EWM27880.1, cds2788 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|585110211|gb|EWM27880.1| (atpase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 966.066 bits (2496), Expect = 0.000e+0 Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYSNKRKDGLVFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIEREYGEAEGGSGRKSYSSQRRNKRKREEEGEAAGEDEEDEDEMEIEDDEMEDEGEEDYGQDEESLASGVVSESTQKSTRSKEGSGMHKKKWSY 475
MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYSNKRKDGLVFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIEREYGEAEGGSGRKSYSSQRRNKRKREEEGEAAGEDEEDEDEMEIEDDEMEDEGEEDYGQDEESLASGVVSESTQKSTRSKEGSGMHKKKWSY
Sbjct: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYSNKRKDGLVFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIEREYGEAEGGSGRKSYSSQRRNKRKREEEGEAAGEDEEDEDEMEIEDDEMEDEGEEDYGQDEESLASGVVSESTQKSTRSKEGSGMHKKKWSY 475
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|676388043|ref|XP_009037300.1| (hypothetical protein AURANDRAFT_26802 [Aureococcus anophagefferens] >gi|323452052|gb|EGB07927.1| hypothetical protein AURANDRAFT_26802 [Aureococcus anophagefferens]) HSP 1 Score: 294.278 bits (752), Expect = 3.698e-86 Identity = 169/390 (43.33%), Postives = 241/390 (61.79%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTE-ERNLFEFEGKDYSN-KRKDGLVFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPR-RLVLPEH--QFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIERE 385
MV+FGADEI + K TDEDID +L++GE +T+EQ +K Q +VQHNLA F+L E E +LF FEG++Y K GL+ ++ QRER+ NYDVD Y+R A++ +GDK + PR R P H QFFNR L+ L KE LA K+ E RA A + A ++LP +E ++ L++EGF +W+RKDLR + ++ER GR D ++ RETA ETGK + +V Y+ TF + K++ +W+ L D++ +GE R+ R+++I+ AL KVA H P + L +NY +G++WT+EED FL+ +MH + YGNWERIR+EIR + +F FDWFFKSR+ QELN+R D LI+L+E+E
Sbjct: 599 MVRFGADEIFASKAKTITDEDIDTLLKRGEERTQEQASKIQSDVQHNLANFSLTTMEEPEGSLFNFEGENYKGAKGGGGLMINLPQRERK--RNYDVDEYFRDALR-----QGDKPAVAREPRKRRGPPMHDFQFFNRAELEVLLAKEDELAGKKH-------EARADEMEATLETA--------------------YELPVKEAVRKERLLKEGFGDWTRKDLRAFLNAMERHGRGDVDAVARETANETGKTDADVRRYHATFWKKHKDIADWERLVDKVEKGEKRLQRSQEIRSALADKVARHPKPWECLPINYGAS-----RGKVWTEEEDAFLVNMMHTYGYGNWERIRVEIRNAWQFNFDWFFKSRNAQELNRRADLLIRLVEKE 949
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|299115214|emb|CBN74047.1| (Ci-SWI/SNF [Ectocarpus siliculosus]) HSP 1 Score: 287.345 bits (734), Expect = 2.814e-83 Identity = 172/408 (42.16%), Postives = 246/408 (60.29%), Query Frame = 0
Query: 1 MVKFGADEILNAA-GKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDY---SNKRKDGLVFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIEREYGEAE----GGSGRKSYSS 400
MVKFGADEIL +G TDE ID +LRKGE KTEE A+ Q+++QHNL F + D+ + N F FEG D+ G ++ R+R+ NYDV+ YYR+ M G ++ + + + + QF++R L+ L KE LA ++ A IKELR K ++ A E+ A LE+ + +L +EQ+++K L++ F +W+RKD R V + ER GR D +++R+ ET K E V Y F R +EL + + ++I +GE RI R+KQI+ A++ KV+ H NP LT+NY GG +G+++T+EED FLL +MH++ YGNWE IRMEIRK+ +F FDWFFKSR+ EL +RGDTLI+L+E+E E E GG RKS+SS
Sbjct: 660 MVKFGADEILRMDDSQGLTDESIDELLRKGEEKTEETNARIQKDMQHNLLTFKI-DEEDGINTFLFEGSDHREGGAANGTGAFINLPTRQRKS--NYDVNEYYRARMDSNKNIPG-----VRKRKGITMHDFQFYDREALEALQTKEHDLADRKNAIINEIKELRTRCK----RMEAHGGEEEHAAQLEKTASG--LELSSKEQDQKKKLIDNAFGDWNRKDFRAFVAATERHGRDDTEAVVRDVCLETAKTEENVRKYIKVFWKRCRELADHPKIMEKIEKGEKRIFRSKQIRSAIDSKVSRHANPWSDLTINYYGG-----KGKVFTEEEDAFLLNMMHRYGYGNWEVIRMEIRKAWQFRFDWFFKSRNAAELQRRGDTLIRLVEKENEELETTGNGGKKRKSFSS 1048
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|1173929406|gb|OQR82644.1| (hypothetical protein ACHHYP_15723 [Achlya hypogyna]) HSP 1 Score: 266.159 bits (679), Expect = 1.952e-75 Identity = 164/392 (41.84%), Postives = 222/392 (56.63%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYSNKRKDG------LVFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEY-GNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIERE 385
MV+FGADEI NA G TD+DID IL KGE +TE AK ++QHNL F+L T +L++FEG++++ D + RER+ NYDVD YYR + K +P+ V+ + QFF R ++ L +K L R+ +KE +A A A+ GE E ++ LE EL LP E+ +AL EGF +WSR+DL+ + S ERFGRAD+ ++ E A KD V YYD F AR EL ++Q DRI RGE RI RN IKEAL KVA +KNP + + L Y GG + + +T +ED+FL+ +MHK G+W I+ +IR + +F FDWFFKSR+ EL KRG+ L KLIE+E
Sbjct: 663 MVRFGADEIFNAKGSMITDDDIDAILAKGEERTEAMKAKVADDMQHNLKNFSL---TSVSSLYDFEGENFAKDAADAGGVLPSTFIALPARERKK--NYDVDEYYRQQTGQTKPKKSKKPDEENKPKVPVVHDFQFFQRDQMTALLQKRYDLEFARKELAKLVKEAKADE--ARAKSDDGEPCEPKSKALEAELE--AMVLPAEDVAALEALEAEGFGDWSRRDLKQFIASCERFGRADKDAVCLEVATLLAKDVARVAEYYDVFWARAAELEDYQKYMDRIERGEKRIQRNLAIKEALAAKVARYKNPWRDMKLAYPGGY----KSKGFTMDEDVFLICMMHKHGVGGDWGAIKEDIRMAWQFRFDWFFKSRTVLELQKRGEFLTKLIEKE 1041
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|669149880|ref|XP_008610502.1| (hypothetical protein SDRG_06499 [Saprolegnia diclina VS20] >gi|530737498|gb|EQC35740.1| hypothetical protein SDRG_06499 [Saprolegnia diclina VS20]) HSP 1 Score: 255.758 bits (652), Expect = 8.904e-72 Identity = 163/392 (41.58%), Postives = 224/392 (57.14%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYS-NKRKDGLVFD-----MGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEY-GNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIERE 385
MV+FGADEI NA G TD+DID IL KGE +TE AK ++QHNLA F+L T +L++FEG++++ + + G V + RER+ NYDVD YYR + K +P+ V+ + QFF+R R+ L +K + R+ IKE +A Q E + ++ LE EL + D + E +AL +GF +WSR+DL+ V S ERFGR+D+ ++ E A KD V YYD F AR EL +Q DRI RGE RI RN IKEAL KVA +KNP + + L Y GG + + +T +ED+FL+ +MHK G+W I+ +IRK+ +F FDWFFKSR+ EL KRG+ L KLIE+E
Sbjct: 661 MVRFGADEIFNAKGSMITDDDIDAILAKGEERTEAMKAKVVDDMQHNLANFSL---TSVSSLYDFEGENFAKDAAESGSVLPSTFIALPARERKK--NYDVDEYYRQQTGQTKPKKTKKPDEENKPKVPVVHDFQFFDRERMTALLQKRYDVEFARKEHIKLIKEAKADE-----QKQKLEGDDLKSKQLEAELENMVMD--AADVTELEALEADGFGDWSRRDLKQFVASCERFGRSDKDAVCLEVATLLVKDVARVAEYYDVFWARGTELEEYQKYMDRIERGEKRIQRNLAIKEALASKVARYKNPWRDMKLTYPGG----YKSKGFTMDEDVFLICMMHKHGVGGDWVAIKEDIRKAWQFRFDWFFKSRTILELQKRGEFLTKLIEKE 1036
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|224001476|ref|XP_002290410.1| (atpase-like protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973832|gb|EED92162.1| atpase-like protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 248.825 bits (634), Expect = 3.564e-70 Identity = 147/392 (37.50%), Postives = 230/392 (58.67%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDD--TEERNLFEFEGKDYSNKRK-DGLVFDMGQRERRPTMNYDVDSYYRSAMKGG--TGARGDKEGSTKRPRR--LVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNY---QGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLI 382
MVKFGAD+I++ +TDEDID ++ KGE +TE+ A+ Q + QHNLA FTL D T ++ F+F G++Y +K+K D + DMG RER+ + YDV+ Y+R M G +G + + R +R L + Q +NR RL++L +E+ LA ++ G+ E++A ++E+ L+ +F L EQ ER+ L+ EGF +W+RKD + ++E+ GR + A+I+ E ETGK + ++ YY F + L +W + D+I +GE +I R ++IK+ ++ KV +P LT ++ Q G +G + EED FLL +MH+ YG RI++EIR++ +F F+WFFKSRSPQE+ KR D LIK++
Sbjct: 478 MVKFGADQIISGKKGTYTDEDIDALIAKGEKRTEDMQAQLQTDAQHNLASFTLSGDMETSTKDTFDFAGENYRDKKKGDNVFIDMGTRERKRAV-YDVNEYFRETMNTGDSSGMKAHAADAKARKKRKGLYAQDFQLYNRDRLEELAARERELAQSKEDH-------------------LGQIMEEIA-EMEKMLD--QFVLTQPEQAEREQLLSEGFADWNRKDFKCFCNALEKHGRYNLATIIEEIMQETGKADGDIKRYYVAFWLHYRRLTDWNKIIDKIEKGERKIIRLREIKDIIQEKVLEQHSPWDLLTYSWPIMQFKYGPGNRGFSYRQEEDAFLLTMMHRHGYGAARRIQLEIRRAWQFRFNWFFKSRSPQEIQKRCDLLIKVV 846
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|1173958921|gb|OQS05212.1| (hypothetical protein THRCLA_02618 [Thraustotheca clavata]) HSP 1 Score: 249.595 bits (636), Expect = 1.460e-69 Identity = 158/390 (40.51%), Postives = 223/390 (57.18%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYSNKRKDGLV----FDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEY-GNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIERE 385
MV+FGADEI NA G TD+DID IL KGE +TE AK ++QHNL F+L T +L++FEG++++ D ++ + RER+ NYDVD YYR + K +P+ ++ + QF+ R ++ L +K L R+ IKE +A Q E + ++ LE EL + + + E + L EGF +WSR+DL+ + S ERFGR ++ +I ++ A GKD N V YYD F +R EL ++Q DRI RGE RI RN IKEAL KVA +KNP + + L Y GG + + +T +EDIFL+ +MHK G+W I+ +IRK+ +F FDWFFKSR+ EL KRG+ L KLIE+E
Sbjct: 654 MVRFGADEIFNAKGSMITDDDIDAILAKGEERTEAMKAKVADDMQHNLKNFSL---TSVSSLYDFEGENFAKDATDSVLPSTFIALPARERKK--NYDVDEYYRQQTGQTKTKKTKKSEEENKPKVPIVHDFQFYQRDKMTALLQKRYDLEFARKEHIKQIKEAKAEE-----QKQKLEGDDLKSKQLEAELE--KMVMNKADLEALEELEREGFGDWSRRDLKHFIASCERFGRNEKDAICQDVAVVLGKDINRVIQYYDVFWSRGSELEDYQKYMDRIERGERRIQRNLAIKEALAAKVARYKNPWRDMKLTYPGG----YKSKGFTMDEDIFLICMMHKHGVGGDWVAIKEDIRKAWQFRFDWFFKSRTVLELQKRGEFLTKLIEKE 1027
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|673039085|ref|XP_008873503.1| (hypothetical protein H310_09257 [Aphanomyces invadans] >gi|574470933|gb|ETV97942.1| hypothetical protein H310_09257 [Aphanomyces invadans]) HSP 1 Score: 248.054 bits (632), Expect = 7.161e-69 Identity = 155/396 (39.14%), Postives = 229/396 (57.83%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTEERNLFEFEGKDYSNKRKDGL---------VFDMGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTAR-MKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYG-NWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIERE 385
MV+FGADEI NA G TD+DID IL KGE +TE AK +++QHNL F+L + +L+EFEG+ ++ KD L + R+R+ NYDVD YYR + K RP+ ++ + QFF++ ++ L +K + +R+ + IKE ++G+ L EA +D + LE +L ++P ++ +AL +GF +W+R+DL+ LV S E+FGR D+ +I +TA GK+ V YYD F AR EL W +RI +GE R+ RN+ +KEAL K A +KNP + + L Y GG + + +T +ED+FL+ +MH E+G W I+ +IRK+ +F FDWFFKSR+ EL KRG+ L KLIE+E
Sbjct: 668 MVRFGADEIFNAKGSMITDDDIDAILAKGEERTEGMKAKINEDMQHNLKNFSL---SSVSSLYEFEGEKFA---KDALETGGVMPSTFIALPARQRKT--NYDVDEYYRQQTGQTKPKKVKKPDEENRPKVAIVHDFQFFDKDKMIPLLQKRLDVEFQRKEQLKLIKEAKSGK------LDDDEA-KDKLKQLEADLEG--MEMPEVDRLALEALEHDGFGDWTRRDLKQLVASCEKFGRHDKEAICADTATALGKEITRVAEYYDVFWARGADELEEWSKFIERIEKGEKRLTRNQAVKEALAAKCAMYKNPWRDMKLQYPGGY----KSKGFTHDEDVFLVCMMH--EHGFEWNAIKDDIRKAWQFRFDWFFKSRTIVELQKRGEFLTKLIEKE 1040
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|1072224631|gb|OEU09380.1| (SNF2_N-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 243.047 bits (619), Expect = 9.059e-68 Identity = 149/397 (37.53%), Postives = 230/397 (57.93%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDDTE-ERNLFEFEGKDYSNKRKD-GLVFDMGQRERRPTMNYDVDSYYRSAMK-----GGTGARGDKEGSTKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGEAPEDVARDLEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPL-----QTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKFEYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIERE 385
MV+FGAD+IL+ G ++DEDID ++ KGE KT AK Q + QHNLA F LL D + +++ F F+GK+Y + K G ++ QRER+ NYDV+ Y+R M GG A S KR + L + Q FNR RL ++ EKE+ LA +++ + IK++ E PE +E+EL + F L E E+K L EGF +W++KD ++ T +ER GR D + + + ET KD ++ Y+ +F + + + + + +RI++GE +I R +QI++A++ KV H L + +NY G +GR + +EED FL+ +M+++ YG ERIRM IR++ +F FDW+FKSRS E+ KR D ++K+IE+E
Sbjct: 479 MVRFGADQILSGKGGTYSDEDIDALIAKGEEKTSAIQAKLQTDAQHNLADFQLLGDGDGDKDTFSFDGKNYRDSTKTVGNFINLPQRERK--RNYDVNEYFRDTMNPGGPTGGMKAHAADAASKKRKKGPALHDFQLFNRERLNEIAEKERQLAAQKENQ---IKKI-------------NEFPE-----MEKELVN--FKLSAAENSEKKRLQAEGFPDWNKKDFKSFCTGLERHGRYDFSRVASDVHNETNKDPKDIERYFVSFWTNYRRIEDHKKIMERIQKGERKILRLRQIRDAIQEKVERHLEDLIEHSWSKMKINY----GTGTKGRAYQEEEDAFLVAMMYRYGYGAAERIRMSIRRAWQFRFDWYFKSRSALEIQKRCDVIVKIIEKE 846
BLAST of EWM27880.1 vs. NCBI_GenBank
Match: gi|953490328|emb|CEG46649.1| (imitation switch isoform alias nucleosome remodeling factor 140 kda subunit [Plasmopara halstedii]) HSP 1 Score: 241.891 bits (616), Expect = 8.774e-67 Identity = 161/413 (38.98%), Postives = 236/413 (57.14%), Query Frame = 0
Query: 1 MVKFGADEILNAAGKGFTDEDIDLILRKGEAKTEEQTAKYQQNVQHNLAKFTLLDD---TEERNLFEFEGKDYSNKRKDGLVFD-----MGQRERRPTMNYDVDSYYRSAMKGGTGARGDKEGS--TKRPRRLVLPEHQFFNRPRLQQLHEKEQALALKRQARWAFIKELRAGRKAAVAQLAAGE--APEDVARD-----LEEELNDGRFDLPPEEQEERKALMEEGFKNWSRKDLRTLVTSIERFGRADRASILRETAAETGKDENEVTAYYDTFTARMKELPNWQALQDRIRRGEARIARNKQIKEALERKVAGHKNPLQTLTLNYQGGIGKQQQGRLWTDEEDIFLLILMHKF-EYGNWERIRMEIRKSEKFCFDWFFKSRSPQELNKRGDTLIKLIEREYGEAEGGSGR 395
MV+FGADEI NA G TD+DID IL +GE +TE K ++QHNLA F+L D +L+EFEG+ +S +G V + QRER+ NY+ D YYR + K GS K P V+ ++QFF + R+ L K+ + +R+ IKE +A A+ A GE A E+ D LE+ELN+ D + +E L + GF +W+R+DL+ +TS ER+GRAD+A + E + GKD +V YYDTF +R EL + ++I RGE R+ RN+ +KEAL RK + + +PL+ + L+Y G + + + EED+FL+++M+K+ +W IR EIRK+ +F F+WFFKSR+ EL KRG+ L ++IERE E + S +
Sbjct: 607 MVRFGADEIFNARGSMITDDDIDAILARGEERTETMKDKIAADMQHNLANFSLSGDNGNASVSSLYEFEGEVFSKDTNNGHVLPSTFIALPQRERKS--NYNEDEYYRQQTGLSKPKKPKKSGSDAAKVP---VVHDYQFFQQERMVALLTKKTVVENRRKELTRLIKEAKADEARIKARKAKGEDSAEEEEGDDTRSAALEKELNETEMD--ATDLKELDELEKAGFGDWTRRDLKQFITSCERYGRADKARVCEEVSLVLGKDRMQVERYYDTFWSRFTELKDHAKYIEKIERGEKRLERNEVVKEALARKCSRYSHPLRDMRLHYPAGY----KSKGYILEEDVFLVVMMNKYGPLEHWGEIRDEIRKAWQFRFNWFFKSRTIGELQKRGELLTRMIERENDELKSKSTK 1008 The following BLAST results are available for this feature:
BLAST of EWM27880.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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