++  +G ++EAAV LA  VND++F S +G S + LW  LCD+ +++P  ++  L V AIIR GL RFTD+ GKLWC LADYYIR G FE+ARDVYEEA+ TV+TVRDFT VFD+Y+Q EES++ A++   AE  + EDE   D+D+E     LRLAR E L+ RRP+LL+SVLLRQNPHNVHEWHKR KL++   +P ++I  +TEAV+TVDP KA GK +SLW +FAK+YEE+D +D+AR +  KAT VN+K V++LA V+C + EME+RHENYE+AL++++ A   PS+                        +AE   AS PVQ RV+KS +VWS+  DLEESLGT  +TKA Y+R ++L++ATPQII+N+A FLEE+ Y EE+F+AYE+G+++F WP+V  +W+ YL KF+ RYGG KLERARDLFEQ L+  PA  A   Y+ YAKLEE +GLARHAMA+Y+R TQAV  ++R+  F +YIK+   +YGVT TR +YQKAIEVLPDE A++MC++FA++E KLGEIDRARA+Y++ +   DPR    FW+ W++FE+ HGNE+T R+MLR+KR++Q  + +QVN+M+   +    +  G
Sbjct:   10 VMFEDD-DLPYEEEIIRNPYSVKCWMRYIEFKQNGLKSTLNMIYERALKELPGSYKLWYNYLRERRKQVKGKC-ISEPGYEEVNNCHERALVFMHKMPRIWLDYCQFLVSQCKITRSRQTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTS-LNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEDE---DIDLE-----LRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVKLYEG--NPRQIINTYTEAVQTVDPMKATGKPHSLWVSFAKFYEENDQLDDARTIFEKATKVNYKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSK------------------------KAEYFDASEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGIALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEGYGLARHAMAVYERATQAVETEERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHARDMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQTWKEFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMSSQMLKATTSSTG 749          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|241836192|ref|XP_002415091.1| (pre-mRNA splicing factor Syf1, putative [Ixodes scapularis] >gi|215509303|gb|EEC18756.1| pre-mRNA splicing factor Syf1, putative [Ixodes scapularis])

HSP 1 Score: 862.062 bits (2226), Expect = 0.000e+0
Identity = 430/824 (52.18%), Postives = 569/824 (69.05%), Query Frame = 0
Query:   18 DEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEGGGEEKDEATADAETLAREAAKAEEKAKRAQAARVMAGGAGGVKRKGGSEGEE 840
            +E D  +EEEI RNPFS+K W+RY++ K         LI ERALK LPGSYKLW++YL+ R++QV   + ++ P Y+ + + FER+LV + +MPR+W+DY   L   +K T+TRR FD AL++LPITQH RIW LYL +     + ETA+RV+RRYLK  P   E +V++++++G +++AAV LA  VN + F S +G SKH LW  LC++ +++P  +   LKVDAIIR GL R+TD+ G+LW  LADYYIR   FERARD+YEEA+ TVLTVRDFT VFDAY+Q EES+L A++   A    P +E D DL++       RLAR EDLM+RRP+LL+SVLLRQNPHNVHEW KR KLF+ +  P ++I  FTEAV+T+DPK A GKL  LW +FAK+YEE+D I++AR++  KAT V F  VE+LA V+C W+EME+RHEN+E AL++MQ A   PS+ +    Q E                       PVQ RV+KS +VWSL+ DLEES GT  +TKA Y+R ++LK+ATPQII+N+  FLEEN Y EEAF+AYEKGV++F WP+V  +W+ YL KF+ RYGG+KLERARDLFEQCLE  PA  A   Y+ YAKLEEEHGLARHAMAIYDRG +AV  ++++  F +YI K   +YG+T TRE+Y++AIEVLPD  A+ MC++FA+LERKLGEIDRARA+Y H +   DPR    FW  W+DFEV+HGNE+T R+MLR+KR++Q  + +QVN+M    ++    +       +E   D+      AAK   +  R   AR M G      R G +E E+
Sbjct:   10 EEDDLPYEEEIIRNPFSVKHWMRYIDFKKDKSKDVINLICERALKELPGSYKLWYSYLKLRRQQVRD-LCITDPEYEDVNSAFERSLVFMHKMPRIWMDYCKFLTQQQKITRTRRVFDRALRALPITQHHRIWPLYLEFVNMHDIPETALRVYRRYLKLCPENAEEFVEYLKRIGRLDDAAVRLADIVNKEDFVSKEGKSKHQLWNELCELISKNPEKV-HSLKVDAIIRGGLRRYTDQIGQLWNSLADYYIRAALFERARDIYEEAIQTVLTVRDFTQVFDAYAQFEESVLCAKMEE-ASAARPSEENDLDLEI-------RLARFEDLMDRRPLLLNSVLLRQNPHNVHEWLKRVKLFEGK--PREIINTFTEAVQTIDPKLATGKLNILWVSFAKFYEENDQIEDARIIFEKATQVPFTKVEDLAHVWCEWSEMELRHENHEGALKLMQRATAMPSRKVAYHDQNE-----------------------PVQFRVYKSLKVWSLYADLEESFGTFKSTKAVYDRIIDLKIATPQIIINYGLFLEENNYFEEAFKAYEKGVALFKWPNVYDIWNTYLTKFLKRYGGTKLERARDLFEQCLESCPAKFAKSLYLLYAKLEEEHGLARHAMAIYDRGCKAVLPEEQFQMFNVYILKAAEIYGLTHTREIYERAIEVLPDNQARQMCVRFADLERKLGEIDRARAIYAHCSQICDPRVTADFWNTWKDFEVHHGNEDTMREMLRIKRSVQATYNTQVNFMTAQMLSATAREVAATGTTEEPAKDSMQQLEAAAKVLAEEARRDPAR-MPGKDILFVRGGTTEDEQ 797          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|390350970|ref|XP_003727542.1| (PREDICTED: pre-mRNA-splicing factor SYF1 isoform X1 [Strongylocentrotus purpuratus])

HSP 1 Score: 861.677 bits (2225), Expect = 0.000e+0
Identity = 423/792 (53.41%), Postives = 563/792 (71.09%), Query Frame = 0
Query:   13 RALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEGGGEEKDEATADAETL 803
            R L+ +E D  +EEEI R+PFS+K WLRY   K++  P   +LIYERALK LPGSYKLW+ YL+ R++ + GR  ++ P Y+ + N FERALV + +MPR+WLDY   L+D  K  +TRR FD AL+++PI+QH RIW LYL + +++ ++ETA+RV+RRYLK      E Y++++  +  ++E AV LA  VN +AF S +G S H LW  LCD+  +HPT ++  LKVD IIR G+ RF+DE GKLWC LADYYIR G FE+ARD+YEEA+ TV TVRDFT VFDAY+Q EES+L A++   AE    ED   DD+D+E     LRL R EDLM+RRP+LL+SVLLRQNPHNVHEWHKRAKLF+ +  P +VI  +TEAV+TV P+ A GKL++LW  FAK+YE+H  I  ARV+  K T V +  V+ELAGV+C WAEMEIRHENY+ AL++M             RR T A GR     K    +++E     PVQ R++K+ ++WS++ DLEES GT  +TKA Y+R ++L++ATPQII+N+  FLEEN Y EEAF+AYEKG+ +F WP+V  +W+ YL KF+ RYGG KLER RDLFEQCLE  P       Y+ YAKLEE++GL+RHA+A+YDR T+AV   ++++ F +YIK+V  +YGVT+TR +Y+KA+E+LPD  A+ MC++FA+LERKLGEIDRARAVY H +   DPR    FW+ W+DFE+ HGNE+T R+MLR+KR+IQ  F +QVN+M+    A + A EG  +    A  D + L
Sbjct:   10 RDLIFEEDDLAYEEEILRHPFSVKCWLRYTEHKSKGPPAGLHLIYERALKELPGSYKLWYNYLKLRRKAIKGRC-ITDPGYEDVNNAFERALVFMHKMPRIWLDYCQFLMDQCKVARTRRTFDRALRAMPISQHHRIWPLYLKFVRSMPLQETAVRVYRRYLKLCSENAEEYIEYLVDILRLDEGAVRLADIVNQEAFVSKEGKSNHQLWHDLCDLICKHPTKVTS-LKVDPIIRGGIKRFSDERGKLWCSLADYYIRSGHFEKARDIYEEAIFTVKTVRDFTQVFDAYAQFEESMLKAKMETSAESGSTED---DDIDIE-----LRLERFEDLMDRRPLLLNSVLLRQNPHNVHEWHKRAKLFEGK--PKEVINTYTEAVQTVTPQLATGKLHTLWVEFAKFYEKHSQIMEARVIFEKGTKVEYMKVDELAGVWCEWAEMEIRHENYDAALKLM-------------RRATAAPGR-----KAAYHDKSE-----PVQNRLYKNLKLWSMYADLEESFGTFKSTKAVYDRVIDLRIATPQIIINYGMFLEENQYFEEAFKAYEKGIGLFKWPNVYDIWNTYLTKFMERYGGKKLERTRDLFEQCLEDCPPKFTKTLYLLYAKLEEKYGLSRHAVAVYDRATKAVLPKEQHEMFNIYIKRVAEVYGVTQTRPIYEKAVEILPDIEAREMCLRFADLERKLGEIDRARAVYAHCSQMCDPRVTATFWQVWKDFEIKHGNEDTVREMLRIKRSIQAKFNTQVNFMS----AQMIAAEGAAKPNLAAVDDMQLL 762          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|908445051|ref|XP_013080345.1| (PREDICTED: pre-mRNA-splicing factor SYF1-like [Biomphalaria glabrata])

HSP 1 Score: 858.596 bits (2217), Expect = 0.000e+0
Identity = 419/807 (51.92%), Postives = 579/807 (71.75%), Query Frame = 0
Query:   16 LEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMIASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEGG-----GEEKDEATADAETLAREAAKAEEKAKR 816
            L +E+D  FEE+I RNP+++K WLRY+  K  AK      +YERALK LPGSYKLW+ YL+  + Q+ G+V V+ P Y+ + + FER+LV + +MPR+WLDYL  ++D  K T+TRR+FD AL++LPITQH RIW LYL + ++  + ETA+RV+RRYLK      E Y+ ++  +G ++EAA  LA  +ND++F S +G SKH LW +LC++ A++P  ++  LKV+ IIR GL R+TD+ G LW  LADYYIR G FERARD+YEEA+ TV+TVRDFT VFDA +Q E+S++ A++  + EE   E+   DDL++E     +RLARLEDLM+RRP+LL+SVLLRQNPHNVHEWHKR  LF+ +  P ++I  +TEAV+TVDPK A GK ++LW  FA++YE++D I++AR+V  KAT V +K V++LA V+C WAEME+RH N EEAL++MQ A T   + +    +TE                        VQ RVHKS +VWSL+ DLEES GT  + K+ Y++ ++L++ATPQII+N+A FLEEN Y EEAF+AYEKG+++F WP+V  LW+ YL KF+ RY G+KLERARDLFEQCLEK P   A + Y+ YAKLE EHG+ARHAMA+YDR T+AV  +++Y  F +YIKK   +YGVT TR +Y+KAIEVLP++ A+ MC++FA+LE+KLGEIDRA+A+Y HG+  +DPR  P FW+ W++FE+NHGNE+T R+MLR+KR++Q  + +QVN+M+   +A    K+       G E  +  A A  LA+E+ K + +A++
Sbjct:   10 LFEEEDLPFEEDILRNPYNVKCWLRYIEHKKDAKKEILNTVYERALKQLPGSYKLWYNYLKLLRSQIRGKV-VTDPAYEEVNSAFERSLVFMHKMPRIWLDYLHFIMDQGKITRTRRSFDCALRALPITQHCRIWPLYLKFVRSYDLPETAVRVYRRYLKLQKEGSEEYIGYLISIGWLDEAAQRLADVINDESFVSVEGKSKHQLWNQLCELIAKNPDKVTS-LKVEPIIRQGLKRYTDQIGVLWNSLADYYIRGGHFERARDIYEEAIQTVITVRDFTQVFDACAQFEKSMIAAKMETMEEEGASEE---DDLELE-----VRLARLEDLMDRRPLLLNSVLLRQNPHNVHEWHKRVTLFEGK--PREIINTYTEAVQTVDPKLASGKPHTLWVEFAQFYEKNDQIEDARIVFEKATQVPYKHVDDLACVWCEWAEMELRHNNSEEALKLMQRATTPLKRQVAYHDETET-----------------------VQTRVHKSLKVWSLYADLEESFGTFKSCKSVYDKIIDLRIATPQIIMNYAMFLEENNYFEEAFKAYEKGIALFKWPNVYDLWNTYLNKFITRYEGTKLERARDLFEQCLEKCPEKYAKEIYLLYAKLEMEHGMARHAMAVYDRATRAVLPEEQYKMFNIYIKKAAEVYGVTHTRTIYEKAIEVLPNDQAREMCLRFADLEKKLGEIDRAQAIYAHGSQISDPRVAPQFWESWKEFEINHGNEDTVREMLRIKRSVQATYNTQVNFMSAQMLAAQTKKQDNINLEEGNEMQQLEARARQLAQESLKEKAQAEK 781          
BLAST of EWM27861.1 vs. NCBI_GenBank
Match: gi|348509202|ref|XP_003442140.1| (PREDICTED: pre-mRNA-splicing factor SYF1 [Oreochromis niloticus])

HSP 1 Score: 858.596 bits (2217), Expect = 0.000e+0
Identity = 412/777 (53.02%), Postives = 560/777 (72.07%), Query Frame = 0
Query:   14 ALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLDTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDDTDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGVEELAGVYCTWAEMEIRHENYEEALQVMQHAVTEPSQAIQRRRQTEAQGRALGGGKKGGEERAEMI-ASIPVQERVHKSTRVWSLFLDLEESLGTVATTKAAYERCLELKVATPQIILNFASFLEENAYHEEAFRAYEKGVSVFGWPHVKPLWSLYLQKFVARYGGSKLERARDLFEQCLEKVPAVEAADFYIRYAKLEEEHGLARHAMAIYDRGTQAVPEDKRYDFFLLYIKKVEALYGVTRTREVYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGFWKKWQDFEVNHGNEETFRDMLRVKRTIQTAF-SQVNYMADDAMAMVQAKEG 788
             + ED+ D  +EEEI RNP+S+K W+RY+  K         +IYERALK LPGSYKLW+ YL+ER++QV G+  ++ P Y+ + N  ERALV + +MPR+W+DY   LV   K T++RR FD AL++LP+TQH RIW LYL + ++L + ETAIRV+RRYLK  P   E Y+D++  +G ++EAAV LA  VND+ F S +G S + LW  LCD+ +++P  ++  L V AIIR GL RFTD+ GKLWC LADYYIR G FE+ARDVYEEA+ TV+TVRDFT VFD+Y+Q EES++ A++   AE  + E+   DD+D+E     LRLAR E L+ RRP+LL+SVLLRQNPHNVHEWHKR KL+    +P ++I  +TEAV+T+DP KA GK +SLW  FAK+YEE++ +D+AR +  KAT VN+K V++LA V+C + EME+RHENYE+AL++++ A   PS+                        +AE   AS PVQ RV+KS +VWS+  DLEESLGT  +TKA Y+R ++L++ATPQII+N+A FLEE+ Y EE+F+AYE+G+++F WP+V  +W+ YL KF+ RYGG KLERARDLFEQ L+  PA  A   Y+ YAKLEEE+GLARHAMA+Y+R TQAV  ++R+  F +YIK+   +YGVT TR +YQKAIEVLPDE A++MC++FA++E KLGEIDRARA+Y++ +   DPR    FW+ W+DFE+ HGNE+T R+MLR+KR++Q  + +QVN+M+   +    +  G
Sbjct:   10 VIFEDD-DLPYEEEIIRNPYSVKCWMRYIEFKQNGPKSTLNMIYERALKELPGSYKLWYNYLRERRKQVKGKC-ITEPAYEEVNNCHERALVFMHKMPRIWMDYCQFLVSQCKITRSRRTFDRALRALPVTQHPRIWPLYLRFVRDLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAVRLAAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTS-LNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQDEN---DDIDLE-----LRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVKLYDG--NPRQIINTYTEAVQTIDPMKATGKPHSLWVFFAKFYEENEQLDDARTIFEKATKVNYKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSK------------------------KAEYFDASEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGIALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEEYGLARHAMAVYERATQAVETEERHLMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHARDMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQTWKDFEIRHGNEDTIREMLRIKRSVQATYNTQVNFMSSQMLKATTSSTG 749          
The following BLAST results are available for this feature:
BLAST of EWM27861.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110190|gb|EWM27861.1|0.000e+0100.00pre-mrna-splicing factor syf1 [Nannochloropsis gad... [more]
gi|553192014|ref|XP_005855497.1|0.000e+087.86pre-mRNA-splicing factor SYF1 [Nannochloropsis gad... [more]
gi|971506788|dbj|GAQ91417.1|0.000e+055.10tetratricopeptide repeat like superfamily protein ... [more]
gi|1143390999|ref|XP_019949920.1|0.000e+051.85PREDICTED: pre-mRNA-splicing factor SYF1 isoform X... [more]
gi|1143390997|ref|XP_019949919.1|0.000e+053.15PREDICTED: pre-mRNA-splicing factor SYF1 isoform X... [more]
gi|1108911728|ref|XP_010728663.2|0.000e+053.41PREDICTED: pre-mRNA-splicing factor SYF1 [Larimich... [more]
gi|241836192|ref|XP_002415091.1|0.000e+052.18pre-mRNA splicing factor Syf1, putative [Ixodes sc... [more]
gi|390350970|ref|XP_003727542.1|0.000e+053.41PREDICTED: pre-mRNA-splicing factor SYF1 isoform X... [more]
gi|908445051|ref|XP_013080345.1|0.000e+051.92PREDICTED: pre-mRNA-splicing factor SYF1-like [Bio... [more]
gi|348509202|ref|XP_003442140.1|0.000e+053.02PREDICTED: pre-mRNA-splicing factor SYF1 [Oreochro... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2817rna2817Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications