EWM27868.1, cds2801 (CDS) Nannochloropsis gaditana

Overview
NameEWM27868.1
Unique Namecds2801
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1288537..1288606 +
Alignment locationCM002459.1:1288752..1290382 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27868.1
ProductDHBP synthase RibB-like alpha/beta domain protein
Orig transcript idgnl|cribi|Naga_100094g7.6803.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1288537..1288606 +
CM002459.1supercontigCM002459.1:1288752..1290382 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003725double-stranded RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017945DHBP_synth_RibB-like_a/b_dom
IPR005145SUA5
IPR006070YrdC-like_dom
Homology
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|585110198|gb|EWM27868.1| (DHBP synthase RibB-like alpha/beta domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1150.19 bits (2974), Expect = 0.000e+0
Identity = 566/566 (100.00%), Postives = 566/566 (100.00%), Query Frame = 0
Query:    1 MRLGLLACTRLNVLTYSICCFLARSPCAKAVPIICNTVNHRLLHSSLRISSWRDGSFFRRSVGLAFTVSSLNHSSYLYRRHSVFVAALLASSPTRSTATPIRVKPPLPLNLLASDKMTVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAAGPFLVSP 566
            MRLGLLACTRLNVLTYSICCFLARSPCAKAVPIICNTVNHRLLHSSLRISSWRDGSFFRRSVGLAFTVSSLNHSSYLYRRHSVFVAALLASSPTRSTATPIRVKPPLPLNLLASDKMTVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAAGPFLVSP
Sbjct:    1 MRLGLLACTRLNVLTYSICCFLARSPCAKAVPIICNTVNHRLLHSSLRISSWRDGSFFRRSVGLAFTVSSLNHSSYLYRRHSVFVAALLASSPTRSTATPIRVKPPLPLNLLASDKMTVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAAGPFLVSP 566          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|553195458|ref|XP_005856152.1| (sua5 family protein [Nannochloropsis gaditana CCMP526] >gi|422292919|gb|EKU20220.1| sua5 family protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0
Query:  117 MTVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAAGPFLVSP 566
            MTVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAAGPFLVSP
Sbjct:    1 MTVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAAGPFLVSP 450          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|673020262|ref|XP_008864092.1| (Sua5/YciO/YrdC/YwlC family protein [Aphanomyces invadans] >gi|574481006|gb|ETW07999.1| Sua5/YciO/YrdC/YwlC family protein [Aphanomyces invadans])

HSP 1 Score: 263.462 bits (672), Expect = 1.322e-79
Identity = 167/418 (39.95%), Postives = 225/418 (53.83%), Query Frame = 0
Query:  142 RAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHS--LLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQ 557
            RAG+ LR G LVAFPTETVYGLGANA+  K++  IFE KGRPLTDPLIVH+  +++A ++                          E   K   +  TLA AFWPGPLTL+APA  A+P  V+A TG+VG+R+P+HS+A+ALLR A VPV APSANRFGHVSPT+A HV  DLG +S  L ++      + G   C++GIESTVAK+   + ++ + R G V+ + L   L      V  + H                  D++  +    D +      Q+APGQ L HYAPD PT+++       +  D      V++D  G+LQ L+ + A Y+DLS  GD+ EAA  +F ALRWAE V              +LI D+    +              E A AL DR+ R++SG 
Sbjct:   12 RAGESLRQGRLVAFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHIPTVDDALAL-------------------------VELDDKGTAMFKTLATAFWPGPLTLIAPAIPALPREVSANTGFVGLRIPNHSIAQALLREAKVPVAAPSANRFGHVSPTTAQHVVNDLGTYSGGLEVID-----NVGHPCCQVGIESTVAKLVPDQNQLLVFRRGGVSEAALHDVL-----NVQQRLHV-----------------DIVYAQRVVADHSTQN---QVAPGQLLTHYAPDVPTFMVDT-TPVAAPADADVRTWVVVDFHGQLQALQPVVAAYLDLSPPGDITEAARNVFDALRWAEQVPNATR---------ILIPDVSAVAH--------------EHAAALHDRLFRASSGN 350          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|813114047|ref|XP_012195360.1| (hypothetical protein SPRG_01602 [Saprolegnia parasitica CBS 223.65] >gi|641539825|gb|KDO33620.1| hypothetical protein SPRG_01602 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 263.077 bits (671), Expect = 2.184e-79
Identity = 172/421 (40.86%), Postives = 223/421 (52.97%), Query Frame = 0
Query:  142 RAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGH--SLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALR---GKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQ 557
            RAG  LRAG LVAFPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV  +++A  +                          E  +    L  TLA AFWPGPLTL+APA  A+P  V+A TG+VG+R+P+H +A+ALL AA VPV APSANRFGHVSPT+A HV  DLG +   L ++        G   CE+GIESTVAK+   E ++ + R G V+ + L   L    G G+E+V                             R  D  + +N  Q+APGQ L HYAPD  T++L    +T S V       V+LD  GRL  ++   A Y+DLS +GD+  AA  +F +LRWAE V G            ++I D+                   E A AL DR+ R++SG+
Sbjct:   12 RAGQELRAGRLVAFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPSVQKALEL-------------------------VELNETGVHLFKTLATAFWPGPLTLIAPAIPALPREVSANTGFVGIRIPNHPIAKALLEAAQVPVAAPSANRFGHVSPTTAQHVINDLGAYPGGLHVIDNT-----GASCCEVGIESTVAKLVPDEKKLLVFRRGGVSEAALHHVLNATMGLGIEIVYAQ--------------------------RVVDDHSTQN--QVAPGQLLTHYAPDVETFMLEPSSSTTS-VTPAMKTWVVLDFHGRLAAVQPHVAGYLDLSASGDILAAAHVVFDSLRWAEQVHGATR---------IVIPDV--------------SAVPQEHAPALHDRLFRASSGK 350          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|1173952368|gb|OQS00077.1| (hypothetical protein THRCLA_06252 [Thraustotheca clavata])

HSP 1 Score: 262.692 bits (670), Expect = 2.914e-79
Identity = 174/438 (39.73%), Postives = 233/438 (53.20%), Query Frame = 0
Query:  130 PTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGH--SLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGK-GVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQAT-------ESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQ 557
            PTI+      + RAG  LRAG LV+FPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV  ++ A  +                      V   E+G K   L  TLA AFWPGPLTL+APA  A+P  V+A TG+VG+R+P+H +A +LL  A VPV APSANRFGHVSPT+A HV  DLG +   L ++      ++G   C++GIESTVAK+     ++ I R G V+ + L++ L  + G+++                       D++  +    D +      Q+APGQ L HYAPD  TY+L  L  +       +SW        VILD  G L  LK   A Y+DLS  GD+ +AA  +F +LRWAE V G            +LI D+ +  +              E A AL DR+ R++SG+
Sbjct:    5 PTIDG-----LARAGQELRAGRLVSFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPTVDAALKL----------------------VELDEKGTK---LFKTLAKAFWPGPLTLIAPAVPALPREVSANTGFVGIRIPNHPIALSLLTEAKVPVAAPSANRFGHVSPTTAQHVINDLGSYHGGLHVID-----NSGSSCCQVGIESTVAKLVPENNQLLIFRRGGVSEAALDNVLNKRLGMKI-----------------------DIVYAQRVVADHSTQN---QVAPGQLLTHYAPDVETYMLEPLTVSPTPTAQMKSW--------VILDFRGALAHLKPHVAGYLDLSTTGDIAQAAHVVFDSLRWAEQVPGATR---------ILIPDVSKVHH--------------EHASALHDRLYRASSGK 350          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|669160824|ref|XP_008615974.1| (hypothetical protein SDRG_11703 [Saprolegnia diclina VS20] >gi|530732406|gb|EQC30648.1| hypothetical protein SDRG_11703 [Saprolegnia diclina VS20])

HSP 1 Score: 262.692 bits (670), Expect = 3.207e-79
Identity = 175/428 (40.89%), Postives = 228/428 (53.27%), Query Frame = 0
Query:  142 RAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGH--SLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALR---GKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQA-------TESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQ 557
            RAG  LRAG LVAFPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV  +++A  +                      V   E G     L  TLA AFWPGPLTL+APA  A+P  V+A TG+VG+R+P+H +A+ALL AA VPV APSANRFGHVSPT+A HV  DLG +   L ++      + G   CE+GIESTVAK+   E ++ + R G V+ + L   L    G G+EVV   HA+                       R  D  + +N  Q+APGQ L HYAPD  T++L    +        ++W        V+LD  GRL  L+   A Y+DLS +G++  AA  +F +LRWAE V G            ++I D+                   E A AL DR+ R++SG+
Sbjct:   12 RAGQELRAGRLVAFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPSVQKALEL----------------------VELNESGVH---LFKTLATAFWPGPLTLIAPAIPALPREVSANTGFVGIRIPNHPIAKALLEAAQVPVAAPSANRFGHVSPTTAQHVINDLGAYPGGLHVID-----NTGASCCEVGIESTVAKLVPEEKKLLVFRRGGVSEAALHHVLNETFGLGIEVV---HAQ-----------------------RVVDDHSTQN--QVAPGQLLTHYAPDVETFMLEPSSSPPSVTPEMKTW--------VVLDFHGRLTALQPHVAGYLDLSASGNILAAAHVVFDSLRWAEQVSGATR---------IVIPDV--------------SAVQQEHAPALHDRLFRASSGK 350          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|698782427|ref|XP_009824257.1| (Sua5/YciO/YrdC/YwlC family protein [Aphanomyces astaci] >gi|574120307|gb|ETV85785.1| Sua5/YciO/YrdC/YwlC family protein [Aphanomyces astaci])

HSP 1 Score: 256.529 bits (654), Expect = 7.455e-77
Identity = 164/428 (38.32%), Postives = 232/428 (54.21%), Query Frame = 0
Query:  142 RAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGH--SLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALR-GKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLSALQA---------TESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQ 557
            RAG+ LR G LVAFPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV  +++A ++                    VE+ A     K  ++  TLA AFWPGPLTL+APA A++P  V+A TG+VG+R+P+H +A+ALL  A VPV APSANRFGHVSPT+A HV  DLG +   L ++      + G   C++GIESTVAK+   + ++ + R G V+ + L   L   +G+++ +                      V  +++  +  T +    Q+APGQ L HYAPD PT++++++             +W        VI+D   RL+ L+ + A Y+DLS  G + +AA  +F ALRWAE V              +LI D+                   E A AL DR+ R++SG+
Sbjct:   12 RAGESLRQGRLVAFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPTVDDALAL--------------------VELDA-----KGTEMFQTLATAFWPGPLTLIAPAIASLPREVSANTGFVGLRIPNHPIAQALLHEARVPVAAPSANRFGHVSPTTAQHVIDDLGTYHGGLQVIN-----NVGHPCCQVGIESTVAKLVPDQNQLLVFRRGGVSEAALHDVLNVQRGLDIAI----------------------VYAQKVVADHSTQN----QVAPGQLLTHYAPDVPTFMVNSIPTPTTTPNPSDIHTW--------VIIDFNRRLRALQPMVAAYLDLSPLGSIADAAHHVFDALRWAEQVPHATR---------ILIPDV--------------SAVPQEHAAALHDRLFRASSGK 352          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|1173943397|gb|OQR92256.1| (hypothetical protein ACHHYP_03913 [Achlya hypogyna])

HSP 1 Score: 256.144 bits (653), Expect = 7.724e-77
Identity = 172/433 (39.72%), Postives = 223/433 (51.50%), Query Frame = 0
Query:  142 RAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGH--SLLILKEKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALR---GKGVEV-----VVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLL-------SALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQ 557
            RAG  LRAG LV+FPTETVYGLGANA+  K++  IFE KGRPLTDPLIVHV  ++ A ++                          E   K   L  TLA AFWPGPLTL+APA  A+P  V+A TG+VG+R+P+H +A+ALL  A VPV APSANRFGHVSPT+A HV  DLG +   L ++      + G   CE+GIESTVAK+   E ++ + R G V+ + L   L    G G+E+     VV  H+ Q                                  Q+APGQ L HYAPD  T++L       +   A ++W        V+LD   RL  L+   A Y+DLS AG V +AA  +F +LRWAE V+G            +LI D+                   E A AL DR+ R++SG+
Sbjct:   12 RAGAELRAGRLVSFPTETVYGLGANAFDAKALLSIFEAKGRPLTDPLIVHVPTVDAALAL-------------------------VELDDKGVRLFKTLAKAFWPGPLTLIAPAIPALPREVSANTGFVGIRIPNHPIAKALLEEAKVPVAAPSANRFGHVSPTTAQHVINDLGAYPGGLHVID-----NVGASCCEVGIESTVAKLMPAENQLLVFRRGGVSEAALHHTLNETMGLGIEIIYAQRVVADHSTQN---------------------------------QVAPGQLLTHYAPDVETFMLEPEAVAPAPTPAMKTW--------VVLDFNKRLVSLQPHVAGYLDLSPAGVVVDAANIVFDSLRWAEQVEGATR---------ILIPDV--------------SSVPQEHAPALHDRLYRASSGK 350          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|1013934637|gb|KYQ88349.1| (hypothetical protein DLAC_11049 [Dictyostelium lacteum])

HSP 1 Score: 258.455 bits (659), Expect = 2.473e-76
Identity = 176/511 (34.44%), Postives = 251/511 (49.12%), Query Frame = 0
Query:   67 TVSSLNHSSYLYRRHSVFVAALLASSPTRSTATPIRVKPPLPLNLLASDKMTVSTSASTSSSP---PTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILK-EKEEHHAGQGACEIGIESTVAKVDAREGRVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLL-----------SALQATESWVDLLAGRAVI-LDMGGRLQR--LKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASGQAA 559
            T  S+N   YL+  ++  +  L     TR     I + P +   +  ++     +SA  +      PTI+     ++  AG  ++ GGLVAFPTETVYGLGANA  + +V  IF  KGRPLTDP+IVH+  +E A ++                          +   K+K++ + LA  +WPGPLT+VA A+  IP  VTA TG+VGVR P H +A++L+R + +P+ APSANRFGHVSPT A HV  DLG   + I+  +  EH   Q  CE GIESTV K  + +  + ILR G V+ S L + L     ++                         +    +T  +T  EN  Q APGQ + HYAPD  TY+L           S+  +      ++  +  I +D GG+L    LK     Y DLSE  ++ EAA  LF  LRW+ES+   K         ++L+ DL     +     KT +  +A F     DRI R++SG+ A
Sbjct:   15 TTKSIN---YLFNSNNYNIKYL----NTRHNNFEIFINPLMEYTITTNNHSNNHSSAFNAKCKIVKPTID-----NLKEAGRKIQQGGLVAFPTETVYGLGANALDKDAVLSIFTCKGRPLTDPVIVHIVDVEYAHTLL-------------------------DLTDKQKEIFNILAQEYWPGPLTMVAKASQLIPMIVTANTGYVGVRYPRHVIAQSLIRDSGLPIAAPSANRFGHVSPTRALHVHDDLGHSPITIIDTDDSEHSHSQPPCEFGIESTVLKFKS-DNELIILRKGGVSESSLRTTLSKISRDI------------------------NLTTITKTVSMTTKEN--QEAPGQLITHYAPDIQTYILDQDTNTSNHNNSSTDSNNEIKQIIPIKDCIYIDFGGQLNNPTLKSQFLAYKDLSETSNILEAANQLFSLLRWSESISTAK---------VILLPDL-----KNSLHFKTFDHSEAVF-----DRIFRASSGKFA 442          
BLAST of EWM27868.1 vs. NCBI_GenBank
Match: gi|1210524262|dbj|GAX16991.1| (hypothetical protein FisN_5Hh370 [Fistulifera solaris])

HSP 1 Score: 253.832 bits (647), Expect = 1.975e-75
Identity = 171/444 (38.51%), Postives = 235/444 (52.93%), Query Frame = 0
Query:  118 TVSTSASTSSSPPTIEAELTSDVDRAGDYLRAGGLVAFPTETVYGLGANAYLEKSVRRIFEVKGRPLTDPLIVHVAQIEEAWSVFACGGNTTYHHAASNNSVPHVEVRAAEEGKKEKDLLSTLAHAFWPGPLTLVAPAAAAIPSAVTAETGWVGVRVPSHSLARALLRAAAVPVVAPSANRFGHVSPTSAAHVQADLGGHSLLILKEKEEHHAGQG-ACEIGIESTVAKV-DAREG--RVTILRAGAVTCSQLESALRGKGVEVVVKGHARQQEEQPKAKAHGEAGGDVMPKELRTEDLTNDENMPQIAPGQCLKHYAPDRPTYLLS-ALQATESWVDLLAGRAVILDMGGRLQRLKGLAAHYMDLSEAGDVREAAAGLFQALRWAESVDGGKGKLESEEDLLVLIVDLRREGNRREGQGKTAEGEDAEFAVALIDRIMRSASG 556
            T+  S  TS   P I+A++ +D+   G+ LR G LVAFPTETVYGLG +A   ++V ++F  K RPLTDPLIVHV +  +A+S++                            K+E  +LS L + FWPGPLTLVA A + +PS + A TG+   R PSHS ARALL AA VP+ APSAN+FGHVSPT+A HV  DL    + IL    E    +G  C++G+ESTVAK+ + +EG   +T+LR GAV+   L+ +L G  VEVV K                        K    +D+ N      +APGQ ++HY+P+ P++LLS A   +E   +LL+  +V++D GG+L   K     Y DL+  G    AA  +F  LRWAE V G            VL  +L    +  E              +A+ DR+ R+ASG
Sbjct:   15 TIDNSVDTSKPRPQIKAKILNDISVCGERLRLGELVAFPTETVYGLGCHALDVEAVAKVFAAKERPLTDPLIVHVLEPRDAFSLW----------------------------KQENPILSKLCNDFWPGPLTLVAEANSKVPSTIMAGTGYCACRSPSHSTARALLEAAQVPIAAPSANKFGHVSPTTAQHVFDDLQYEDVWIL----ETEGQEGPCCDVGVESTVAKLEETQEGGYLLTVLRQGAVSVHTLKDSLTGLPVEVVAKL-----------------------KRATKDDVAN------VAPGQTIRHYSPNIPSFLLSPACVKSELRAELLS-HSVVIDYGGQLAHWKDHCLAYRDLTPDGSSSAAAQTVFDTLRWAEQVPGAS---------YVLFPELPDSSDALE--------------LAVKDRLTRAASG 373          
The following BLAST results are available for this feature:
BLAST of EWM27868.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110198|gb|EWM27868.1|0.000e+0100.00DHBP synthase RibB-like alpha/beta domain protein ... [more]
gi|553195458|ref|XP_005856152.1|0.000e+0100.00sua5 family protein [Nannochloropsis gaditana CCMP... [more]
gi|673020262|ref|XP_008864092.1|1.322e-7939.95Sua5/YciO/YrdC/YwlC family protein [Aphanomyces in... [more]
gi|813114047|ref|XP_012195360.1|2.184e-7940.86hypothetical protein SPRG_01602 [Saprolegnia paras... [more]
gi|1173952368|gb|OQS00077.1|2.914e-7939.73hypothetical protein THRCLA_06252 [Thraustotheca c... [more]
gi|669160824|ref|XP_008615974.1|3.207e-7940.89hypothetical protein SDRG_11703 [Saprolegnia dicli... [more]
gi|698782427|ref|XP_009824257.1|7.455e-7738.32Sua5/YciO/YrdC/YwlC family protein [Aphanomyces as... [more]
gi|1173943397|gb|OQR92256.1|7.724e-7739.72hypothetical protein ACHHYP_03913 [Achlya hypogyna... [more]
gi|1013934637|gb|KYQ88349.1|2.473e-7634.44hypothetical protein DLAC_11049 [Dictyostelium lac... [more]
gi|1210524262|dbj|GAX16991.1|1.975e-7538.51hypothetical protein FisN_5Hh370 [Fistulifera sola... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2809rna2809Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications