EWM27886.1, cds2787 (CDS) Nannochloropsis gaditana

Overview
NameEWM27886.1
Unique Namecds2787
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1236698..1236778 +
Alignment locationCM002459.1:1236989..1237081 +
Alignment locationCM002459.1:1237181..1237234 +
Alignment locationCM002459.1:1237364..1237540 +
Alignment locationCM002459.1:1237697..1237815 +
Alignment locationCM002459.1:1238006..1238093 +
Alignment locationCM002459.1:1238332..1238436 +
Alignment locationCM002459.1:1238598..1238695 +
Alignment locationCM002459.1:1238829..1238889 +
Alignment locationCM002459.1:1239026..1239051 +
Alignment locationCM002459.1:1239149..1239152 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27886.1
Productswi snf matrix actin dependent regulator of subfamily member 1
Orig transcript idgnl|cribi|Naga_101388g1.6982.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1236698..1236778 +
CM002459.1supercontigCM002459.1:1236989..1237081 +
CM002459.1supercontigCM002459.1:1237181..1237234 +
CM002459.1supercontigCM002459.1:1237364..1237540 +
CM002459.1supercontigCM002459.1:1237697..1237815 +
CM002459.1supercontigCM002459.1:1238006..1238093 +
CM002459.1supercontigCM002459.1:1238332..1238436 +
CM002459.1supercontigCM002459.1:1238598..1238695 +
CM002459.1supercontigCM002459.1:1238829..1238889 +
CM002459.1supercontigCM002459.1:1239026..1239051 +
CM002459.1supercontigCM002459.1:1239149..1239152 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003677DNA binding
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0043044ATP-dependent chromatin remodeling
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0016589NURF complex
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR029915ISWI
IPR000330SNF2_N
IPR027417P-loop_NTPase
Homology
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|585110218|gb|EWM27886.1| (swi snf matrix actin dependent regulator of subfamily member 1 [Nannochloropsis gaditana])

HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 
Query:    1 MVREYLHSKGARRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            MVREYLHSKGARRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ
Sbjct:    1 MVREYLHSKGARRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|676388041|ref|XP_009037299.1| (hypothetical protein AURANDRAFT_26999, partial [Aureococcus anophagefferens] >gi|323452051|gb|EGB07926.1| hypothetical protein AURANDRAFT_26999, partial [Aureococcus anophagefferens])

HSP 1 Score: 400.979 bits (1029), Expect = 3.223e-133
Identity = 183/285 (64.21%), Postives = 229/285 (80.35%), Query Frame = 0 
Query:   15 FNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNS 299
            F+V+VTSYEG+LKE++ L KIQW+Y++IDEAHRIKN  S+LS++VR+  + FRLLITGTPLQN+L+ELWALLN+++PD+F S   F+ WFS+G                   +NV++KLH VL+PFMLRR+K +VEKDLPPK+E KLYIGMT+MQR WY KIL +D   LN LGG DR++LLNILMQLRKVCNHPYLFEGAEPGPP++DGPH+WE+ GK++L+ KLLP+L AQ SRVLIF QMTR LDILEDY+RL  + YCRIDGST G+DRD+ ++ FN P S
Sbjct:  227 FDVLVTSYEGILKEKAGLMKIQWQYLLIDEAHRIKNPNSSLSKIVRLIPTQFRLLITGTPLQNNLNELWALLNFLLPDIFASEADFETWFSLGDADA--------------KDNVVKKLHTVLRPFMLRRIKKDVEKDLPPKREVKLYIGMTEMQRLWYTKILSKDAHTLNALGGPDRVQLLNILMQLRKVCNHPYLFEGAEPGPPFMDGPHLWENTGKLVLMSKLLPKLMAQDSRVLIFSQMTRMLDILEDYMRLNQYKYCRIDGSTSGDDRDSQMDVFNAPGS 497
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|1214706752|gb|OWZ18250.1| (hypothetical protein PHMEG_0007693 [Phytophthora megakarya])

HSP 1 Score: 410.994 bits (1055), Expect = 2.828e-132
Identity = 183/290 (63.10%), Postives = 234/290 (80.69%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E+S L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  ++ FD WF++ +              E G ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGK+ LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN+P S++
Sbjct:  252 KKDFDALVLSYEVAIIEKSILQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDAEDFDSWFNVDE--------------EEGQENVIKKLHTILRPFLLRRLKSDVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKLTLLHKLLPKLQAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNEPGSSK 527
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|675192009|ref|XP_008904889.1| (hypothetical protein PPTG_11344 [Phytophthora parasitica INRA-310] >gi|568094973|gb|ETN09743.1| hypothetical protein PPTG_11344 [Phytophthora parasitica INRA-310] >gi|970649976|gb|KUF89118.1| hypothetical protein AM588_10003019 [Phytophthora nicotianae])

HSP 1 Score: 411.379 bits (1056), Expect = 3.453e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  281 KQDFDALVLSYEVAIIEKATLQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLRAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 556
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|567962099|gb|ETK87629.1| (hypothetical protein L915_07966 [Phytophthora parasitica])

HSP 1 Score: 411.379 bits (1056), Expect = 3.453e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  281 KQDFDALVLSYEVAIIEKATLQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLRAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 556
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|570328462|gb|ETO76410.1| (hypothetical protein F444_08191 [Phytophthora parasitica P1976])

HSP 1 Score: 411.379 bits (1056), Expect = 3.527e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  281 KQDFDALVLSYEVAIIEKATLQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLRAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 556
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|970644580|gb|KUF85371.1| (global transcription activator SNF2L1 [Phytophthora nicotianae])

HSP 1 Score: 411.379 bits (1056), Expect = 3.758e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  281 KQDFDALVLSYEVAIIEKATLQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLRAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 556
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|566024782|gb|ETI47693.1| (hypothetical protein F443_08140 [Phytophthora parasitica P1569] >gi|568050508|gb|ETM47445.1| hypothetical protein L914_07850 [Phytophthora parasitica])

HSP 1 Score: 411.379 bits (1056), Expect = 3.758e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  281 KQDFDALVLSYEVAIIEKATLQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLRAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 556
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|567990832|gb|ETL41054.1| (hypothetical protein L916_07890 [Phytophthora parasitica] >gi|568020072|gb|ETL94209.1| hypothetical protein L917_07784 [Phytophthora parasitica] >gi|570952240|gb|ETP17497.1| hypothetical protein F441_08113 [Phytophthora parasitica CJ01A1] >gi|570986540|gb|ETP45530.1| hypothetical protein F442_08076 [Phytophthora parasitica P10297])

HSP 1 Score: 411.379 bits (1056), Expect = 3.880e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  281 KQDFDALVLSYEVAIIEKATLQKIKWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKADVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLRAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 556
[Close]
BLAST of EWM27886.1 vs. NCBI_GenBank
Match: gi|695368788|ref|XP_009513889.1| (hypothetical protein PHYSODRAFT_476581 [Phytophthora sojae] >gi|348686800|gb|EGZ26614.1| hypothetical protein PHYSODRAFT_476581 [Phytophthora sojae])

HSP 1 Score: 409.838 bits (1052), Expect = 9.432e-132
Identity = 183/290 (63.10%), Postives = 232/290 (80.00%), Query Frame = 0 
Query:   12 RRPFNVIVTSYEGVLKERSALEKIQWRYVIIDEAHRIKNEKSALSRMVRMFRSTFRLLITGTPLQNDLHELWALLNYIMPDVFDSSDTFDEWFSIGKHSGAGGTGEGVMSGEGGNENVIRKLHQVLKPFMLRRVKGEVEKDLPPKKETKLYIGMTDMQRDWYRKILRRDGAQLNMLGGTDRLRLLNILMQLRKVCNHPYLFEGAEPGPPYIDGPHIWEHCGKMILLDKLLPRLKAQGSRVLIFCQMTRQLDILEDYLRLKGHLYCRIDGSTKGEDRDNAVERFNQPNSAQ 301
            ++ F+ +V SYE  + E++ L+KI+WRY++IDEAHR+KNE S LSR+VR F+   RLLITGTPLQN+LHELWALLN+++PDVF  S+ FD WF++ +  G               ENVI+KLH +L+PF+LRR+K +VE  LPPK ETKLY+G+++MQR+WY ++L RD   LN +GG+DR+RLLNILMQLRKVCNHPYLFEGAEPGPPY +GPH+WE+CGKM LL KLLP+L+AQGSRVLIFCQMT  +DILEDY+R  GH YCR+DGSTKGEDRDN +E FN P S++
Sbjct:  253 KQDFDALVLSYEVAIIEKAILQKIRWRYLLIDEAHRVKNENSKLSRVVREFKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDSWFNVDEQEG--------------QENVIKKLHTILRPFLLRRLKSDVEHSLPPKIETKLYVGLSEMQREWYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENCGKMTLLHKLLPKLQAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMMEEFNAPGSSK 528
The following BLAST results are available for this feature:
BLAST of EWM27886.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110218|gb|EWM27886.1|0.000e+0100.00swi snf matrix actin dependent regulator of subfam... [more]
gi|676388041|ref|XP_009037299.1|3.223e-13364.21hypothetical protein AURANDRAFT_26999, partial [Au... [more]
gi|1214706752|gb|OWZ18250.1|2.828e-13263.10hypothetical protein PHMEG_0007693 [Phytophthora m... [more]
gi|675192009|ref|XP_008904889.1|3.453e-13263.10hypothetical protein PPTG_11344 [Phytophthora para... [more]
gi|567962099|gb|ETK87629.1|3.453e-13263.10hypothetical protein L915_07966 [Phytophthora para... [more]
gi|570328462|gb|ETO76410.1|3.527e-13263.10hypothetical protein F444_08191 [Phytophthora para... [more]
gi|970644580|gb|KUF85371.1|3.758e-13263.10global transcription activator SNF2L1 [Phytophthor... [more]
gi|566024782|gb|ETI47693.1|3.758e-13263.10hypothetical protein F443_08140 [Phytophthora para... [more]
gi|567990832|gb|ETL41054.1|3.880e-13263.10hypothetical protein L916_07890 [Phytophthora para... [more]
gi|695368788|ref|XP_009513889.1|9.432e-13263.10hypothetical protein PHYSODRAFT_476581 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2795rna2795Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications