EWM27903.1, cds2771 (CDS) Nannochloropsis gaditana

Overview
NameEWM27903.1
Unique Namecds2771
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1184589..1184822 -
Alignment locationCM002459.1:1184266..1184379 -
Alignment locationCM002459.1:1183969..1184100 -
Alignment locationCM002459.1:1181849..1183681 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27903.1
Productregulator of nonsense transcripts 2
Orig transcript idgnl|cribi|Naga_100338g6.10098.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1184589..1184822 -
CM002459.1supercontigCM002459.1:1184266..1184379 -
CM002459.1supercontigCM002459.1:1183969..1184100 -
CM002459.1supercontigCM002459.1:1181849..1183681 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR016021MIF4-like_typ_1/2/3
IPR007193Up-fram_suppressor-2
IPR003890MIF4G-like_typ-3
Homology
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|585110241|gb|EWM27903.1| (regulator of nonsense transcripts 2 [Nannochloropsis gaditana])

HSP 1 Score: 1558.5 bits (4034), Expect = 0.000e+0
Identity = 770/770 (100.00%), Postives = 770/770 (100.00%), Query Frame = 0
Query:    1 MNEISMFSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGREEDHRGDRGLPPGGLGFFNRK 770
            MNEISMFSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGREEDHRGDRGLPPGGLGFFNRK
Sbjct:    1 MNEISMFSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGREEDHRGDRGLPPGGLGFFNRK 770          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|585110242|gb|EWM27904.1| (regulator of nonsense transcripts 2 [Nannochloropsis gaditana])

HSP 1 Score: 1258.43 bits (3255), Expect = 0.000e+0
Identity = 625/625 (100.00%), Postives = 625/625 (100.00%), Query Frame = 0
Query:  146 MERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGREEDHRGDRGLPPGGLGFFNRK 770
            MERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGREEDHRGDRGLPPGGLGFFNRK
Sbjct:    1 MERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTLPKLSHQEQGKGGKEGGSGLRFCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRGGEGRGGGRGVGRGSGGSGPSHGREEDHRGDRGLPPGGLGFFNRK 625          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|553188061|ref|XP_005854729.1| (regulator of nonsense transcripts 2, partial [Nannochloropsis gaditana CCMP526] >gi|422294332|gb|EKU21632.1| regulator of nonsense transcripts 2, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 701.819 bits (1810), Expect = 0.000e+0
Identity = 336/338 (99.41%), Postives = 338/338 (100.00%), Query Frame = 0
Query:   78 KRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYV 415
            KRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLE+CGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPL+AYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYV
Sbjct:   82 KRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLESCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLYAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAGGRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYV 419          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1142689855|gb|AQK53781.1| (Regulator of nonsense transcripts UPF2 [Zea mays])

HSP 1 Score: 355.14 bits (910), Expect = 2.039e-106
Identity = 256/776 (32.99%), Postives = 384/776 (49.48%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLL-ELLEDKGRAGG-RDLVQRFATWEEAQ--AAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEE---------VRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL------PKLSHQEQG------KGGKEGGSG-LRF-CMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRG---GEGRGGGRGVGR--GSGGSGPSHGR 749
            F  L+   + ++L+  LF V   S ELLP YSR+VATLS  + ++   L+  L+ EF + + K+   +++ K K ++++GEL KFK+ PP + F+ L ACL+ FS HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LD     L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              +E + + L+  L+  +GK+  +H +A + A L +YH++ AVS+VDEVLEE++ GLE    G + R     LA  R LGE Y+Y  I  ++VFDTLYL + +GH  P                          LDPP D FR  L+I LLQ CG   + KG  K   KL  FL +FQRY+  +G +P D E D+ DL  EL     R     +LV     +EE +  A VE VE E           +   GPS+   +     EE+  +    +S   S++GS    EEEE+   E++  +  + E         V  +E+E  EV      V  K +ED      F++   +++  S+E RK+  R+        NM++P  +       + +  E G      +GG  GGS  +R   ++K+G+  K + +++L+PA +S+    +  + A  EE+  +K+R+L+Y    E   G      W                G+ A  T+          + GRG   G  RGGGR      GSGG   S+GR
Sbjct:  167 FCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCKPPER--SARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPW--------------AECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRR----LAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQ----------------------DVLDPPEDCFRIRLIITLLQTCGHYFS-KGSSK--RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENERSAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSIDGREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQED------FDRELKALLQESLESRKSEARSRLPL----NMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSKVRVKVLMKKGH--KQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNGASQMGNW----------------GQGATSTSSIR-------SGGRGSWDGSARGGGRQRHHITGSGGFYHSYGR 862          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1142689838|gb|AQK53764.1| (Regulator of nonsense transcripts UPF2 [Zea mays])

HSP 1 Score: 355.14 bits (910), Expect = 2.085e-106
Identity = 256/776 (32.99%), Postives = 384/776 (49.48%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLL-ELLEDKGRAGG-RDLVQRFATWEEAQ--AAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEE---------VRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL------PKLSHQEQG------KGGKEGGSG-LRF-CMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRG---GEGRGGGRGVGR--GSGGSGPSHGR 749
            F  L+   + ++L+  LF V   S ELLP YSR+VATLS  + ++   L+  L+ EF + + K+   +++ K K ++++GEL KFK+ PP + F+ L ACL+ FS HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LD     L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              +E + + L+  L+  +GK+  +H +A + A L +YH++ AVS+VDEVLEE++ GLE    G + R     LA  R LGE Y+Y  I  ++VFDTLYL + +GH  P                          LDPP D FR  L+I LLQ CG   + KG  K   KL  FL +FQRY+  +G +P D E D+ DL  EL     R     +LV     +EE +  A VE VE E           +   GPS+   +     EE+  +    +S   S++GS    EEEE+   E++  +  + E         V  +E+E  EV      V  K +ED      F++   +++  S+E RK+  R+        NM++P  +       + +  E G      +GG  GGS  +R   ++K+G+  K + +++L+PA +S+    +  + A  EE+  +K+R+L+Y    E   G      W                G+ A  T+          + GRG   G  RGGGR      GSGG   S+GR
Sbjct:  168 FCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCKPPER--SARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPW--------------AECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRR----LAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQ----------------------DVLDPPEDCFRIRLIITLLQTCGHYFS-KGSSK--RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENERSAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSIDGREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQED------FDRELKALLQESLESRKSEARSRLPL----NMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSKVRVKVLMKKGH--KQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNGASQMGNW----------------GQGATSTSSIR-------SGGRGSWDGSARGGGRQRHHITGSGGFYHSYGR 863          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1040920883|ref|XP_017222675.1| (PREDICTED: regulator of nonsense transcripts UPF2 [Daucus carota subsp. sativus] >gi|1021027106|gb|KZM84893.1| hypothetical protein DCAR_027685 [Daucus carota subsp. sativus])

HSP 1 Score: 361.688 bits (927), Expect = 3.294e-106
Identity = 244/739 (33.02%), Postives = 370/739 (50.07%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLLELLEDKGRAGGRDLVQRFATWEEAQAAVEAVEREEWERK------------------AGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSES----GSESEEEEEEEEEEEEEEEEEEEEEVRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL---PKLSHQEQGKGGKEGGSGLR-----------FCMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVE-----------------GGEGGEDGWGWEEEG 691
            F  ++   S ++L+  LF+VP  S ELLP YSR+VATLS  + ++   L++ L+ EF + L K+   +++ K + ++++GEL KFKI P  + F+ L ACL+ F+ HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LDP    L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              SE E + L+  ++  RGK+  +H +A + AGL +YH+  AVS+VDEVLEE++ GLE    G + R     +A  R LGE YNY  +  +++FDTLYL L +GH                             LDPP D FR  +VI LL+ CG     +G  K   KL  FL +FQRY+  +G VP D E D+ DL         A  R  + R+++ EE  AA+  +  EE ERK                  +G  G ++  G  ++ G VK   E  E +T   ++   S++    G   EEE +EE  +E  + EE+  +      +E++ V V  ++   T+ D   EA F++ F +++  S+E RK  +RA  T     NM++P  +   P   H  +G  G+ G   L              ++KRG+  K + KE+ +P  ++L    +  + A  EE+  +K+ VL+Y    E                 GG     G  W+  G
Sbjct:  496 FCYVNSKSSRKKLVRALFSVPRTSLELLPYYSRMVATLSTCMKDVSSMLIQLLEEEFNFLLNKKDQMNIETKIRNIRFIGELCKFKIAPAGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETAVRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPER--SARVSKVRPPLHQYIRKLLFSDLDKSSIEHVLRQLRKLPW--------------SECEPYLLKCFMKVHRGKYGQIHLIASLTAGLSRYHDEFAVSVVDEVLEEIRVGLELNDYGMQQRR----IAHMRFLGELYNYEHVDSSVIFDTLYLILVFGHGTAEEDV----------------------LDPPEDCFRIRMVITLLETCGHYF-DRGSSK--RKLDRFLIHFQRYILSKGAVPLDIEFDLQDLF--------ADLRPNMTRYSSVEELDAALAVL--EEHERKNLSEKNNTEKHLDTEKVSSGQLGRSSVNGQMLSDG-VKANGEAHEEATEDTDTDSGSDTIGPAGHYDEEELDEENHDETHDSEEDYSDGGDNASDEDDEVRVRQKI---TKVDPLEEADFDREFRALMQESLESRKLELRARPTL----NMMIPMNIFEGPTKDHHGRGVEGESGDDTLDEEAGGSKEVRVKVLVKRGS--KQQTKEMFIPRDSTLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHG 1169          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1142689829|gb|AQK53755.1| (Regulator of nonsense transcripts UPF2 [Zea mays])

HSP 1 Score: 354.369 bits (908), Expect = 4.946e-106
Identity = 256/776 (32.99%), Postives = 384/776 (49.48%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLL-ELLEDKGRAGG-RDLVQRFATWEEAQ--AAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEE---------VRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL------PKLSHQEQG------KGGKEGGSG-LRF-CMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRG---GEGRGGGRGVGR--GSGGSGPSHGR 749
            F  L+   + ++L+  LF V   S ELLP YSR+VATLS  + ++   L+  L+ EF + + K+   +++ K K ++++GEL KFK+ PP + F+ L ACL+ FS HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LD     L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              +E + + L+  L+  +GK+  +H +A + A L +YH++ AVS+VDEVLEE++ GLE    G + R     LA  R LGE Y+Y  I  ++VFDTLYL + +GH  P                          LDPP D FR  L+I LLQ CG   + KG  K   KL  FL +FQRY+  +G +P D E D+ DL  EL     R     +LV     +EE +  A VE VE E           +   GPS+   +     EE+  +    +S   S++GS    EEEE+   E++  +  + E         V  +E+E  EV      V  K +ED      F++   +++  S+E RK+  R+        NM++P  +       + +  E G      +GG  GGS  +R   ++K+G+  K + +++L+PA +S+    +  + A  EE+  +K+R+L+Y    E   G      W                G+ A  T+          + GRG   G  RGGGR      GSGG   S+GR
Sbjct:  187 FCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCKPPER--SARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPW--------------AECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRR----LAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQ----------------------DVLDPPEDCFRIRLIITLLQTCGHYFS-KGSSK--RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENERSAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSIDGREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQED------FDRELKALLQESLESRKSEARSRLPL----NMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSKVRVKVLMKKGH--KQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNGASQMGNW----------------GQGATSTSSIR-------SGGRGSWDGSARGGGRQRHHITGSGGFYHSYGR 882          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1142689843|gb|AQK53769.1| (Regulator of nonsense transcripts UPF2 [Zea mays])

HSP 1 Score: 355.14 bits (910), Expect = 5.222e-106
Identity = 256/776 (32.99%), Postives = 384/776 (49.48%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLL-ELLEDKGRAGG-RDLVQRFATWEEAQ--AAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEE---------VRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL------PKLSHQEQG------KGGKEGGSG-LRF-CMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRG---GEGRGGGRGVGR--GSGGSGPSHGR 749
            F  L+   + ++L+  LF V   S ELLP YSR+VATLS  + ++   L+  L+ EF + + K+   +++ K K ++++GEL KFK+ PP + F+ L ACL+ FS HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LD     L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              +E + + L+  L+  +GK+  +H +A + A L +YH++ AVS+VDEVLEE++ GLE    G + R     LA  R LGE Y+Y  I  ++VFDTLYL + +GH  P                          LDPP D FR  L+I LLQ CG   + KG  K   KL  FL +FQRY+  +G +P D E D+ DL  EL     R     +LV     +EE +  A VE VE E           +   GPS+   +     EE+  +    +S   S++GS    EEEE+   E++  +  + E         V  +E+E  EV      V  K +ED      F++   +++  S+E RK+  R+        NM++P  +       + +  E G      +GG  GGS  +R   ++K+G+  K + +++L+PA +S+    +  + A  EE+  +K+R+L+Y    E   G      W                G+ A  T+          + GRG   G  RGGGR      GSGG   S+GR
Sbjct:  221 FCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCKPPER--SARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPW--------------AECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRR----LAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQ----------------------DVLDPPEDCFRIRLIITLLQTCGHYFS-KGSSK--RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENERSAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSIDGREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQED------FDRELKALLQESLESRKSEARSRLPL----NMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSKVRVKVLMKKGH--KQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNGASQMGNW----------------GQGATSTSSIR-------SGGRGSWDGSARGGGRQRHHITGSGGFYHSYGR 916          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1142689857|gb|AQK53783.1| (Regulator of nonsense transcripts UPF2 [Zea mays])

HSP 1 Score: 354.755 bits (909), Expect = 5.293e-106
Identity = 256/776 (32.99%), Postives = 384/776 (49.48%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLL-ELLEDKGRAGG-RDLVQRFATWEEAQ--AAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEE---------VRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL------PKLSHQEQG------KGGKEGGSG-LRF-CMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRG---GEGRGGGRGVGR--GSGGSGPSHGR 749
            F  L+   + ++L+  LF V   S ELLP YSR+VATLS  + ++   L+  L+ EF + + K+   +++ K K ++++GEL KFK+ PP + F+ L ACL+ FS HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LD     L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              +E + + L+  L+  +GK+  +H +A + A L +YH++ AVS+VDEVLEE++ GLE    G + R     LA  R LGE Y+Y  I  ++VFDTLYL + +GH  P                          LDPP D FR  L+I LLQ CG   + KG  K   KL  FL +FQRY+  +G +P D E D+ DL  EL     R     +LV     +EE +  A VE VE E           +   GPS+   +     EE+  +    +S   S++GS    EEEE+   E++  +  + E         V  +E+E  EV      V  K +ED      F++   +++  S+E RK+  R+        NM++P  +       + +  E G      +GG  GGS  +R   ++K+G+  K + +++L+PA +S+    +  + A  EE+  +K+R+L+Y    E   G      W                G+ A  T+          + GRG   G  RGGGR      GSGG   S+GR
Sbjct:  195 FCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCKPPER--SARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPW--------------AECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRR----LAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQ----------------------DVLDPPEDCFRIRLIITLLQTCGHYFS-KGSSK--RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENERSAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSIDGREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQED------FDRELKALLQESLESRKSEARSRLPL----NMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSKVRVKVLMKKGH--KQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNGASQMGNW----------------GQGATSTSSIR-------SGGRGSWDGSARGGGRQRHHITGSGGFYHSYGR 890          
BLAST of EWM27903.1 vs. NCBI_GenBank
Match: gi|1142689845|gb|AQK53771.1| (Regulator of nonsense transcripts UPF2 [Zea mays])

HSP 1 Score: 355.91 bits (912), Expect = 7.380e-106
Identity = 256/776 (32.99%), Postives = 384/776 (49.48%), Query Frame = 0
Query:    7 FSALSLLPSLQRLLALLFAVPWQSQELLPQYSRVVATLSPLLPEMGPSLVRELQREFRYFLRKRPNSHLDMKRKTVKYVGELVKFKICPPIVPFTFLNACLEAFSRHNVELACALLETCGRFLFLTPHTHTRLKGYLSTMERLKRVKSLDPTLEVLIDNACLICNPPSQRTTTRQTVLLPPLHAYLRFLLFERLSPKNTDDVLYSLRKFPWKTPRGGAPAEATGLSELEVFFLRSVLQAARGKFHALHALADVVAGLGKYHENMAVSMVDEVLEELKRGLETAG-GRRDRDTQGFLALSRLLGEFYNYNLIPHALVFDTLYLFLHYGHEVPPHPSLPSSIPPSFPPYVTHDPRILTPLDPPADTFRCHLVINLLQACGPLLAGKGHEKVRGKLSLFLTYFQRYLFCRGYVPPDTENDVLDLL-ELLEDKGRAGG-RDLVQRFATWEEAQ--AAVEAVEREEWERKAGSAGENASGGPSIAVGAVKMVVEEDESSTSTGESTHSSESGSESEEEEEEEEEEEEEEEEEEEEE---------VRGEEEEEEEVVAVHPRVPLKTEEDLETEAVFEKAFASMVMHSVEERKTNVRAGATSVSVDNMVLPTTL------PKLSHQEQG------KGGKEGGSG-LRF-CMLKRGNRGKLEAKELLVPAYTSLATQIRSHQDAAKEERDKLKQRVLQYESMVEGGEGGEDGWGWEEEGELERLQNRTLTEGEKARLTALAARKRAQRLTRGRG---GEGRGGGRGVGR--GSGGSGPSHGR 749
            F  L+   + ++L+  LF V   S ELLP YSR+VATLS  + ++   L+  L+ EF + + K+   +++ K K ++++GEL KFK+ PP + F+ L ACL+ FS HN+++AC LLETCGRFL+ +P T  R+   L  + RLK VK+LD     L++NA  +C PP +  + R + + PPLH Y+R LLF  L   + + VL  LRK PW              +E + + L+  L+  +GK+  +H +A + A L +YH++ AVS+VDEVLEE++ GLE    G + R     LA  R LGE Y+Y  I  ++VFDTLYL + +GH  P                          LDPP D FR  L+I LLQ CG   + KG  K   KL  FL +FQRY+  +G +P D E D+ DL  EL     R     +LV     +EE +  A VE VE E           +   GPS+   +     EE+  +    +S   S++GS    EEEE+   E++  +  + E         V  +E+E  EV      V  K +ED      F++   +++  S+E RK+  R+        NM++P  +       + +  E G      +GG  GGS  +R   ++K+G+  K + +++L+PA +S+    +  + A  EE+  +K+R+L+Y    E   G      W                G+ A  T+          + GRG   G  RGGGR      GSGG   S+GR
Sbjct:  262 FCYLNSKANRKKLVRALFNVNRTSLELLPYYSRLVATLSTCMKDVPSMLLSMLEEEFNFLINKKDQINIETKIKNIRFIGELCKFKMAPPALVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDSRHSTLVENAYYLCKPPER--SARISKVRPPLHQYIRKLLFSDLDKSSVEHVLRQLRKLPW--------------AECQQYLLKCFLKVHKGKYSQVHLIALLTASLSRYHDDFAVSVVDEVLEEIRVGLELNDYGMQQRR----LAHMRFLGELYSYKHIDSSVVFDTLYLIIVFGHGTPEQ----------------------DVLDPPEDCFRIRLIITLLQTCGHYFS-KGSSK--RKLDKFLLHFQRYIISKGPLPLDIEFDIQDLFGELRPTMSRYSSIEELVAALVEFEENERSAPVEKVENERHSDNESQKRHSRDAGPSVNGESAANGTEENGKAHEVADSESYSDTGSIDGREEEEDILSEDKSNDGSDNEGDDEDDGIPVVSDEDENVEVRQKVMNVDPKEQED------FDRELKALLQESLESRKSEARSRLPL----NMMVPMNVLEGSKDSRATESESGEETVDEEGGNAGGSSKVRVKVLMKKGH--KQQTRQMLIPADSSIVQSTKQQEAAELEEKQSIKRRILEYNEREEELNGASQMGNW----------------GQGATSTSSIR-------SGGRGSWDGSARGGGRQRHHITGSGGFYHSYGR 957          
The following BLAST results are available for this feature:
BLAST of EWM27903.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110241|gb|EWM27903.1|0.000e+0100.00regulator of nonsense transcripts 2 [Nannochlorops... [more]
gi|585110242|gb|EWM27904.1|0.000e+0100.00regulator of nonsense transcripts 2 [Nannochlorops... [more]
gi|553188061|ref|XP_005854729.1|0.000e+099.41regulator of nonsense transcripts 2, partial [Nann... [more]
gi|1142689855|gb|AQK53781.1|2.039e-10632.99Regulator of nonsense transcripts UPF2 [Zea mays][more]
gi|1142689838|gb|AQK53764.1|2.085e-10632.99Regulator of nonsense transcripts UPF2 [Zea mays][more]
gi|1040920883|ref|XP_017222675.1|3.294e-10633.02PREDICTED: regulator of nonsense transcripts UPF2 ... [more]
gi|1142689829|gb|AQK53755.1|4.946e-10632.99Regulator of nonsense transcripts UPF2 [Zea mays][more]
gi|1142689843|gb|AQK53769.1|5.222e-10632.99Regulator of nonsense transcripts UPF2 [Zea mays][more]
gi|1142689857|gb|AQK53783.1|5.293e-10632.99Regulator of nonsense transcripts UPF2 [Zea mays][more]
gi|1142689845|gb|AQK53771.1|7.380e-10632.99Regulator of nonsense transcripts UPF2 [Zea mays][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2779rna2779Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications