EWM27866.1, cds2805 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|585110196|gb|EWM27866.1| (hypothetical protein Naga_100094g3 [Nannochloropsis gaditana]) HSP 1 Score: 1288.09 bits (3332), Expect = 0.000e+0 Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0
Query: 1 MSAQLLDHQGKDGKSYGAVAISSPRVDLNSKELSWQPSIRDLPAARPTRTNSCDNAGKAFTASGMPPVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKKASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEEEEEGDLLERDEEAAAEEEESRRRMWGARRGKRKERRSEEGRGTSGGMTWLTAWLGLRRGKEDGGSEEEEEEEGGGGEERRKEDGKVLFGPLPEELAASGAALMEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRWGWW 629
MSAQLLDHQGKDGKSYGAVAISSPRVDLNSKELSWQPSIRDLPAARPTRTNSCDNAGKAFTASGMPPVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKKASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEEEEEGDLLERDEEAAAEEEESRRRMWGARRGKRKERRSEEGRGTSGGMTWLTAWLGLRRGKEDGGSEEEEEEEGGGGEERRKEDGKVLFGPLPEELAASGAALMEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRWGWW
Sbjct: 1 MSAQLLDHQGKDGKSYGAVAISSPRVDLNSKELSWQPSIRDLPAARPTRTNSCDNAGKAFTASGMPPVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKKASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEEEEEGDLLERDEEAAAEEEESRRRMWGARRGKRKERRSEEGRGTSGGMTWLTAWLGLRRGKEDGGSEEEEEEEGGGGEERRKEDGKVLFGPLPEELAASGAALMEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRWGWW 629
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|553195452|ref|XP_005856150.1| (hypothetical protein NGA_0249010 [Nannochloropsis gaditana CCMP526] >gi|422292917|gb|EKU20218.1| hypothetical protein NGA_0249010 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1072.77 bits (2773), Expect = 0.000e+0 Identity = 528/533 (99.06%), Postives = 530/533 (99.44%), Query Frame = 0
Query: 1 MSAQLLDHQGKDGKSYGAVAISSPRVDLNSKELSWQPSIRDLPAARPTRTNSCDNAGKAFTASGMPPVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKKASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEEEEEGDLLERDEEAAAEEEESRRRMWGARRGKRKERRSEEGRGTSGGMTWLTAWLGLRRGKEDGGSEEEEEEEGGGGEERRKEDGKVLFGPLPEELAASGAALMEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLIL 533
MSAQLLDHQGKDGKSYGAVAISSPRVDLNSKELSWQPSIRDLPAARPTRTNSCDNAGKAFTASGMPPVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKKASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEEEEEGDLLERDEEAAAEEEESRRRMWGARRGKRKERRSEEGRGTSGGMTWLTAWLGLRRGKEDGGSEEEEEEEGGGGEERRKEDGKVLFGPLPEELAASGAALMEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHP I ++
Sbjct: 1 MSAQLLDHQGKDGKSYGAVAISSPRVDLNSKELSWQPSIRDLPAARPTRTNSCDNAGKAFTASGMPPVTPAAASPQRIPRTHRSWVTVRVVSGIIMFSMIGNIIRIELERYIIQLDARQGNIKSSMYPSILANLLGCFIMGLLYECRGFLERHLHGILSFPSMPDASSLYVAITTWMCGSITTYSGWNSVVAHRMVYDSFTYGIFSAMTGAATAYLALLHGMDVGSGFTRVQLVEDTDKKASPPSLPSPPADSSSLSISVASPRQSPSGLTHLPSGPLPEEEEEGDLLERDEEAAAEEEESRRRMWGARRGKRKERRSEEGRGTSGGMTWLTAWLGLRRGKEDGGSEEEEEEEGGGGEERRKEDGKVLFGPLPEELAASGAALMEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPAIAQLI 533
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|553192026|ref|XP_005855500.1| (hypothetical protein NGA_0249020 [Nannochloropsis gaditana CCMP526] >gi|422293558|gb|EKU20858.1| hypothetical protein NGA_0249020 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 296.59 bits (758), Expect = 1.449e-94 Identity = 145/150 (96.67%), Postives = 147/150 (98.00%), Query Frame = 0
Query: 384 MEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLIL 533
MEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHP I ++
Sbjct: 1 MEPHRYISPERKPVSRPTNSASSASSYSRPLGQQGGGREGGSEAGREGGGIQMQAQPPGFNPTEDDDDVEYSIYSFRKPNQRDAFILGEVSFYTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPAIAQLI 150
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|330930625|ref|XP_003303100.1| (hypothetical protein PTT_15161 [Pyrenophora teres f. teres 0-1] >gi|311321136|gb|EFQ88802.1| hypothetical protein PTT_15161 [Pyrenophora teres f. teres 0-1]) HSP 1 Score: 85.8853 bits (211), Expect = 7.010e-14 Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 0
Query: 504 LSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLG-ATLSAFFD----TIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRW--GW 628
+C+FAPLGA LRY L+L M + + PHFPL TFT NVLG A L FD + G I++A++ GF GCL+T ST+ +EL LP HA+ Y + + A+ +I+ S RW GW
Sbjct: 437 FACVFAPLGAILRYYLSLHM------NPLSPHFPLGTFTVNVLGTAVLGMAFDLQHVQLSSTGLVGGGLLGCQILQAIMDGFCGCLTTVSTWIVELDSLPRGHAYAYGGGSVVAGLALLLVIMGSVRWTLGW 562
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|1063248217|gb|ODQ70720.1| (hypothetical protein LIPSTDRAFT_5482 [Lipomyces starkeyi NRRL Y-11557]) HSP 1 Score: 83.5741 bits (205), Expect = 2.616e-13 Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 0
Query: 508 FAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRT-AHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRW 626
F PLG R++L+ M +P + P FPL TFTAN+LG L F +++ R DGR +++ ++ G+ GCL+T STFALEL L HAW+Y + + + L I W
Sbjct: 349 FGPLGTLTRWILSRYM--NP----LRPSFPLGTFTANILGTVLIGIF----AIIQQRVDGRVGCQVLRGMMDGYCGCLTTVSTFALELQTLQRSHAWRYGSTSVVVGVIVMCLTIGVDHW 458
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|1066290285|ref|XP_018033183.1| (hypothetical protein CC84DRAFT_1219764 [Paraphaeosphaeria sporulosa] >gi|1027142365|gb|OAG02818.1| hypothetical protein CC84DRAFT_1219764 [Paraphaeosphaeria sporulosa]) HSP 1 Score: 82.8037 bits (203), Expect = 6.880e-13 Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = 0
Query: 504 LSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLG-ATLSAFFD---TIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRW--GW 628
+C+FAPLG LR+ ++L + + I P FPL TF N+ G A L +D I G +++ ++ GFDGCL+T ST+ LE+ L HAWKYA A+ + +++ S RW GW
Sbjct: 439 FACVFAPLGCLLRFYVSLKL------NPISPSFPLGTFVVNIFGTAVLGMAYDLQHVQIGGSGVGGGRAGCQVLQGIMDGFDGCLTTVSTWILEIDTLKRSHAWKYAFASIAAGICVLVMVMGSVRWSVGW 563
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|1183395464|gb|ORY20401.1| (CRCB-domain-containing protein [Neocallimastix californiae]) HSP 1 Score: 79.337 bits (194), Expect = 1.974e-12 Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0
Query: 478 AGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGA-TLSAFFDTIIPVLKDRGDGRTAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASH--RWGW 628
+G G+ +AAI I T+ + W+SCL AP GA LRY+L+ + FP+ TF AN++G L FF I D+ D H + A+ GF GCL+T STF EL+ L T++ + Y L T+ A+AQ+++ +GW
Sbjct: 169 SGLTGVAMMAAI-ILTIFDGDNRKIWISCLLAPFGACLRYLLSFRNSMFT-------DFPMGTFLANIVGTLCLGIFF--IFRFAFDQKD-FLCHFLVAVGDGFCGCLTTISTFINELNSLNTKNLYVYCL----TSVAVAQIVLCFSFGFYGW 307
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|1183356847|gb|ORX84432.1| (hypothetical protein BCR32DRAFT_266305 [Anaeromyces robustus]) HSP 1 Score: 78.1814 bits (191), Expect = 4.103e-12 Identity = 45/129 (34.88%), Postives = 69/129 (53.49%), Query Frame = 0
Query: 503 WLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGA-TLSAFFDTIIPVLKDRGDGR--TAHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRWGW 628
W+SC+ AP GA LRY+L+ + +P +FPL TF AN++G L FF + + D + H + A+ GF GCL+T STF E+ L T++ + Y + + T Q + L+I +GW
Sbjct: 187 WISCILAPFGACLRYILSFRNSMYP-------NFPLGTFLANIIGTLCLGIFF-----IFRFAFDKKEFLCHFLIAVADGFCGCLTTISTFINEIVSLNTKYLYFYCIVSIATAQIV--LLITFGFYGW 301
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|729713858|emb|CEI89867.1| (hypothetical protein RMCBS344292_04210 [Rhizopus microsporus]) HSP 1 Score: 73.1738 bits (178), Expect = 3.736e-11 Identity = 43/126 (34.13%), Postives = 75/126 (59.52%), Query Frame = 0
Query: 504 LSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRT---AHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRW 626
L+C+FAP GA LR+VL+ + ++H + F + TFTAN+LG + A ++ +L+ T ++++AL GF GCL+T STF +EL+ LP +++ Y +++ + Q +I+ S+ W
Sbjct: 69 LACVFAPAGAILRWVLSF---YNSSLHSL---FLVGTFTANILGTIILA----VLSLLQSGAIIMTPTKCYVLQALADGFCGCLTTISTFMVELNALPLVNSYIYGISSVVVGQCFMFVILGSYIW 184
BLAST of EWM27866.1 vs. NCBI_GenBank
Match: gi|729700646|emb|CEJ02367.1| (hypothetical protein RMCBS344292_16374 [Rhizopus microsporus]) HSP 1 Score: 73.1738 bits (178), Expect = 9.406e-11 Identity = 45/154 (29.22%), Postives = 81/154 (52.60%), Query Frame = 0
Query: 476 YTAGAAGLLALAAIKIKTVESSEMEPRWLSCLFAPLGAALRYVLALAMAQHPTIHLILPHFPLQTFTANVLGATLSAFFDTIIPVLKDRGDGRT---AHIMKALLVGFDGCLSTYSTFALELHKLPTQHAWKYALATFITTQAIAQLIIASHRW 626
Y + G+L + + + L+C+FAP GA LR+VL+ + ++ L+ TFTAN+LG + A ++ +L+ T ++++AL GF GCL+T STF +EL+ LP +++ Y +++ + Q +I+ S+ W
Sbjct: 95 YLVISFGILCWIGVIFAAIFGKSQKELALACVFAPAGALLRWVLSFYNSSLYSLFLV------GTFTANILGTIILA----VLSLLQSGAIIMTPTKCYVLQALADGFCGCLTTISTFMVELNALPLVNSYIYGVSSVVVGQCFMFVILGSYIW 238 The following BLAST results are available for this feature:
BLAST of EWM27866.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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